RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 TMPRSS7Q7RTY8 843 aa12.61□□□□□ -0.39
CTNND1-217ENST00000527599 METTL16Q86W50 562 aaKnown RBP12.61□□□□□ -0.39
CTNND1-217ENST00000527599 ASPNQ9BXN1 380 aa12.61□□□□□ -0.39
CTNND1-217ENST00000527599 KIAA1522Q9P206 1035 aaPredicted RBP12.61□□□□□ -0.39
CTNND1-217ENST00000527599 DDX41Q9UJV9 622 aaKnown RBP12.61□□□□□ -0.39
CTNND1-217ENST00000527599 KCNH3Q9ULD8 1083 aa12.61□□□□□ -0.39
CTNND1-217ENST00000527599 SHISA3A0PJX4 238 aa12.6□□□□□ -0.39
CTNND1-217ENST00000527599 RAG1P15918 1043 aa12.6□□□□□ -0.39
CTNND1-217ENST00000527599 TXKP42681 527 aa12.6□□□□□ -0.39
CTNND1-217ENST00000527599 ZNF165P49910 485 aa12.6□□□□□ -0.39
CTNND1-217ENST00000527599 FYB2Q5VWT5 728 aa12.6□□□□□ -0.39
CTNND1-217ENST00000527599 TSPYL5Q86VY4 417 aaPredicted RBP12.6□□□□□ -0.39
CTNND1-217ENST00000527599 CREG2Q8IUH2 290 aa12.6□□□□□ -0.39
CTNND1-217ENST00000527599 FAM168AQ92567 244 aa12.6□□□□□ -0.39
CTNND1-217ENST00000527599 RALGPS1Q5JS13 557 aa12.59□□□□□ -0.39
CTNND1-217ENST00000527599 OGFOD2Q6N063 350 aa12.59□□□□□ -0.39
CTNND1-217ENST00000527599 SLAMF8Q9P0V8 285 aa12.59□□□□□ -0.39
CTNND1-217ENST00000527599 DNAJC25-GNG10A0A024R161 153 aa12.58□□□□□ -0.4
CTNND1-217ENST00000527599 SCAMP3O14828 347 aaKnown RBP12.58□□□□□ -0.4
CTNND1-217ENST00000527599 NLRC3Q7RTR2 1065 aa12.58□□□□□ -0.4
CTNND1-217ENST00000527599 MRRFQ96E11 262 aaKnown RBP12.58□□□□□ -0.4
CTNND1-217ENST00000527599 ALPK1Q96QP1 1244 aa12.58□□□□□ -0.4
CTNND1-217ENST00000527599 TRIT1Q9H3H1 467 aaKnown RBP12.58□□□□□ -0.4
CTNND1-217ENST00000527599 TMEM40Q8WWA1 233 aa12.57□□□□□ -0.4
CTNND1-217ENST00000527599 GPATCH2Q9NW75 528 aa12.57□□□□□ -0.4
CTNND1-217ENST00000527599 MEIS3P2A8K0S8 358 aa12.56□□□□□ -0.4
CTNND1-217ENST00000527599 GDNFP39905 211 aa12.56□□□□□ -0.4
CTNND1-217ENST00000527599 NME1P15531 152 aaKnown RBP12.55□□□□□ -0.4
CTNND1-217ENST00000527599 NBPF12Q5TAG4 269 aaPredicted RBP12.55□□□□□ -0.4
CTNND1-217ENST00000527599 ADAMTS10Q9H324 1103 aa12.55□□□□□ -0.4
CTNND1-217ENST00000527599 GOLGA2P5Q9HBQ8 144 aa12.55□□□□□ -0.4
CTNND1-217ENST00000527599 DUSP13Q9UII6 198 aa12.55□□□□□ -0.4
CTNND1-217ENST00000527599 ZNRF3Q9ULT6 936 aa12.54□□□□□ -0.4
CTNND1-217ENST00000527599 PCDHA11Q9Y5I1 949 aa12.54□□□□□ -0.4
CTNND1-217ENST00000527599 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.53□□□□□ -0.4
CTNND1-217ENST00000527599 HDLBPQ00341 1268 aaKnown RBP12.53□□□□□ -0.4
CTNND1-217ENST00000527599 ZSWIM9Q86XI8 627 aa12.53□□□□□ -0.4
CTNND1-217ENST00000527599 TMEM192Q8IY95 271 aa12.53□□□□□ -0.4
CTNND1-217ENST00000527599 SLC9A7Q96T83 725 aa12.53□□□□□ -0.4
CTNND1-217ENST00000527599 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.53□□□□□ -0.4
CTNND1-217ENST00000527599 ZNF503-AS2A6NEH8 195 aa12.52□□□□□ -0.41
CTNND1-217ENST00000527599 TNFRSF10CO14798 259 aa12.52□□□□□ -0.41
CTNND1-217ENST00000527599 AFMP43652 599 aa12.52□□□□□ -0.41
CTNND1-217ENST00000527599 ERVFC1P60507 584 aa12.52□□□□□ -0.41
CTNND1-217ENST00000527599 EGR3Q06889 387 aa12.52□□□□□ -0.41
CTNND1-217ENST00000527599 C9orf131Q5VYM1 1079 aa12.52□□□□□ -0.41
CTNND1-217ENST00000527599 TTC6Q86TZ1 520 aa12.52□□□□□ -0.41
CTNND1-217ENST00000527599 ZNF512BQ96KM6 892 aaPredicted RBP12.52□□□□□ -0.41
CTNND1-217ENST00000527599 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.52□□□□□ -0.41
CTNND1-217ENST00000527599 ACRP10323 421 aa12.51□□□□□ -0.41
CTNND1-217ENST00000527599 SNW1Q13573 536 aaKnown RBP12.51□□□□□ -0.41
CTNND1-217ENST00000527599 LRRFIP1Q32MZ4 808 aaKnown RBP12.51□□□□□ -0.41
CTNND1-217ENST00000527599 NBPF9Q3BBW0 867 aa12.51□□□□□ -0.41
CTNND1-217ENST00000527599 TMEM59LQ9UK28 342 aa12.51□□□□□ -0.41
CTNND1-217ENST00000527599 KCNMB1Q16558 191 aa12.5□□□□□ -0.41
CTNND1-217ENST00000527599 TMC3Q7Z5M5 1100 aa12.5□□□□□ -0.41
CTNND1-217ENST00000527599 POU5F2Q8N7G0 328 aa12.5□□□□□ -0.41
CTNND1-217ENST00000527599 CCNFP41002 786 aa12.49□□□□□ -0.41
CTNND1-217ENST00000527599 HK2P52789 917 aa12.49□□□□□ -0.41
CTNND1-217ENST00000527599 RNF4P78317 190 aa12.49□□□□□ -0.41
CTNND1-217ENST00000527599 PAK2Q13177 524 aa12.49□□□□□ -0.41
CTNND1-217ENST00000527599 NMIQ13287 307 aaPredicted RBP12.49□□□□□ -0.41
CTNND1-217ENST00000527599 ZNF654Q8IZM8 581 aa12.49□□□□□ -0.41
CTNND1-217ENST00000527599 SP110Q9HB58 689 aa12.49□□□□□ -0.41
CTNND1-217ENST00000527599 PPT2Q9UMR5 302 aa12.49□□□□□ -0.41
CTNND1-217ENST00000527599 LTKP29376 864 aa12.48□□□□□ -0.41
CTNND1-217ENST00000527599 CHMP4BP1P59074 171 aa12.48□□□□□ -0.41
CTNND1-217ENST00000527599 KIRREL1Q96J84 757 aa12.48□□□□□ -0.41
CTNND1-217ENST00000527599 HDAC8Q9BY41 377 aa12.48□□□□□ -0.41
CTNND1-217ENST00000527599 EBF1Q9UH73 591 aa12.48□□□□□ -0.41
CTNND1-217ENST00000527599 CLEC3AO75596 197 aa12.47□□□□□ -0.41
CTNND1-217ENST00000527599 TEKQ02763 1124 aa12.47□□□□□ -0.41
CTNND1-217ENST00000527599 NT5DC4Q86YG4 428 aa12.47□□□□□ -0.41
CTNND1-217ENST00000527599 LIN37Q96GY3 246 aaPredicted RBP12.47□□□□□ -0.41
CTNND1-217ENST00000527599 SLC6A18Q96N87 628 aa12.47□□□□□ -0.41
CTNND1-217ENST00000527599 FAM86C2PA6NEL3 165 aa12.46□□□□□ -0.41
CTNND1-217ENST00000527599 ZGLP1P0C6A0 271 aa12.46□□□□□ -0.41
CTNND1-217ENST00000527599 RAD51AP2Q09MP3 1159 aa12.46□□□□□ -0.41
CTNND1-217ENST00000527599 SYTL5Q8TDW5 730 aaPredicted RBP12.46□□□□□ -0.41
CTNND1-217ENST00000527599 CCDC120Q96HB5 630 aa12.46□□□□□ -0.41
CTNND1-217ENST00000527599 ZNF281Q9Y2X9 895 aa12.46□□□□□ -0.41
CTNND1-217ENST00000527599 CLEC16AQ2KHT3 1053 aa12.45□□□□□ -0.42
CTNND1-217ENST00000527599 INTS3Q68E01 1043 aaKnown RBP12.45□□□□□ -0.42
CTNND1-217ENST00000527599 USHBP1Q8N6Y0 703 aa12.45□□□□□ -0.42
CTNND1-217ENST00000527599 ENOX1Q8TC92 643 aaKnown RBP12.45□□□□□ -0.42
CTNND1-217ENST00000527599 PRDM14Q9GZV8 571 aa12.45□□□□□ -0.42
CTNND1-217ENST00000527599 GINM1Q9NU53 330 aa12.45□□□□□ -0.42
CTNND1-217ENST00000527599 MINPP1Q9UNW1 487 aa12.45□□□□□ -0.42
CTNND1-217ENST00000527599 HPXP02790 462 aa12.44□□□□□ -0.42
CTNND1-217ENST00000527599 GLI1P08151 1106 aa12.44□□□□□ -0.42
CTNND1-217ENST00000527599 ZNF648Q5T619 568 aaPredicted RBP12.44□□□□□ -0.42
CTNND1-217ENST00000527599 RUFY4Q6ZNE9 571 aa12.44□□□□□ -0.42
CTNND1-217ENST00000527599 FERD3LQ96RJ6 166 aa12.44□□□□□ -0.42
CTNND1-217ENST00000527599 TRHRP34981 398 aaPredicted RBP12.43□□□□□ -0.42
CTNND1-217ENST00000527599 LCE3BQ5TA77 95 aa12.43□□□□□ -0.42
CTNND1-217ENST00000527599 RBBP8NLQ8NC74 664 aaPredicted RBP12.43□□□□□ -0.42
CTNND1-217ENST00000527599 DAGLBQ8NCG7 672 aa12.43□□□□□ -0.42
CTNND1-217ENST00000527599 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.43□□□□□ -0.42
CTNND1-217ENST00000527599 PRAMEF1O95521 474 aa12.42□□□□□ -0.42
CTNND1-217ENST00000527599 IMPDH2P12268 514 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms