RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 CLIP2Q9UDT6 1046 aa19.24■□□□□ 0.67
SSSCA1-202ENST00000526433 RAD50Q92878 1312 aa19.24■□□□□ 0.67
SSSCA1-202ENST00000526433 ZNF213O14771 459 aa19.23■□□□□ 0.67
SSSCA1-202ENST00000526433 RANBP6O60518 1105 aaKnown RBP19.23■□□□□ 0.67
SSSCA1-202ENST00000526433 FMNL1O95466 1100 aaPredicted RBP19.23■□□□□ 0.67
SSSCA1-202ENST00000526433 BMP2KLQ5H9B9 411 aa19.23■□□□□ 0.67
SSSCA1-202ENST00000526433 FBXO46Q6PJ61 603 aaPredicted RBP19.23■□□□□ 0.67
SSSCA1-202ENST00000526433 SPICE1Q8N0Z3 855 aa19.23■□□□□ 0.67
SSSCA1-202ENST00000526433 LPAR1Q92633 364 aa19.23■□□□□ 0.67
SSSCA1-202ENST00000526433 MKL1Q969V6 931 aa19.23■□□□□ 0.67
SSSCA1-202ENST00000526433 CEP95Q96GE4 821 aa19.23■□□□□ 0.67
SSSCA1-202ENST00000526433 TOMM22Q9NS69 142 aa19.23■□□□□ 0.67
SSSCA1-202ENST00000526433 CTNNA3Q9UI47 895 aa19.23■□□□□ 0.67
SSSCA1-202ENST00000526433 TSPY2A6NKD2 308 aa19.22■□□□□ 0.67
SSSCA1-202ENST00000526433 SGSM2O43147 1006 aa19.22■□□□□ 0.67
SSSCA1-202ENST00000526433 FAM110CQ1W6H9 321 aa19.22■□□□□ 0.67
SSSCA1-202ENST00000526433 RRP12Q5JTH9 1297 aaKnown RBP19.22■□□□□ 0.67
SSSCA1-202ENST00000526433 AKNAD1Q5T1N1 836 aa19.22■□□□□ 0.67
SSSCA1-202ENST00000526433 MFSD6Q6ZSS7 791 aa19.22■□□□□ 0.67
SSSCA1-202ENST00000526433 TRIM47Q96LD4 638 aa19.22■□□□□ 0.67
SSSCA1-202ENST00000526433 NBPF3Q9H094 633 aa19.22■□□□□ 0.67
SSSCA1-202ENST00000526433 GOPCQ9HD26 462 aa19.22■□□□□ 0.67
SSSCA1-202ENST00000526433 RBPJLQ9UBG7 517 aa19.22■□□□□ 0.67
SSSCA1-202ENST00000526433 PTPN22Q9Y2R2 807 aa19.22■□□□□ 0.67
SSSCA1-202ENST00000526433 ZSWIM8A7E2V4 1837 aa19.21■□□□□ 0.67
SSSCA1-202ENST00000526433 RAD21O60216 631 aa19.21■□□□□ 0.67
SSSCA1-202ENST00000526433 TTLL1O95922 423 aa19.21■□□□□ 0.67
SSSCA1-202ENST00000526433 GNRH1P01148 92 aa19.21■□□□□ 0.67
SSSCA1-202ENST00000526433 PTH1RQ03431 593 aa19.21■□□□□ 0.67
SSSCA1-202ENST00000526433 POTEEQ6S8J3 1075 aa19.21■□□□□ 0.67
SSSCA1-202ENST00000526433 TANGO6Q9C0B7 1094 aa19.21■□□□□ 0.67
SSSCA1-202ENST00000526433 MORF4L1Q9UBU8 362 aa19.21■□□□□ 0.67
SSSCA1-202ENST00000526433 MYH4Q9Y623 1939 aa19.21■□□□□ 0.67
SSSCA1-202ENST00000526433 PLIN4Q96Q06 1357 aa19.2■□□□□ 0.66
SSSCA1-202ENST00000526433 DOCK3Q8IZD9 2030 aa19.2■□□□□ 0.66
SSSCA1-202ENST00000526433 MGAMO43451 1857 aa19.2■□□□□ 0.66
SSSCA1-202ENST00000526433 F5H6K3 240 aa19.2■□□□□ 0.66
SSSCA1-202ENST00000526433 WDR46O15213 610 aaKnown RBP19.2■□□□□ 0.66
SSSCA1-202ENST00000526433 PEX10O60683 326 aa19.2■□□□□ 0.66
SSSCA1-202ENST00000526433 PCP11498 1178 aaKnown RBP19.2■□□□□ 0.66
SSSCA1-202ENST00000526433 HOXD10P28358 340 aa19.2■□□□□ 0.66
SSSCA1-202ENST00000526433 FCGRTP55899 365 aa19.2■□□□□ 0.66
SSSCA1-202ENST00000526433 KLRC3Q07444 240 aa19.2■□□□□ 0.66
SSSCA1-202ENST00000526433 COG2Q14746 738 aa19.2■□□□□ 0.66
SSSCA1-202ENST00000526433 IMMTQ16891 758 aaKnown RBP19.2■□□□□ 0.66
SSSCA1-202ENST00000526433 TBC1D10CQ8IV04 446 aa19.2■□□□□ 0.66
SSSCA1-202ENST00000526433 GPRC5AQ8NFJ5 357 aa19.2■□□□□ 0.66
SSSCA1-202ENST00000526433 GTF3C2Q8WUA4 911 aaPredicted RBP19.2■□□□□ 0.66
SSSCA1-202ENST00000526433 STAG1Q8WVM7 1258 aa19.2■□□□□ 0.66
SSSCA1-202ENST00000526433 RNF41Q9H4P4 317 aaPredicted RBP19.2■□□□□ 0.66
SSSCA1-202ENST00000526433 TXNRD2Q9NNW7 524 aa19.2■□□□□ 0.66
SSSCA1-202ENST00000526433 IL17RBQ9NRM6 502 aa19.2■□□□□ 0.66
SSSCA1-202ENST00000526433 HOXC10Q9NYD6 342 aa19.2■□□□□ 0.66
SSSCA1-202ENST00000526433 NMT2O60551 498 aa19.19■□□□□ 0.66
SSSCA1-202ENST00000526433 Q3C1V9 767 aa19.19■□□□□ 0.66
SSSCA1-202ENST00000526433 IFFO2Q5TF58 517 aa19.19■□□□□ 0.66
SSSCA1-202ENST00000526433 PAGR1Q9BTK6 254 aa19.19■□□□□ 0.66
SSSCA1-202ENST00000526433 HPS5Q9UPZ3 1129 aa19.19■□□□□ 0.66
SSSCA1-202ENST00000526433 PPP4R3BQ5MIZ7 849 aa19.18■□□□□ 0.66
SSSCA1-202ENST00000526433 LBX2Q6XYB7 198 aa19.18■□□□□ 0.66
SSSCA1-202ENST00000526433 SRRDQ9UH36 339 aa19.18■□□□□ 0.66
SSSCA1-202ENST00000526433 RABGAP1Q9Y3P9 1069 aa19.18■□□□□ 0.66
SSSCA1-202ENST00000526433 SPDYE16A6NNV3 312 aaPredicted RBP19.17■□□□□ 0.66
SSSCA1-202ENST00000526433 CAPN15O75808 1086 aa19.17■□□□□ 0.66
SSSCA1-202ENST00000526433 CNMDO75829 334 aa19.17■□□□□ 0.66
SSSCA1-202ENST00000526433 FLOT1O75955 427 aa19.17■□□□□ 0.66
SSSCA1-202ENST00000526433 NDUFB10O96000 172 aa19.17■□□□□ 0.66
SSSCA1-202ENST00000526433 DSG3P32926 999 aa19.17■□□□□ 0.66
SSSCA1-202ENST00000526433 PRMT2P55345 433 aa19.17■□□□□ 0.66
SSSCA1-202ENST00000526433 ERVK-9P63128 1117 aa19.17■□□□□ 0.66
SSSCA1-202ENST00000526433 ERVK-24P63145 666 aa19.17■□□□□ 0.66
SSSCA1-202ENST00000526433 FAM83BQ5T0W9 1011 aa19.17■□□□□ 0.66
SSSCA1-202ENST00000526433 LRRC47Q8N1G4 583 aaKnown RBP19.17■□□□□ 0.66
SSSCA1-202ENST00000526433 NKX2-3Q8TAU0 364 aa19.17■□□□□ 0.66
SSSCA1-202ENST00000526433 ESYT1Q9BSJ8 1104 aa19.17■□□□□ 0.66
SSSCA1-202ENST00000526433 TCP11L1Q9NUJ3 509 aa19.17■□□□□ 0.66
SSSCA1-202ENST00000526433 SYNPO2Q9UMS6 1093 aa19.17■□□□□ 0.66
SSSCA1-202ENST00000526433 STX8Q9UNK0 236 aa19.17■□□□□ 0.66
SSSCA1-202ENST00000526433 PTCH2Q9Y6C5 1203 aa19.17■□□□□ 0.66
SSSCA1-202ENST00000526433 U3KPZ7 1027 aaPredicted RBP19.17■□□□□ 0.66
SSSCA1-202ENST00000526433 RLFQ13129 1914 aa19.16■□□□□ 0.66
SSSCA1-202ENST00000526433 CCDC85CA6NKD9 419 aa19.16■□□□□ 0.66
SSSCA1-202ENST00000526433 TNPO2O14787 897 aaKnown RBP19.16■□□□□ 0.66
SSSCA1-202ENST00000526433 KIAA1211Q6ZU35 1233 aa19.16■□□□□ 0.66
SSSCA1-202ENST00000526433 ESR2Q92731 530 aa19.16■□□□□ 0.66
SSSCA1-202ENST00000526433 MAP4K1Q92918 833 aa19.16■□□□□ 0.66
SSSCA1-202ENST00000526433 NUP88Q99567 741 aaPredicted RBP19.16■□□□□ 0.66
SSSCA1-202ENST00000526433 BTBD7Q9P203 1132 aa19.16■□□□□ 0.66
SSSCA1-202ENST00000526433 NEDD4P46934 1319 aa19.16■□□□□ 0.66
SSSCA1-202ENST00000526433 NOVP48745 357 aa19.15■□□□□ 0.66
SSSCA1-202ENST00000526433 SLFN13Q68D06 897 aa19.15■□□□□ 0.66
SSSCA1-202ENST00000526433 SAMD1Q6SPF0 538 aaPredicted RBP19.15■□□□□ 0.66
SSSCA1-202ENST00000526433 GMCL1P1Q8NEA9 526 aa19.15■□□□□ 0.66
SSSCA1-202ENST00000526433 COA7Q96BR5 231 aa19.15■□□□□ 0.66
SSSCA1-202ENST00000526433 FBXO28Q9NVF7 368 aa19.15■□□□□ 0.66
SSSCA1-202ENST00000526433 GABRQQ9UN88 632 aa19.15■□□□□ 0.66
SSSCA1-202ENST00000526433 LAMA4Q16363 1823 aa19.15■□□□□ 0.66
SSSCA1-202ENST00000526433 MYPNQ86TC9 1320 aa19.15■□□□□ 0.66
SSSCA1-202ENST00000526433 B4E1Z4 1266 aa19.14■□□□□ 0.65
SSSCA1-202ENST00000526433 CCAR1Q8IX12 1150 aaKnown RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms