RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 TFAP4Q01664 338 aa17.52■□□□□ 0.4
USH1C-207ENST00000527720 PTPN14Q15678 1187 aa17.52■□□□□ 0.4
USH1C-207ENST00000527720 CRY2Q49AN0 593 aa17.52■□□□□ 0.4
USH1C-207ENST00000527720 PRR5LQ6MZQ0 368 aa17.52■□□□□ 0.4
USH1C-207ENST00000527720 RPGRQ92834 1020 aaKnown RBP17.52■□□□□ 0.4
USH1C-207ENST00000527720 PYM1Q9BRP8 204 aaKnown RBP17.52■□□□□ 0.4
USH1C-207ENST00000527720 BCL11BQ9C0K0 894 aaPredicted RBP17.52■□□□□ 0.4
USH1C-207ENST00000527720 FOCADQ5VW36 1801 aa17.52■□□□□ 0.39
USH1C-207ENST00000527720 ATP2B4P23634 1241 aa17.51■□□□□ 0.39
USH1C-207ENST00000527720 NLRP5P59047 1200 aa17.51■□□□□ 0.39
USH1C-207ENST00000527720 CEP135Q66GS9 1140 aa17.51■□□□□ 0.39
USH1C-207ENST00000527720 FAM177A1Q8N128 213 aaPredicted RBP17.51■□□□□ 0.39
USH1C-207ENST00000527720 SH3RF3Q8TEJ3 882 aaPredicted RBP17.51■□□□□ 0.39
USH1C-207ENST00000527720 FANCLQ9NW38 375 aa17.51■□□□□ 0.39
USH1C-207ENST00000527720 JAG2Q9Y219 1238 aa17.51■□□□□ 0.39
USH1C-207ENST00000527720 MYH1P12882 1939 aa17.51■□□□□ 0.39
USH1C-207ENST00000527720 PSDA5PKW4 1024 aaPredicted RBP17.51■□□□□ 0.39
USH1C-207ENST00000527720 PRR29P0C7W0 189 aa17.51■□□□□ 0.39
USH1C-207ENST00000527720 ERCC5P28715 1186 aaPredicted RBP17.51■□□□□ 0.39
USH1C-207ENST00000527720 SYCP1Q15431 976 aa17.51■□□□□ 0.39
USH1C-207ENST00000527720 SH3RF1Q7Z6J0 888 aa17.51■□□□□ 0.39
USH1C-207ENST00000527720 CCDC112Q8NEF3 446 aa17.51■□□□□ 0.39
USH1C-207ENST00000527720 ZNF287Q9HBT7 754 aa17.51■□□□□ 0.39
USH1C-207ENST00000527720 ST5P78524 1137 aa17.5■□□□□ 0.39
USH1C-207ENST00000527720 GRM4Q14833 912 aa17.5■□□□□ 0.39
USH1C-207ENST00000527720 CFAP100Q494V2 611 aa17.5■□□□□ 0.39
USH1C-207ENST00000527720 USP49Q70CQ1 688 aa17.5■□□□□ 0.39
USH1C-207ENST00000527720 VSTM4Q8IW00 320 aa17.5■□□□□ 0.39
USH1C-207ENST00000527720 PDILTQ8N807 584 aa17.5■□□□□ 0.39
USH1C-207ENST00000527720 PNMA1Q8ND90 353 aa17.5■□□□□ 0.39
USH1C-207ENST00000527720 MKNK2Q9HBH9 465 aa17.5■□□□□ 0.39
USH1C-207ENST00000527720 IL17RBQ9NRM6 502 aa17.5■□□□□ 0.39
USH1C-207ENST00000527720 LRRC37AA6NMS7 1700 aa17.5■□□□□ 0.39
USH1C-207ENST00000527720 USP27XA6NNY8 438 aa17.5■□□□□ 0.39
USH1C-207ENST00000527720 TUBB4AP04350 444 aa17.5■□□□□ 0.39
USH1C-207ENST00000527720 IL1R1P14778 569 aa17.5■□□□□ 0.39
USH1C-207ENST00000527720 SYMPKQ92797 1274 aaKnown RBP17.5■□□□□ 0.39
USH1C-207ENST00000527720 RBM17Q96I25 401 aaKnown RBP17.5■□□□□ 0.39
USH1C-207ENST00000527720 ZNF18P17022 549 aa17.49■□□□□ 0.39
USH1C-207ENST00000527720 PLCD1P51178 756 aa17.49■□□□□ 0.39
USH1C-207ENST00000527720 ZNF174Q15697 407 aa17.49■□□□□ 0.39
USH1C-207ENST00000527720 DHX58Q96C10 678 aa17.49■□□□□ 0.39
USH1C-207ENST00000527720 EPSTI1Q96J88 318 aa17.49■□□□□ 0.39
USH1C-207ENST00000527720 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.49■□□□□ 0.39
USH1C-207ENST00000527720 CCP110O43303 1012 aa17.49■□□□□ 0.39
USH1C-207ENST00000527720 PLCG2P16885 1265 aa17.49■□□□□ 0.39
USH1C-207ENST00000527720 GPSM2P81274 684 aa17.49■□□□□ 0.39
USH1C-207ENST00000527720 PTGDRQ13258 359 aa17.49■□□□□ 0.39
USH1C-207ENST00000527720 ARL6IP4Q66PJ3 421 aaKnown RBP17.49■□□□□ 0.39
USH1C-207ENST00000527720 ZNF444Q8N0Y2 327 aaPredicted RBP17.49■□□□□ 0.39
USH1C-207ENST00000527720 DPF2Q92785 391 aa17.49■□□□□ 0.39
USH1C-207ENST00000527720 GSDMAQ96QA5 445 aa17.49■□□□□ 0.39
USH1C-207ENST00000527720 RTFDC1Q9BY42 306 aaPredicted RBP17.49■□□□□ 0.39
USH1C-207ENST00000527720 CD209Q9NNX6 404 aa17.49■□□□□ 0.39
USH1C-207ENST00000527720 LRRC4BQ9NT99 713 aa17.49■□□□□ 0.39
USH1C-207ENST00000527720 TSPY3P0CV98 308 aa17.48■□□□□ 0.39
USH1C-207ENST00000527720 TSPY8P0CW00 308 aa17.48■□□□□ 0.39
USH1C-207ENST00000527720 GALNT17Q6IS24 598 aa17.48■□□□□ 0.39
USH1C-207ENST00000527720 PODXL2Q9NZ53 605 aa17.48■□□□□ 0.39
USH1C-207ENST00000527720 GGA1Q9UJY5 639 aa17.48■□□□□ 0.39
USH1C-207ENST00000527720 NFE2L3Q9Y4A8 694 aa17.48■□□□□ 0.39
USH1C-207ENST00000527720 LTBP1Q14766 1721 aa17.48■□□□□ 0.39
USH1C-207ENST00000527720 A0A087X0B3 334 aa17.47■□□□□ 0.39
USH1C-207ENST00000527720 BBOX1O75936 387 aa17.47■□□□□ 0.39
USH1C-207ENST00000527720 TOP1P11387 765 aaKnown RBP17.47■□□□□ 0.39
USH1C-207ENST00000527720 GYS1P13807 737 aa17.47■□□□□ 0.39
USH1C-207ENST00000527720 DIXDC1Q155Q3 683 aa17.47■□□□□ 0.39
USH1C-207ENST00000527720 PIK3AP1Q6ZUJ8 805 aa17.47■□□□□ 0.39
USH1C-207ENST00000527720 SLF2Q8IX21 1173 aa17.47■□□□□ 0.39
USH1C-207ENST00000527720 BLIDQ8IZY5 108 aa17.47■□□□□ 0.39
USH1C-207ENST00000527720 TGFBRAP1Q8WUH2 860 aa17.47■□□□□ 0.39
USH1C-207ENST00000527720 PAGE5Q96GU1 130 aa17.47■□□□□ 0.39
USH1C-207ENST00000527720 LZTS2Q9BRK4 669 aa17.47■□□□□ 0.39
USH1C-207ENST00000527720 GPR75-ASB3A0A0A6YYF3 556 aa17.47■□□□□ 0.39
USH1C-207ENST00000527720 WNT7AO00755 349 aa17.47■□□□□ 0.39
USH1C-207ENST00000527720 UFL1O94874 794 aa17.47■□□□□ 0.39
USH1C-207ENST00000527720 SLC27A3Q5K4L6 730 aa17.47■□□□□ 0.39
USH1C-207ENST00000527720 E4F1Q66K89 784 aaPredicted RBP17.47■□□□□ 0.39
USH1C-207ENST00000527720 GRAMD1CQ8IYS0 662 aa17.47■□□□□ 0.39
USH1C-207ENST00000527720 ZNF710Q8N1W2 664 aa17.47■□□□□ 0.39
USH1C-207ENST00000527720 CCDC148Q8NFR7 591 aa17.47■□□□□ 0.39
USH1C-207ENST00000527720 DYNLL2Q96FJ2 89 aa17.47■□□□□ 0.39
USH1C-207ENST00000527720 FAM163AQ96GL9 167 aaPredicted RBP17.47■□□□□ 0.39
USH1C-207ENST00000527720 TMX1Q9H3N1 280 aa17.47■□□□□ 0.39
USH1C-207ENST00000527720 PCDHA4Q9UN74 947 aa17.47■□□□□ 0.39
USH1C-207ENST00000527720 SERPINB2P05120 415 aa17.46■□□□□ 0.39
USH1C-207ENST00000527720 FMR1Q06787 632 aaKnown RBP eCLIP17.46■□□□□ 0.39
USH1C-207ENST00000527720 MEX3CQ5U5Q3 659 aaKnown RBP17.46■□□□□ 0.39
USH1C-207ENST00000527720 IQUBQ8NA54 791 aa17.46■□□□□ 0.39
USH1C-207ENST00000527720 DAGLBQ8NCG7 672 aa17.46■□□□□ 0.39
USH1C-207ENST00000527720 MAD2L2Q9UI95 211 aa17.46■□□□□ 0.39
USH1C-207ENST00000527720 VWA3AA6NCI4 1184 aa17.46■□□□□ 0.39
USH1C-207ENST00000527720 HOXA10P31260 410 aaPredicted RBP17.46■□□□□ 0.39
USH1C-207ENST00000527720 DPYDQ12882 1025 aa17.46■□□□□ 0.39
USH1C-207ENST00000527720 GRIK5Q16478 980 aa17.46■□□□□ 0.39
USH1C-207ENST00000527720 NOM1Q5C9Z4 860 aaKnown RBP17.46■□□□□ 0.39
USH1C-207ENST00000527720 SEPT12Q8IYM1 358 aa17.46■□□□□ 0.39
USH1C-207ENST00000527720 TBC1D22AQ8WUA7 517 aa17.46■□□□□ 0.39
USH1C-207ENST00000527720 TRPC5Q9UL62 973 aaPredicted RBP17.46■□□□□ 0.39
USH1C-207ENST00000527720 RASA1P20936 1047 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms