RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 SH2D4AQ9H788 454 aa23.07■■□□□ 1.28
CAPN1-211ENST00000527739 RBM27Q9P2N5 1060 aaKnown RBP23.07■■□□□ 1.28
CAPN1-211ENST00000527739 SGPL1O95470 568 aa23.06■■□□□ 1.28
CAPN1-211ENST00000527739 TFRCP02786 760 aaKnown RBP23.06■■□□□ 1.28
CAPN1-211ENST00000527739 GIMAP6Q6P9H5 292 aa23.06■■□□□ 1.28
CAPN1-211ENST00000527739 POTEEQ6S8J3 1075 aa23.06■■□□□ 1.28
CAPN1-211ENST00000527739 GPR142Q7Z601 462 aa23.06■■□□□ 1.28
CAPN1-211ENST00000527739 PLEKHH3Q7Z736 793 aa23.06■■□□□ 1.28
CAPN1-211ENST00000527739 DEFB118Q96PH6 123 aa23.06■■□□□ 1.28
CAPN1-211ENST00000527739 SEC62Q99442 399 aaKnown RBP23.06■■□□□ 1.28
CAPN1-211ENST00000527739 RANBP2P49792 3224 aaKnown RBP23.05■■□□□ 1.28
CAPN1-211ENST00000527739 CNMDO75829 334 aa23.05■■□□□ 1.28
CAPN1-211ENST00000527739 FARP2O94887 1054 aaPredicted RBP23.05■■□□□ 1.28
CAPN1-211ENST00000527739 HMGCRP04035 888 aa23.05■■□□□ 1.28
CAPN1-211ENST00000527739 COG2Q14746 738 aa23.05■■□□□ 1.28
CAPN1-211ENST00000527739 SBK1Q52WX2 424 aa23.05■■□□□ 1.28
CAPN1-211ENST00000527739 RWDD1Q9H446 243 aaPredicted RBP23.05■■□□□ 1.28
CAPN1-211ENST00000527739 HOXC10Q9NYD6 342 aa23.05■■□□□ 1.28
CAPN1-211ENST00000527739 DDX60LQ5H9U9 1706 aaKnown RBP23.05■■□□□ 1.28
CAPN1-211ENST00000527739 SPDYE16A6NNV3 312 aaPredicted RBP23.04■■□□□ 1.28
CAPN1-211ENST00000527739 PATL2C9JE40 543 aaKnown RBP23.04■■□□□ 1.28
CAPN1-211ENST00000527739 EEF2P13639 858 aaKnown RBP23.04■■□□□ 1.28
CAPN1-211ENST00000527739 KIAA1755Q5JYT7 1200 aa23.04■■□□□ 1.28
CAPN1-211ENST00000527739 B4GALNT3Q6L9W6 998 aa23.04■■□□□ 1.28
CAPN1-211ENST00000527739 SIAH1Q8IUQ4 282 aa23.04■■□□□ 1.28
CAPN1-211ENST00000527739 SOCS4Q8WXH5 440 aa23.04■■□□□ 1.28
CAPN1-211ENST00000527739 HTATIP2Q9BUP3 242 aa23.04■■□□□ 1.28
CAPN1-211ENST00000527739 NACAP1Q9BZK3 213 aa23.04■■□□□ 1.28
CAPN1-211ENST00000527739 KANSL2Q9H9L4 492 aa23.04■■□□□ 1.28
CAPN1-211ENST00000527739 BTBD7Q9P203 1132 aa23.04■■□□□ 1.28
CAPN1-211ENST00000527739 TMX2Q9Y320 296 aa23.04■■□□□ 1.28
CAPN1-211ENST00000527739 TRIM32Q13049 653 aa23.03■■□□□ 1.28
CAPN1-211ENST00000527739 AAMPQ13685 434 aa23.03■■□□□ 1.28
CAPN1-211ENST00000527739 IFNL3Q8IZI9 196 aa23.03■■□□□ 1.28
CAPN1-211ENST00000527739 EXOC6Q8TAG9 804 aa23.03■■□□□ 1.28
CAPN1-211ENST00000527739 VCPKMTQ9H867 229 aa23.03■■□□□ 1.28
CAPN1-211ENST00000527739 EPB41L4AQ9HCS5 686 aaPredicted RBP23.03■■□□□ 1.28
CAPN1-211ENST00000527739 DOCK3Q8IZD9 2030 aa23.03■■□□□ 1.28
CAPN1-211ENST00000527739 FLOT1O75955 427 aa23.02■■□□□ 1.28
CAPN1-211ENST00000527739 RGS2P41220 211 aa23.02■■□□□ 1.28
CAPN1-211ENST00000527739 ZMYM1Q5SVZ6 1142 aa23.02■■□□□ 1.28
CAPN1-211ENST00000527739 LPAR1Q92633 364 aa23.02■■□□□ 1.28
CAPN1-211ENST00000527739 LNPKQ9C0E8 428 aa23.02■■□□□ 1.28
CAPN1-211ENST00000527739 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.02■■□□□ 1.28
CAPN1-211ENST00000527739 PRDM1O75626 825 aa23.01■■□□□ 1.27
CAPN1-211ENST00000527739 ZKSCAN1P17029 563 aaPredicted RBP23.01■■□□□ 1.27
CAPN1-211ENST00000527739 PDE1AP54750 535 aa23.01■■□□□ 1.27
CAPN1-211ENST00000527739 PLS1Q14651 629 aa23.01■■□□□ 1.27
CAPN1-211ENST00000527739 LBX2Q6XYB7 198 aa23.01■■□□□ 1.27
CAPN1-211ENST00000527739 ZNF444Q8N0Y2 327 aaPredicted RBP23.01■■□□□ 1.27
CAPN1-211ENST00000527739 TRIB2Q92519 343 aa23.01■■□□□ 1.27
CAPN1-211ENST00000527739 PRO3102Q9H379 93 aa23.01■■□□□ 1.27
CAPN1-211ENST00000527739 HMX1Q9NP08 348 aaPredicted RBP23.01■■□□□ 1.27
CAPN1-211ENST00000527739 IVNS1ABPQ9Y6Y0 642 aa23.01■■□□□ 1.27
CAPN1-211ENST00000527739 RASA1P20936 1047 aa23■■□□□ 1.27
CAPN1-211ENST00000527739 EVI5LQ96CN4 794 aa23■■□□□ 1.27
CAPN1-211ENST00000527739 NAPBQ9H115 298 aa23■■□□□ 1.27
CAPN1-211ENST00000527739 ZNF287Q9HBT7 754 aa23■■□□□ 1.27
CAPN1-211ENST00000527739 GOPCQ9HD26 462 aa23■■□□□ 1.27
CAPN1-211ENST00000527739 PAK6Q9NQU5 681 aaPredicted RBP23■■□□□ 1.27
CAPN1-211ENST00000527739 STAP2Q9UGK3 403 aa23■■□□□ 1.27
CAPN1-211ENST00000527739 SUPT16HQ9Y5B9 1047 aaKnown RBP23■■□□□ 1.27
CAPN1-211ENST00000527739 SALL3Q9BXA9 1300 aa23■■□□□ 1.27
CAPN1-211ENST00000527739 XRCC5P13010 732 aaKnown RBP22.99■■□□□ 1.27
CAPN1-211ENST00000527739 DSG3P32926 999 aa22.99■■□□□ 1.27
CAPN1-211ENST00000527739 MAP2K5Q13163 448 aa22.99■■□□□ 1.27
CAPN1-211ENST00000527739 MORN1Q5T089 497 aa22.99■■□□□ 1.27
CAPN1-211ENST00000527739 CCDC129Q6ZRS4 1044 aa22.99■■□□□ 1.27
CAPN1-211ENST00000527739 TRMT44Q8IYL2 757 aaKnown RBP22.99■■□□□ 1.27
CAPN1-211ENST00000527739 BAZ2AQ9UIF9 1905 aaKnown RBP22.99■■□□□ 1.27
CAPN1-211ENST00000527739 RPTORQ8N122 1335 aa22.99■■□□□ 1.27
CAPN1-211ENST00000527739 SLC15A5A6NIM6 579 aa22.98■■□□□ 1.27
CAPN1-211ENST00000527739 WDR46O15213 610 aaKnown RBP22.98■■□□□ 1.27
CAPN1-211ENST00000527739 PRKAR2AP13861 404 aaKnown RBP22.98■■□□□ 1.27
CAPN1-211ENST00000527739 CCL14Q16627 93 aa22.98■■□□□ 1.27
CAPN1-211ENST00000527739 DIS3LQ8TF46 1054 aaKnown RBP22.98■■□□□ 1.27
CAPN1-211ENST00000527739 USP6NLQ92738 828 aa22.98■■□□□ 1.27
CAPN1-211ENST00000527739 ATG4CQ96DT6 458 aa22.98■■□□□ 1.27
CAPN1-211ENST00000527739 APBA2Q99767 749 aa22.98■■□□□ 1.27
CAPN1-211ENST00000527739 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.98■■□□□ 1.27
CAPN1-211ENST00000527739 CRISPLD2Q9H0B8 497 aa22.98■■□□□ 1.27
CAPN1-211ENST00000527739 TRIM6-TRIM34B2RNG4 842 aa22.97■■□□□ 1.27
CAPN1-211ENST00000527739 IGHDP01880 384 aa22.97■■□□□ 1.27
CAPN1-211ENST00000527739 SLC3A2P08195 630 aaKnown RBP22.97■■□□□ 1.27
CAPN1-211ENST00000527739 PTPREP23469 700 aa22.97■■□□□ 1.27
CAPN1-211ENST00000527739 MOV10L1Q9BXT6 1211 aaKnown RBP22.97■■□□□ 1.27
CAPN1-211ENST00000527739 SPATC1LQ9H0A9 340 aa22.97■■□□□ 1.27
CAPN1-211ENST00000527739 CLIP2Q9UDT6 1046 aa22.97■■□□□ 1.27
CAPN1-211ENST00000527739 NR2E3Q9Y5X4 410 aa22.97■■□□□ 1.27
CAPN1-211ENST00000527739 MYH7P12883 1935 aa22.96■■□□□ 1.27
CAPN1-211ENST00000527739 PDE4BQ07343 736 aa22.96■■□□□ 1.27
CAPN1-211ENST00000527739 FAM83BQ5T0W9 1011 aa22.96■■□□□ 1.27
CAPN1-211ENST00000527739 MB21D1Q8N884 522 aa22.96■■□□□ 1.27
CAPN1-211ENST00000527739 RILPL2Q969X0 211 aa22.96■■□□□ 1.27
CAPN1-211ENST00000527739 PAWRQ96IZ0 340 aaKnown RBP22.96■■□□□ 1.27
CAPN1-211ENST00000527739 ALPK3Q96L96 1907 aa22.96■■□□□ 1.27
CAPN1-211ENST00000527739 PLXNB2O15031 1838 aa22.95■■□□□ 1.26
CAPN1-211ENST00000527739 ERCC3P19447 782 aa22.95■■□□□ 1.26
CAPN1-211ENST00000527739 PPARAQ07869 468 aa22.95■■□□□ 1.26
CAPN1-211ENST00000527739 CACNB2Q08289 660 aaPredicted RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms