RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 MBD4O95243 580 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 CHRNDQ07001 517 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 DDR1Q08345 913 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 WTAPQ15007 396 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 BRD3Q15059 726 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 RAD9BQ6WBX8 426 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 ELOA2Q8IYF1 753 aaPredicted RBP14.18□□□□□ -0.14
CAPN1-208ENST00000527323 FBXO41Q8TF61 875 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 PANX2Q96RD6 677 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 MED15Q96RN5 788 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 UBXN6Q9BZV1 441 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 ADAM21Q9UKJ8 722 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 ADGRG1Q9Y653 693 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 CNTNAP4Q9C0A0 1308 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 THSD7AQ9UPZ6 1657 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 A0A0U1RQJ8 604 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 ERCC5P28715 1186 aaPredicted RBP14.18□□□□□ -0.14
CAPN1-208ENST00000527323 CASP1P29466 404 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 TDO2P48775 406 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 AKAP17AQ02040 695 aaKnown RBP14.18□□□□□ -0.14
CAPN1-208ENST00000527323 RAD51AP2Q09MP3 1159 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 TPTE2Q6XPS3 522 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 TXNRD3Q86VQ6 643 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 MAGEB6Q8N7X4 407 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 CEP112Q8N8E3 955 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 CNBD1Q8NA66 436 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 OXER1Q8TDS5 423 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 ATRIPQ8WXE1 791 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 ARMT1Q9H993 441 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 SRPRBQ9Y5M8 271 aaKnown RBP14.18□□□□□ -0.14
CAPN1-208ENST00000527323 A0A1B0GTH6 734 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 RHOXF2BP0C7M4 288 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 CAPN2P17655 700 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 CCDC152Q4G0S7 254 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 NT5DC1Q5TFE4 455 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 NLRP3Q96P20 1036 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 RHOXF2Q9BQY4 288 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 KRT23Q9C075 422 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 FOXP1Q9H334 677 aaPredicted RBP14.18□□□□□ -0.14
CAPN1-208ENST00000527323 CDC23Q9UJX2 597 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 SERPINB2P05120 415 aa14.17□□□□□ -0.14
CAPN1-208ENST00000527323 IGHMBP2P38935 993 aaKnown RBP14.17□□□□□ -0.14
CAPN1-208ENST00000527323 AKNAD1Q5T1N1 836 aa14.17□□□□□ -0.14
CAPN1-208ENST00000527323 SPATA1Q5VX52 437 aa14.17□□□□□ -0.14
CAPN1-208ENST00000527323 SMYD4Q8IYR2 804 aaPredicted RBP14.17□□□□□ -0.14
CAPN1-208ENST00000527323 CNNM2Q9H8M5 875 aa14.17□□□□□ -0.14
CAPN1-208ENST00000527323 VPS18Q9P253 973 aa14.17□□□□□ -0.14
CAPN1-208ENST00000527323 STK36Q9NRP7 1315 aa14.17□□□□□ -0.14
CAPN1-208ENST00000527323 ACTN4O43707 911 aaKnown RBP14.17□□□□□ -0.14
CAPN1-208ENST00000527323 COBLO75128 1261 aa14.17□□□□□ -0.14
CAPN1-208ENST00000527323 ERLIN1O75477 346 aa14.17□□□□□ -0.14
CAPN1-208ENST00000527323 PDE11AQ9HCR9 933 aa14.17□□□□□ -0.14
CAPN1-208ENST00000527323 ABCF2Q9UG63 623 aa14.17□□□□□ -0.14
CAPN1-208ENST00000527323 CCDC196A0A1B0GTZ2 297 aa14.16□□□□□ -0.14
CAPN1-208ENST00000527323 CTAGE9A4FU28 777 aa14.16□□□□□ -0.14
CAPN1-208ENST00000527323 H3BQF6 201 aa14.16□□□□□ -0.14
CAPN1-208ENST00000527323 TULP2O00295 520 aa14.16□□□□□ -0.14
CAPN1-208ENST00000527323 DEXIO95424 95 aa14.16□□□□□ -0.14
CAPN1-208ENST00000527323 CASP14P31944 242 aa14.16□□□□□ -0.14
CAPN1-208ENST00000527323 MAP3K12Q12852 859 aa14.16□□□□□ -0.14
CAPN1-208ENST00000527323 PRR5LQ6MZQ0 368 aa14.16□□□□□ -0.14
CAPN1-208ENST00000527323 EPSTI1Q96J88 318 aa14.16□□□□□ -0.14
CAPN1-208ENST00000527323 CWC15Q9P013 229 aaKnown RBP14.16□□□□□ -0.14
CAPN1-208ENST00000527323 PRKAB2O43741 272 aa14.16□□□□□ -0.14
CAPN1-208ENST00000527323 PDE8BO95263 885 aa14.16□□□□□ -0.14
CAPN1-208ENST00000527323 UQCRFS1P1P0C7P4 283 aa14.16□□□□□ -0.14
CAPN1-208ENST00000527323 PARP10Q53GL7 1025 aa14.16□□□□□ -0.14
CAPN1-208ENST00000527323 HDXQ7Z353 690 aa14.16□□□□□ -0.14
CAPN1-208ENST00000527323 ZNF579Q8NAF0 562 aaKnown RBP14.16□□□□□ -0.14
CAPN1-208ENST00000527323 STAMQ92783 540 aa14.16□□□□□ -0.14
CAPN1-208ENST00000527323 NAA15Q9BXJ9 866 aaKnown RBP14.16□□□□□ -0.14
CAPN1-208ENST00000527323 SYNRGQ9UMZ2 1314 aa14.16□□□□□ -0.14
CAPN1-208ENST00000527323 TRIM75PA6NK02 468 aa14.16□□□□□ -0.14
CAPN1-208ENST00000527323 MMP10P09238 476 aa14.16□□□□□ -0.14
CAPN1-208ENST00000527323 CCT6AP40227 531 aaKnown RBP14.16□□□□□ -0.14
CAPN1-208ENST00000527323 ANKRD18AQ8IVF6 992 aa14.16□□□□□ -0.14
CAPN1-208ENST00000527323 CRACR2BQ8N4Y2 399 aaPredicted RBP14.16□□□□□ -0.14
CAPN1-208ENST00000527323 NACAP1Q9BZK3 213 aa14.16□□□□□ -0.14
CAPN1-208ENST00000527323 EPB41L4AQ9HCS5 686 aaPredicted RBP14.16□□□□□ -0.14
CAPN1-208ENST00000527323 SBF2Q86WG5 1849 aa14.15□□□□□ -0.14
CAPN1-208ENST00000527323 POTEB2H3BUK9 544 aa14.15□□□□□ -0.14
CAPN1-208ENST00000527323 SLC35F6Q8N357 371 aa14.15□□□□□ -0.14
CAPN1-208ENST00000527323 ZFP91Q96JP5 570 aaPredicted RBP14.15□□□□□ -0.14
CAPN1-208ENST00000527323 CTAGE1Q96RT6 745 aa14.15□□□□□ -0.14
CAPN1-208ENST00000527323 SPEF2Q9C093 1822 aa14.15□□□□□ -0.14
CAPN1-208ENST00000527323 PCNTO95613 3336 aa14.15□□□□□ -0.14
CAPN1-208ENST00000527323 hCG_1642624A0A1W2PR95 340 aa14.15□□□□□ -0.14
CAPN1-208ENST00000527323 EIF3JO75822 258 aaKnown RBP14.15□□□□□ -0.14
CAPN1-208ENST00000527323 CD44P16070 742 aaKnown RBP14.15□□□□□ -0.14
CAPN1-208ENST00000527323 ALX1Q15699 326 aa14.15□□□□□ -0.14
CAPN1-208ENST00000527323 WWC2Q6AWC2 1192 aa14.15□□□□□ -0.14
CAPN1-208ENST00000527323 FANCBQ8NB91 859 aa14.15□□□□□ -0.14
CAPN1-208ENST00000527323 ACRBPQ8NEB7 543 aa14.15□□□□□ -0.14
CAPN1-208ENST00000527323 EXOC4Q96A65 974 aa14.15□□□□□ -0.14
CAPN1-208ENST00000527323 CDC5LQ99459 802 aaKnown RBP14.15□□□□□ -0.14
CAPN1-208ENST00000527323 UBAC1Q9BSL1 405 aa14.15□□□□□ -0.14
CAPN1-208ENST00000527323 PLA2G12BQ9BX93 195 aa14.15□□□□□ -0.14
CAPN1-208ENST00000527323 ANKIB1Q9P2G1 1089 aa14.15□□□□□ -0.14
CAPN1-208ENST00000527323 SLC4A4Q9Y6R1 1079 aa14.15□□□□□ -0.14
CAPN1-208ENST00000527323 N4BP3O15049 544 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms