RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 AAK1Q2M2I8 961 aa13.27□□□□□ -0.29
NEDD8-204ENST00000526430 TMEM31Q5JXX7 168 aa13.27□□□□□ -0.29
NEDD8-204ENST00000526430 AACSQ86V21 672 aa13.27□□□□□ -0.29
NEDD8-204ENST00000526430 NECAB3Q96P71 396 aaPredicted RBP13.27□□□□□ -0.29
NEDD8-204ENST00000526430 TSPYL2Q9H2G4 693 aaPredicted RBP13.27□□□□□ -0.29
NEDD8-204ENST00000526430 PRDM12Q9H4Q4 367 aa13.27□□□□□ -0.29
NEDD8-204ENST00000526430 GNL3LQ9NVN8 582 aaKnown RBP13.27□□□□□ -0.29
NEDD8-204ENST00000526430 HERC5Q9UII4 1024 aaKnown RBP13.27□□□□□ -0.29
NEDD8-204ENST00000526430 DENND2AQ9ULE3 1009 aa13.27□□□□□ -0.29
NEDD8-204ENST00000526430 RABGAP1Q9Y3P9 1069 aa13.27□□□□□ -0.29
NEDD8-204ENST00000526430 PRRC2BQ5JSZ5 2229 aaKnown RBP13.27□□□□□ -0.29
NEDD8-204ENST00000526430 MAP4K4O95819 1239 aaPredicted RBP13.26□□□□□ -0.29
NEDD8-204ENST00000526430 ASNSP08243 561 aa13.26□□□□□ -0.29
NEDD8-204ENST00000526430 BTDP43251 543 aa13.26□□□□□ -0.29
NEDD8-204ENST00000526430 NUCB1Q02818 461 aa13.26□□□□□ -0.29
NEDD8-204ENST00000526430 ADGRE1Q14246 886 aa13.26□□□□□ -0.29
NEDD8-204ENST00000526430 GRB14Q14449 540 aa13.26□□□□□ -0.29
NEDD8-204ENST00000526430 RRP1BQ14684 758 aaKnown RBP13.26□□□□□ -0.29
NEDD8-204ENST00000526430 ANKRD45Q5TZF3 282 aa13.26□□□□□ -0.29
NEDD8-204ENST00000526430 ERICH6BQ5W0A0 696 aa13.26□□□□□ -0.29
NEDD8-204ENST00000526430 PI16Q6UXB8 463 aa13.26□□□□□ -0.29
NEDD8-204ENST00000526430 ZNF512BQ96KM6 892 aaPredicted RBP13.26□□□□□ -0.29
NEDD8-204ENST00000526430 PAGR1Q9BTK6 254 aa13.26□□□□□ -0.29
NEDD8-204ENST00000526430 CWC22Q9HCG8 908 aaKnown RBP13.26□□□□□ -0.29
NEDD8-204ENST00000526430 A0A0G2JMZ2 1700 aa13.25□□□□□ -0.29
NEDD8-204ENST00000526430 MROH7-TTC4A0A0A0MT08 1334 aa13.25□□□□□ -0.29
NEDD8-204ENST00000526430 PDS5AQ29RF7 1337 aaKnown RBP13.25□□□□□ -0.29
NEDD8-204ENST00000526430 USP17L10C9JJH3 530 aa13.25□□□□□ -0.29
NEDD8-204ENST00000526430 SEPT4O43236 478 aa13.25□□□□□ -0.29
NEDD8-204ENST00000526430 GPR37L1O60883 481 aa13.25□□□□□ -0.29
NEDD8-204ENST00000526430 RAG1P15918 1043 aa13.25□□□□□ -0.29
NEDD8-204ENST00000526430 PTPREP23469 700 aa13.25□□□□□ -0.29
NEDD8-204ENST00000526430 PDE4AP27815 886 aa13.25□□□□□ -0.29
NEDD8-204ENST00000526430 CYP2C19P33261 490 aa13.25□□□□□ -0.29
NEDD8-204ENST00000526430 ADCYAP1R1P41586 468 aa13.25□□□□□ -0.29
NEDD8-204ENST00000526430 MCAMP43121 646 aa13.25□□□□□ -0.29
NEDD8-204ENST00000526430 RHBDL3P58872 404 aa13.25□□□□□ -0.29
NEDD8-204ENST00000526430 RASGRF1Q13972 1273 aa13.25□□□□□ -0.29
NEDD8-204ENST00000526430 OLFML2BQ68BL8 750 aa13.25□□□□□ -0.29
NEDD8-204ENST00000526430 B4GALNT3Q6L9W6 998 aa13.25□□□□□ -0.29
NEDD8-204ENST00000526430 ALYREFQ86V81 257 aaKnown RBP13.25□□□□□ -0.29
NEDD8-204ENST00000526430 DZIP1Q86YF9 867 aaKnown RBP13.25□□□□□ -0.29
NEDD8-204ENST00000526430 CLASRPQ8N2M8 674 aaKnown RBP13.25□□□□□ -0.29
NEDD8-204ENST00000526430 PBX4Q9BYU1 374 aa13.25□□□□□ -0.29
NEDD8-204ENST00000526430 EPHX3Q9H6B9 360 aa13.25□□□□□ -0.29
NEDD8-204ENST00000526430 GINM1Q9NU53 330 aa13.25□□□□□ -0.29
NEDD8-204ENST00000526430 HMG20BQ9P0W2 317 aa13.25□□□□□ -0.29
NEDD8-204ENST00000526430 BRWD1Q9NSI6 2320 aa13.24□□□□□ -0.29
NEDD8-204ENST00000526430 MYH1P12882 1939 aa13.24□□□□□ -0.29
NEDD8-204ENST00000526430 GPR75-ASB3A0A0A6YYF3 556 aa13.24□□□□□ -0.29
NEDD8-204ENST00000526430 LRRC41Q15345 812 aa13.24□□□□□ -0.29
NEDD8-204ENST00000526430 CCDC85BQ15834 202 aaPredicted RBP13.24□□□□□ -0.29
NEDD8-204ENST00000526430 RASIP1Q5U651 963 aa13.24□□□□□ -0.29
NEDD8-204ENST00000526430 NPLOC4Q8TAT6 608 aa13.24□□□□□ -0.29
NEDD8-204ENST00000526430 PHF24Q9UPV7 400 aa13.24□□□□□ -0.29
NEDD8-204ENST00000526430 IVNS1ABPQ9Y6Y0 642 aa13.24□□□□□ -0.29
NEDD8-204ENST00000526430 PARP14Q460N5 1801 aa13.23□□□□□ -0.29
NEDD8-204ENST00000526430 CNMDO75829 334 aa13.23□□□□□ -0.29
NEDD8-204ENST00000526430 LBX2Q6XYB7 198 aa13.23□□□□□ -0.29
NEDD8-204ENST00000526430 CHD1LQ86WJ1 897 aa13.23□□□□□ -0.29
NEDD8-204ENST00000526430 ZNF384Q8TF68 577 aa13.23□□□□□ -0.29
NEDD8-204ENST00000526430 LNPKQ9C0E8 428 aa13.23□□□□□ -0.29
NEDD8-204ENST00000526430 NDUFB9Q9Y6M9 179 aa13.23□□□□□ -0.29
NEDD8-204ENST00000526430 MYO5AQ9Y4I1 1855 aaKnown RBP13.23□□□□□ -0.29
NEDD8-204ENST00000526430 NEFLP07196 543 aa13.22□□□□□ -0.29
NEDD8-204ENST00000526430 ATP5JP18859 108 aa13.22□□□□□ -0.29
NEDD8-204ENST00000526430 PBX2P40425 430 aa13.22□□□□□ -0.29
NEDD8-204ENST00000526430 TSHZ3Q63HK5 1081 aa13.22□□□□□ -0.29
NEDD8-204ENST00000526430 CCDC174Q6PII3 467 aa13.22□□□□□ -0.29
NEDD8-204ENST00000526430 SKAP1Q86WV1 359 aa13.22□□□□□ -0.29
NEDD8-204ENST00000526430 PI4K2BQ8TCG2 481 aa13.22□□□□□ -0.29
NEDD8-204ENST00000526430 FERMT2Q96AC1 680 aa13.22□□□□□ -0.29
NEDD8-204ENST00000526430 TOX2Q96NM4 488 aa13.22□□□□□ -0.29
NEDD8-204ENST00000526430 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.22□□□□□ -0.295e-9■□□□□ 8.6
NEDD8-204ENST00000526430 ANTXR1Q9H6X2 564 aa13.22□□□□□ -0.29
NEDD8-204ENST00000526430 C11orf16Q9NQ32 467 aa13.22□□□□□ -0.29
NEDD8-204ENST00000526430 SNRKQ9NRH2 765 aa13.22□□□□□ -0.29
NEDD8-204ENST00000526430 PPP4R2Q9NY27 417 aa13.22□□□□□ -0.29
NEDD8-204ENST00000526430 ERC2O15083 957 aa13.21□□□□□ -0.29
NEDD8-204ENST00000526430 CYP2E1P05181 493 aaPredicted RBP13.21□□□□□ -0.29
NEDD8-204ENST00000526430 IFIT2P09913 472 aaKnown RBP13.21□□□□□ -0.29
NEDD8-204ENST00000526430 IGFBP4P22692 258 aa13.21□□□□□ -0.29
NEDD8-204ENST00000526430 RAB30Q15771 203 aa13.21□□□□□ -0.29
NEDD8-204ENST00000526430 CCDC158Q5M9N0 1113 aa13.21□□□□□ -0.29
NEDD8-204ENST00000526430 SPTY2D1Q68D10 685 aaPredicted RBP13.21□□□□□ -0.29
NEDD8-204ENST00000526430 CCDC129Q6ZRS4 1044 aa13.21□□□□□ -0.29
NEDD8-204ENST00000526430 TBC1D9Q6ZT07 1266 aa13.21□□□□□ -0.29
NEDD8-204ENST00000526430 ANKRD33Q7Z3H0 272 aa13.21□□□□□ -0.29
NEDD8-204ENST00000526430 PLEKHM2Q8IWE5 1019 aa13.21□□□□□ -0.29
NEDD8-204ENST00000526430 SPATA5Q8NB90 893 aa13.21□□□□□ -0.29
NEDD8-204ENST00000526430 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.21□□□□□ -0.29
NEDD8-204ENST00000526430 C12orf42Q96LP6 360 aa13.21□□□□□ -0.29
NEDD8-204ENST00000526430 BCL11AQ9H165 835 aa13.21□□□□□ -0.29
NEDD8-204ENST00000526430 EMILIN3Q9NT22 766 aa13.21□□□□□ -0.29
NEDD8-204ENST00000526430 TMEM39AQ9NV64 488 aa13.21□□□□□ -0.29
NEDD8-204ENST00000526430 PI4KBQ9UBF8 816 aa13.21□□□□□ -0.29
NEDD8-204ENST00000526430 CACNA1AO00555 2505 aa13.21□□□□□ -0.29
NEDD8-204ENST00000526430 ROBO3Q96MS0 1386 aa13.2□□□□□ -0.3
NEDD8-204ENST00000526430 UQCRFS1P1P0C7P4 283 aa13.2□□□□□ -0.3
NEDD8-204ENST00000526430 ZAP70P43403 619 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms