RNA–Protein interactions for RNA: ENST00000527237.1

TRIM3-205, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 339 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-205ENST00000527237 MCMDC2Q4G0Z9 681 aa21.63■■□□□ 1.05
TRIM3-205ENST00000527237 CATSPERGQ6ZRH7 1159 aa21.63■■□□□ 1.05
TRIM3-205ENST00000527237 SPICE1Q8N0Z3 855 aa21.63■■□□□ 1.05
TRIM3-205ENST00000527237 MKNK2Q9HBH9 465 aa21.63■■□□□ 1.05
TRIM3-205ENST00000527237 RBPJLQ9UBG7 517 aa21.63■■□□□ 1.05
TRIM3-205ENST00000527237 TMX2Q9Y320 296 aa21.63■■□□□ 1.05
TRIM3-205ENST00000527237 ZNF236Q9UL36 1845 aa21.62■■□□□ 1.05
TRIM3-205ENST00000527237 CNMDO75829 334 aa21.62■■□□□ 1.05
TRIM3-205ENST00000527237 TTC22Q5TAA0 569 aa21.62■■□□□ 1.05
TRIM3-205ENST00000527237 ZNF333Q96JL9 665 aa21.62■■□□□ 1.05
TRIM3-205ENST00000527237 INCENPQ9NQS7 918 aa21.62■■□□□ 1.05
TRIM3-205ENST00000527237 POTEFA5A3E0 1075 aa21.61■■□□□ 1.05
TRIM3-205ENST00000527237 SPDYE16A6NNV3 312 aaPredicted RBP21.61■■□□□ 1.05
TRIM3-205ENST00000527237 PRMT2P55345 433 aa21.61■■□□□ 1.05
TRIM3-205ENST00000527237 VCPKMTQ9H867 229 aa21.61■■□□□ 1.05
TRIM3-205ENST00000527237 PLIN4Q96Q06 1357 aa21.61■■□□□ 1.05
TRIM3-205ENST00000527237 IGKV6D-41A0A0C4DH26 115 aa21.6■■□□□ 1.05
TRIM3-205ENST00000527237 HOXD10P28358 340 aa21.6■■□□□ 1.05
TRIM3-205ENST00000527237 FLT3LGP49771 235 aa21.6■■□□□ 1.05
TRIM3-205ENST00000527237 RGS19P49795 217 aa21.6■■□□□ 1.05
TRIM3-205ENST00000527237 ERVK-9P63128 1117 aa21.6■■□□□ 1.05
TRIM3-205ENST00000527237 ERVK-24P63145 666 aa21.6■■□□□ 1.05
TRIM3-205ENST00000527237 Q3C1V9 767 aa21.6■■□□□ 1.05
TRIM3-205ENST00000527237 RAET1EQ8TD07 263 aa21.6■■□□□ 1.05
TRIM3-205ENST00000527237 TANGO6Q9C0B7 1094 aa21.6■■□□□ 1.05
TRIM3-205ENST00000527237 PORCNQ9H237 461 aa21.6■■□□□ 1.05
TRIM3-205ENST00000527237 IL25Q9H293 177 aa21.6■■□□□ 1.05
TRIM3-205ENST00000527237 KANSL2Q9H9L4 492 aa21.6■■□□□ 1.05
TRIM3-205ENST00000527237 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.6■■□□□ 1.05
TRIM3-205ENST00000527237 HSPD1P10809 573 aaKnown RBP21.59■■□□□ 1.05
TRIM3-205ENST00000527237 FAM47AQ5JRC9 791 aa21.59■■□□□ 1.05
TRIM3-205ENST00000527237 CWC27Q6UX04 472 aaKnown RBP21.59■■□□□ 1.05
TRIM3-205ENST00000527237 SKAP1Q86WV1 359 aa21.59■■□□□ 1.05
TRIM3-205ENST00000527237 DIAPH3Q9NSV4 1193 aa21.59■■□□□ 1.05
TRIM3-205ENST00000527237 BTBD7Q9P203 1132 aa21.59■■□□□ 1.05
TRIM3-205ENST00000527237 ELNP15502 786 aa21.58■■□□□ 1.05
TRIM3-205ENST00000527237 TICAM2Q86XR7 235 aa21.58■■□□□ 1.05
TRIM3-205ENST00000527237 GPRC5AQ8NFJ5 357 aa21.58■■□□□ 1.05
TRIM3-205ENST00000527237 CEP95Q96GE4 821 aa21.58■■□□□ 1.05
TRIM3-205ENST00000527237 SH2D4AQ9H788 454 aa21.58■■□□□ 1.05
TRIM3-205ENST00000527237 ZMYM6O95789 1325 aa21.57■■□□□ 1.04
TRIM3-205ENST00000527237 RAD21O60216 631 aa21.57■■□□□ 1.04
TRIM3-205ENST00000527237 FGAP02671 866 aa21.57■■□□□ 1.04
TRIM3-205ENST00000527237 GRK4P32298 578 aa21.57■■□□□ 1.04
TRIM3-205ENST00000527237 PDE4BQ07343 736 aa21.57■■□□□ 1.04
TRIM3-205ENST00000527237 MTFR1Q15390 333 aa21.57■■□□□ 1.04
TRIM3-205ENST00000527237 ALX1Q15699 326 aa21.57■■□□□ 1.04
TRIM3-205ENST00000527237 LBX2Q6XYB7 198 aa21.57■■□□□ 1.04
TRIM3-205ENST00000527237 ZNF444Q8N0Y2 327 aaPredicted RBP21.57■■□□□ 1.04
TRIM3-205ENST00000527237 LPAR1Q92633 364 aa21.57■■□□□ 1.04
TRIM3-205ENST00000527237 COA7Q96BR5 231 aa21.57■■□□□ 1.04
TRIM3-205ENST00000527237 NBPF3Q9H094 633 aa21.57■■□□□ 1.04
TRIM3-205ENST00000527237 MKI67P46013 3256 aaKnown RBP21.56■■□□□ 1.04
TRIM3-205ENST00000527237 WDR46O15213 610 aaKnown RBP21.56■■□□□ 1.04
TRIM3-205ENST00000527237 HAND2P61296 217 aa21.56■■□□□ 1.04
TRIM3-205ENST00000527237 SAMD1Q6SPF0 538 aaPredicted RBP21.56■■□□□ 1.04
TRIM3-205ENST00000527237 LRRC47Q8N1G4 583 aaKnown RBP21.56■■□□□ 1.04
TRIM3-205ENST00000527237 GTF3C2Q8WUA4 911 aaPredicted RBP21.56■■□□□ 1.04
TRIM3-205ENST00000527237 NUP88Q99567 741 aaPredicted RBP21.56■■□□□ 1.04
TRIM3-205ENST00000527237 FBXO28Q9NVF7 368 aa21.56■■□□□ 1.04
TRIM3-205ENST00000527237 ANAPC4Q9UJX5 808 aa21.56■■□□□ 1.04
TRIM3-205ENST00000527237 RABGAP1Q9Y3P9 1069 aa21.56■■□□□ 1.04
TRIM3-205ENST00000527237 SMCHD1A6NHR9 2005 aa21.56■■□□□ 1.04
TRIM3-205ENST00000527237 ADCY3O60266 1144 aa21.55■■□□□ 1.04
TRIM3-205ENST00000527237 FLOT1O75955 427 aa21.55■■□□□ 1.04
TRIM3-205ENST00000527237 SLC3A2P08195 630 aaKnown RBP21.55■■□□□ 1.04
TRIM3-205ENST00000527237 TSPY3P0CV98 308 aa21.55■■□□□ 1.04
TRIM3-205ENST00000527237 TSPY8P0CW00 308 aa21.55■■□□□ 1.04
TRIM3-205ENST00000527237 TFAP4Q01664 338 aa21.55■■□□□ 1.04
TRIM3-205ENST00000527237 FAM83BQ5T0W9 1011 aa21.55■■□□□ 1.04
TRIM3-205ENST00000527237 NBPF11Q86T75 865 aa21.55■■□□□ 1.04
TRIM3-205ENST00000527237 NEDD1Q8NHV4 660 aa21.55■■□□□ 1.04
TRIM3-205ENST00000527237 NKX2-3Q8TAU0 364 aa21.55■■□□□ 1.04
TRIM3-205ENST00000527237 ATG4CQ96DT6 458 aa21.55■■□□□ 1.04
TRIM3-205ENST00000527237 ZNF287Q9HBT7 754 aa21.55■■□□□ 1.04
TRIM3-205ENST00000527237 GOPCQ9HD26 462 aa21.55■■□□□ 1.04
TRIM3-205ENST00000527237 NYAP2Q9P242 653 aa21.55■■□□□ 1.04
TRIM3-205ENST00000527237 GJD2Q9UKL4 321 aa21.55■■□□□ 1.04
TRIM3-205ENST00000527237 NMT2O60551 498 aa21.54■■□□□ 1.04
TRIM3-205ENST00000527237 IRF5Q13568 498 aa21.54■■□□□ 1.04
TRIM3-205ENST00000527237 TBC1D10CQ8IV04 446 aa21.54■■□□□ 1.04
TRIM3-205ENST00000527237 MTMR4Q9NYA4 1195 aa21.54■■□□□ 1.04
TRIM3-205ENST00000527237 CLIP2Q9UDT6 1046 aa21.54■■□□□ 1.04
TRIM3-205ENST00000527237 ALPK3Q96L96 1907 aa21.53■■□□□ 1.04
TRIM3-205ENST00000527237 NDUFB10O96000 172 aa21.53■■□□□ 1.04
TRIM3-205ENST00000527237 DSG3P32926 999 aa21.53■■□□□ 1.04
TRIM3-205ENST00000527237 MLLT1Q03111 559 aaPredicted RBP21.53■■□□□ 1.04
TRIM3-205ENST00000527237 COG2Q14746 738 aa21.53■■□□□ 1.04
TRIM3-205ENST00000527237 GPR142Q7Z601 462 aa21.53■■□□□ 1.04
TRIM3-205ENST00000527237 SLAIN1Q8ND83 568 aa21.53■■□□□ 1.04
TRIM3-205ENST00000527237 MYH6P13533 1939 aa21.53■■□□□ 1.04
TRIM3-205ENST00000527237 HIP1O00291 1037 aa21.52■■□□□ 1.04
TRIM3-205ENST00000527237 EN2P19622 333 aaPredicted RBP21.52■■□□□ 1.04
TRIM3-205ENST00000527237 RASGRP2Q7LDG7 609 aa21.52■■□□□ 1.04
TRIM3-205ENST00000527237 IL17RBQ9NRM6 502 aa21.52■■□□□ 1.04
TRIM3-205ENST00000527237 MCM3APO60318 1980 aa21.52■■□□□ 1.04
TRIM3-205ENST00000527237 TSPY2A6NKD2 308 aa21.51■■□□□ 1.03
TRIM3-205ENST00000527237 F5H6K3 240 aa21.51■■□□□ 1.03
TRIM3-205ENST00000527237 ORC4O43929 436 aa21.51■■□□□ 1.03
TRIM3-205ENST00000527237 TTLL1O95922 423 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms