RNA–Protein interactions for RNA: ENST00000527142.5

SYVN1-208, Transcript of synoviolin 1, humanhuman

TSL 5

Gene SYVN1, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-208ENST00000527142 NYAP2Q9P242 653 aa12.8□□□□□ -0.36
SYVN1-208ENST00000527142 MYPNQ86TC9 1320 aa12.8□□□□□ -0.36
SYVN1-208ENST00000527142 IGKV6D-41A0A0C4DH26 115 aa12.79□□□□□ -0.36
SYVN1-208ENST00000527142 WDR46O15213 610 aaKnown RBP12.79□□□□□ -0.36
SYVN1-208ENST00000527142 HSPD1P10809 573 aaKnown RBP12.79□□□□□ -0.36
SYVN1-208ENST00000527142 GSPT1P15170 499 aaKnown RBP12.79□□□□□ -0.36
SYVN1-208ENST00000527142 NBPF11Q86T75 865 aa12.79□□□□□ -0.36
SYVN1-208ENST00000527142 ZNF444Q8N0Y2 327 aaPredicted RBP12.79□□□□□ -0.36
SYVN1-208ENST00000527142 RAET1EQ8TD07 263 aa12.79□□□□□ -0.36
SYVN1-208ENST00000527142 COA7Q96BR5 231 aa12.79□□□□□ -0.36
SYVN1-208ENST00000527142 ZNF333Q96JL9 665 aa12.79□□□□□ -0.36
SYVN1-208ENST00000527142 TANGO6Q9C0B7 1094 aa12.79□□□□□ -0.36
SYVN1-208ENST00000527142 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.79□□□□□ -0.36
SYVN1-208ENST00000527142 RABGAP1Q9Y3P9 1069 aa12.79□□□□□ -0.36
SYVN1-208ENST00000527142 RAD50Q92878 1312 aa12.79□□□□□ -0.36
SYVN1-208ENST00000527142 ZSWIM8A7E2V4 1837 aa12.78□□□□□ -0.36
SYVN1-208ENST00000527142 SPDYE16A6NNV3 312 aaPredicted RBP12.78□□□□□ -0.36
SYVN1-208ENST00000527142 ORC4O43929 436 aa12.78□□□□□ -0.36
SYVN1-208ENST00000527142 PRDM1O75626 825 aa12.78□□□□□ -0.36
SYVN1-208ENST00000527142 FGAP02671 866 aa12.78□□□□□ -0.36
SYVN1-208ENST00000527142 PCP11498 1178 aaKnown RBP12.78□□□□□ -0.36
SYVN1-208ENST00000527142 MAPK4P31152 587 aa12.78□□□□□ -0.36
SYVN1-208ENST00000527142 ERVK-9P63128 1117 aa12.78□□□□□ -0.36
SYVN1-208ENST00000527142 ERVK-24P63145 666 aa12.78□□□□□ -0.36
SYVN1-208ENST00000527142 CCNA1P78396 465 aa12.78□□□□□ -0.36
SYVN1-208ENST00000527142 ATP2B2Q01814 1243 aa12.78□□□□□ -0.36
SYVN1-208ENST00000527142 PRKCZQ05513 592 aa12.78□□□□□ -0.36
SYVN1-208ENST00000527142 IRF5Q13568 498 aa12.78□□□□□ -0.36
SYVN1-208ENST00000527142 MB21D1Q8N884 522 aa12.78□□□□□ -0.36
SYVN1-208ENST00000527142 SLAIN1Q8ND83 568 aa12.78□□□□□ -0.36
SYVN1-208ENST00000527142 NEDD1Q8NHV4 660 aa12.78□□□□□ -0.36
SYVN1-208ENST00000527142 TXNRD2Q9NNW7 524 aa12.78□□□□□ -0.36
SYVN1-208ENST00000527142 RBPJLQ9UBG7 517 aa12.78□□□□□ -0.36
SYVN1-208ENST00000527142 TTLL1O95922 423 aa12.77□□□□□ -0.37
SYVN1-208ENST00000527142 FGRP09769 529 aa12.77□□□□□ -0.37
SYVN1-208ENST00000527142 TSPY3P0CV98 308 aa12.77□□□□□ -0.37
SYVN1-208ENST00000527142 TSPY8P0CW00 308 aa12.77□□□□□ -0.37
SYVN1-208ENST00000527142 NT5C2P49902 561 aa12.77□□□□□ -0.37
SYVN1-208ENST00000527142 COG2Q14746 738 aa12.77□□□□□ -0.37
SYVN1-208ENST00000527142 CWC27Q6UX04 472 aaKnown RBP12.77□□□□□ -0.37
SYVN1-208ENST00000527142 STK11IPQ8N1F8 1099 aa12.77□□□□□ -0.37
SYVN1-208ENST00000527142 SOCS4Q8WXH5 440 aa12.77□□□□□ -0.37
SYVN1-208ENST00000527142 MTMR4Q9NYA4 1195 aa12.77□□□□□ -0.37
SYVN1-208ENST00000527142 HOXC10Q9NYD6 342 aa12.77□□□□□ -0.37
SYVN1-208ENST00000527142 KIAA0100Q14667 2235 aaKnown RBP12.76□□□□□ -0.37
SYVN1-208ENST00000527142 BRCA2P51587 3418 aa12.76□□□□□ -0.37
SYVN1-208ENST00000527142 GRK4P32298 578 aa12.76□□□□□ -0.37
SYVN1-208ENST00000527142 FLT3LGP49771 235 aa12.76□□□□□ -0.37
SYVN1-208ENST00000527142 SOX10P56693 466 aa12.76□□□□□ -0.37
SYVN1-208ENST00000527142 CTDSPL2Q05D32 466 aa12.76□□□□□ -0.37
SYVN1-208ENST00000527142 KIAA1755Q5JYT7 1200 aa12.76□□□□□ -0.37
SYVN1-208ENST00000527142 POTEEQ6S8J3 1075 aa12.76□□□□□ -0.37
SYVN1-208ENST00000527142 SPICE1Q8N0Z3 855 aa12.76□□□□□ -0.37
SYVN1-208ENST00000527142 GMCL1P1Q8NEA9 526 aa12.76□□□□□ -0.37
SYVN1-208ENST00000527142 PXYLP1Q8TE99 480 aa12.76□□□□□ -0.37
SYVN1-208ENST00000527142 MKL1Q969V6 931 aa12.76□□□□□ -0.37
SYVN1-208ENST00000527142 CEP95Q96GE4 821 aa12.76□□□□□ -0.37
SYVN1-208ENST00000527142 PAGR1Q9BTK6 254 aa12.76□□□□□ -0.37
SYVN1-208ENST00000527142 DSCC1Q9BVC3 393 aa12.76□□□□□ -0.37
SYVN1-208ENST00000527142 A0A0G2JMZ2 1700 aa12.76□□□□□ -0.37
SYVN1-208ENST00000527142 TSPY2A6NKD2 308 aa12.75□□□□□ -0.37
SYVN1-208ENST00000527142 MGAMO43451 1857 aa12.75□□□□□ -0.37
SYVN1-208ENST00000527142 CNMDO75829 334 aa12.75□□□□□ -0.37
SYVN1-208ENST00000527142 FLOT1O75955 427 aa12.75□□□□□ -0.37
SYVN1-208ENST00000527142 ECM2O94769 699 aaPredicted RBP12.75□□□□□ -0.37
SYVN1-208ENST00000527142 NEFLP07196 543 aa12.75□□□□□ -0.37
SYVN1-208ENST00000527142 TFAP4Q01664 338 aa12.75□□□□□ -0.37
SYVN1-208ENST00000527142 CCAR1Q8IX12 1150 aaKnown RBP12.75□□□□□ -0.37
SYVN1-208ENST00000527142 RUFY2Q8WXA3 655 aa12.75□□□□□ -0.37
SYVN1-208ENST00000527142 RNF41Q9H4P4 317 aaPredicted RBP12.75□□□□□ -0.37
SYVN1-208ENST00000527142 RBBP6Q7Z6E9 1792 aaKnown RBP12.74□□□□□ -0.37
SYVN1-208ENST00000527142 F5H6K3 240 aa12.74□□□□□ -0.37
SYVN1-208ENST00000527142 ADCY3O60266 1144 aa12.74□□□□□ -0.37
SYVN1-208ENST00000527142 RANBP6O60518 1105 aaKnown RBP12.74□□□□□ -0.37
SYVN1-208ENST00000527142 NDUFB10O96000 172 aa12.74□□□□□ -0.37
SYVN1-208ENST00000527142 DSG3P32926 999 aa12.74□□□□□ -0.37
SYVN1-208ENST00000527142 KLRC3Q07444 240 aa12.74□□□□□ -0.37
SYVN1-208ENST00000527142 FAM47AQ5JRC9 791 aa12.74□□□□□ -0.37
SYVN1-208ENST00000527142 SH3TC2Q8TF17 1288 aa12.74□□□□□ -0.37
SYVN1-208ENST00000527142 STAG1Q8WVM7 1258 aa12.74□□□□□ -0.37
SYVN1-208ENST00000527142 PORCNQ9H237 461 aa12.74□□□□□ -0.37
SYVN1-208ENST00000527142 CLIP2Q9UDT6 1046 aa12.74□□□□□ -0.37
SYVN1-208ENST00000527142 CTNNA3Q9UI47 895 aa12.74□□□□□ -0.37
SYVN1-208ENST00000527142 GJD2Q9UKL4 321 aa12.74□□□□□ -0.37
SYVN1-208ENST00000527142 PPP1R9AQ9ULJ8 1098 aa12.74□□□□□ -0.37
SYVN1-208ENST00000527142 GABRQQ9UN88 632 aa12.74□□□□□ -0.37
SYVN1-208ENST00000527142 PEX10O60683 326 aa12.73□□□□□ -0.37
SYVN1-208ENST00000527142 XRCC5P13010 732 aaKnown RBP12.73□□□□□ -0.37
SYVN1-208ENST00000527142 CHMLP26374 656 aa12.73□□□□□ -0.37
SYVN1-208ENST00000527142 NOVP48745 357 aa12.73□□□□□ -0.37
SYVN1-208ENST00000527142 UBXN2AP68543 259 aa12.73□□□□□ -0.37
SYVN1-208ENST00000527142 FAM83BQ5T0W9 1011 aa12.73□□□□□ -0.37
SYVN1-208ENST00000527142 AKNAD1Q5T1N1 836 aa12.73□□□□□ -0.37
SYVN1-208ENST00000527142 PRPF38BQ5VTL8 546 aaKnown RBP12.73□□□□□ -0.37
SYVN1-208ENST00000527142 MFSD6Q6ZSS7 791 aa12.73□□□□□ -0.37
SYVN1-208ENST00000527142 GPR142Q7Z601 462 aa12.73□□□□□ -0.37
SYVN1-208ENST00000527142 PLEKHH3Q7Z736 793 aa12.73□□□□□ -0.37
SYVN1-208ENST00000527142 TBC1D10CQ8IV04 446 aa12.73□□□□□ -0.37
SYVN1-208ENST00000527142 TRMT44Q8IYL2 757 aaKnown RBP12.73□□□□□ -0.37
SYVN1-208ENST00000527142 SHCBP1Q8NEM2 672 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms