RNA–Protein interactions for RNA: ENST00000526335.1

C11orf54-203, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 2

Gene C11orf54, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-203ENST00000526335 TIGD5Q53EQ6 642 aa7.76□□□□□ -1.17
C11orf54-203ENST00000526335 WIPI1Q5MNZ9 446 aaPredicted RBP7.76□□□□□ -1.17
C11orf54-203ENST00000526335 LETMD1Q6P1Q0 360 aa7.76□□□□□ -1.17
C11orf54-203ENST00000526335 HID1Q8IV36 788 aa7.76□□□□□ -1.17
C11orf54-203ENST00000526335 ZSCAN29Q8IWY8 852 aaPredicted RBP7.76□□□□□ -1.17
C11orf54-203ENST00000526335 PDZD8Q8NEN9 1154 aa7.76□□□□□ -1.17
C11orf54-203ENST00000526335 SPG7Q9UQ90 795 aa7.76□□□□□ -1.17
C11orf54-203ENST00000526335 SNCAIPQ9Y6H5 919 aa7.76□□□□□ -1.17
C11orf54-203ENST00000526335 USP17L7P0C7H9 530 aa7.75□□□□□ -1.17
C11orf54-203ENST00000526335 TMCO4Q5TGY1 634 aa7.75□□□□□ -1.17
C11orf54-203ENST00000526335 FRMD5Q7Z6J6 570 aa7.75□□□□□ -1.17
C11orf54-203ENST00000526335 CREG2Q8IUH2 290 aa7.75□□□□□ -1.17
C11orf54-203ENST00000526335 C12orf49Q9H741 205 aa7.75□□□□□ -1.17
C11orf54-203ENST00000526335 FAM8A1Q9UBU6 413 aa7.75□□□□□ -1.17
C11orf54-203ENST00000526335 TNFRSF1AP19438 455 aa7.74□□□□□ -1.17
C11orf54-203ENST00000526335 CYP7A1P22680 504 aa7.74□□□□□ -1.17
C11orf54-203ENST00000526335 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.74□□□□□ -1.17
C11orf54-203ENST00000526335 OXR1Q8N573 874 aa7.74□□□□□ -1.17
C11orf54-203ENST00000526335 RIN3Q8TB24 985 aa7.74□□□□□ -1.17
C11orf54-203ENST00000526335 GAL3ST3Q96A11 431 aa7.74□□□□□ -1.17
C11orf54-203ENST00000526335 COX4I2Q96KJ9 171 aa7.74□□□□□ -1.17
C11orf54-203ENST00000526335 PCGF6Q9BYE7 350 aa7.74□□□□□ -1.17
C11orf54-203ENST00000526335 WWC3Q9ULE0 1092 aa7.74□□□□□ -1.17
C11orf54-203ENST00000526335 TTF2Q9UNY4 1162 aaKnown RBP7.74□□□□□ -1.17
C11orf54-203ENST00000526335 CST3P01034 146 aaPredicted RBP7.73□□□□□ -1.17
C11orf54-203ENST00000526335 PRAMEF13Q5VWM6 474 aa7.73□□□□□ -1.17
C11orf54-203ENST00000526335 SV2BQ7L1I2 683 aa7.73□□□□□ -1.17
C11orf54-203ENST00000526335 XAGE3Q8WTP9 111 aa7.73□□□□□ -1.17
C11orf54-203ENST00000526335 DCAF1Q9Y4B6 1507 aa7.73□□□□□ -1.17
C11orf54-203ENST00000526335 KIR3DL1P43629 444 aa7.72□□□□□ -1.17
C11orf54-203ENST00000526335 RTP5Q14D33 572 aa7.72□□□□□ -1.17
C11orf54-203ENST00000526335 SORCS2Q96PQ0 1159 aa7.72□□□□□ -1.17
C11orf54-203ENST00000526335 LUC7LQ9NQ29 371 aaKnown RBP7.72□□□□□ -1.17
C11orf54-203ENST00000526335 BRD1O95696 1058 aa7.71□□□□□ -1.17
C11orf54-203ENST00000526335 LMNB1P20700 586 aa7.71□□□□□ -1.17
C11orf54-203ENST00000526335 GRK4P32298 578 aa7.71□□□□□ -1.17
C11orf54-203ENST00000526335 CDK8P49336 464 aa7.71□□□□□ -1.17
C11orf54-203ENST00000526335 TTBK2Q6IQ55 1244 aa7.71□□□□□ -1.17
C11orf54-203ENST00000526335 FITM1A5D6W6 292 aa7.71□□□□□ -1.18
C11orf54-203ENST00000526335 WASH4PA8MWX3 477 aa7.71□□□□□ -1.18
C11orf54-203ENST00000526335 RBAK-RBAKDNI3L0D1 243 aa7.71□□□□□ -1.18
C11orf54-203ENST00000526335 ZEB1P37275 1124 aaPredicted RBP7.71□□□□□ -1.18
C11orf54-203ENST00000526335 HMGA2P52926 109 aa7.71□□□□□ -1.18
C11orf54-203ENST00000526335 MFAP1P55081 439 aaKnown RBP7.71□□□□□ -1.18
C11orf54-203ENST00000526335 TNK2Q07912 1038 aa7.71□□□□□ -1.18
C11orf54-203ENST00000526335 CDH24Q86UP0 819 aa7.71□□□□□ -1.18
C11orf54-203ENST00000526335 ASB16Q96NS5 453 aa7.71□□□□□ -1.18
C11orf54-203ENST00000526335 MENTQ9BUN1 341 aa7.71□□□□□ -1.18
C11orf54-203ENST00000526335 MBD1Q9UIS9 605 aaPredicted RBP7.71□□□□□ -1.18
C11orf54-203ENST00000526335 K7ESM1 405 aa7.7□□□□□ -1.18
C11orf54-203ENST00000526335 PRICKLE3O43900 615 aaPredicted RBP7.7□□□□□ -1.18
C11orf54-203ENST00000526335 ZGLP1P0C6A0 271 aa7.7□□□□□ -1.18
C11orf54-203ENST00000526335 SRSF3P84103 164 aaKnown RBP7.7□□□□□ -1.18
C11orf54-203ENST00000526335 ZNF827Q17R98 1081 aa7.7□□□□□ -1.18
C11orf54-203ENST00000526335 RGS22Q8NE09 1264 aa7.7□□□□□ -1.18
C11orf54-203ENST00000526335 EPB41L4AQ9HCS5 686 aaPredicted RBP7.7□□□□□ -1.18
C11orf54-203ENST00000526335 GPR160Q9UJ42 338 aa7.7□□□□□ -1.18
C11orf54-203ENST00000526335 CILPO75339 1184 aa7.69□□□□□ -1.18
C11orf54-203ENST00000526335 EPHB3P54753 998 aa7.69□□□□□ -1.18
C11orf54-203ENST00000526335 PIWIL2Q8TC59 973 aaKnown RBP7.69□□□□□ -1.18
C11orf54-203ENST00000526335 SIRT5Q9NXA8 310 aa7.69□□□□□ -1.18
C11orf54-203ENST00000526335 ETV3P41162 512 aa7.68□□□□□ -1.18
C11orf54-203ENST00000526335 PPP1R13LQ8WUF5 828 aa7.68□□□□□ -1.18
C11orf54-203ENST00000526335 FRMD6Q96NE9 622 aa7.68□□□□□ -1.18
C11orf54-203ENST00000526335 DPH2Q9BQC3 489 aaPredicted RBP7.68□□□□□ -1.18
C11orf54-203ENST00000526335 TACC3Q9Y6A5 838 aa7.68□□□□□ -1.18
C11orf54-203ENST00000526335 OR14I1A6ND48 311 aa7.67□□□□□ -1.18
C11orf54-203ENST00000526335 PATL2C9JE40 543 aaKnown RBP7.67□□□□□ -1.18
C11orf54-203ENST00000526335 MATN3O15232 486 aa7.67□□□□□ -1.18
C11orf54-203ENST00000526335 GALK1P51570 392 aa7.67□□□□□ -1.18
C11orf54-203ENST00000526335 RPS26P62854 115 aaKnown RBP7.67□□□□□ -1.18
C11orf54-203ENST00000526335 SEPT6Q14141 434 aa7.67□□□□□ -1.18
C11orf54-203ENST00000526335 NR0B2Q15466 257 aa7.67□□□□□ -1.18
C11orf54-203ENST00000526335 CNKSR3Q6P9H4 555 aa7.67□□□□□ -1.18
C11orf54-203ENST00000526335 TJP2Q9UDY2 1190 aa7.67□□□□□ -1.18
C11orf54-203ENST00000526335 MYO15BQ96JP2 1530 aa7.67□□□□□ -1.18
C11orf54-203ENST00000526335 PGRP06401 933 aa7.66□□□□□ -1.18
C11orf54-203ENST00000526335 KCNA1Q09470 495 aa7.66□□□□□ -1.18
C11orf54-203ENST00000526335 CCDC85BQ15834 202 aaPredicted RBP7.66□□□□□ -1.18
C11orf54-203ENST00000526335 MRPL41Q8IXM3 137 aaKnown RBP7.66□□□□□ -1.18
C11orf54-203ENST00000526335 PCDHB5Q9Y5E4 795 aa7.66□□□□□ -1.18
C11orf54-203ENST00000526335 GFRA2O00451 464 aa7.65□□□□□ -1.18
C11orf54-203ENST00000526335 LDHBP07195 334 aaKnown RBP7.65□□□□□ -1.18
C11orf54-203ENST00000526335 EIF4BP23588 611 aaKnown RBP7.65□□□□□ -1.18
C11orf54-203ENST00000526335 TPP2P29144 1249 aaPredicted RBP7.65□□□□□ -1.18
C11orf54-203ENST00000526335 EGR3Q06889 387 aa7.65□□□□□ -1.18
C11orf54-203ENST00000526335 SNX17Q15036 470 aa7.65□□□□□ -1.18
C11orf54-203ENST00000526335 TMEM87BQ96K49 555 aa7.65□□□□□ -1.18
C11orf54-203ENST00000526335 CNOT11Q9UKZ1 510 aaKnown RBP7.65□□□□□ -1.18
C11orf54-203ENST00000526335 CCDC180Q9P1Z9 1646 aa7.65□□□□□ -1.19
C11orf54-203ENST00000526335 N4BP3O15049 544 aa7.64□□□□□ -1.19
C11orf54-203ENST00000526335 P4HBP07237 508 aaKnown RBP7.64□□□□□ -1.19
C11orf54-203ENST00000526335 SLC6A19Q695T7 634 aa7.64□□□□□ -1.19
C11orf54-203ENST00000526335 DHX38Q92620 1227 aaKnown RBP7.64□□□□□ -1.19
C11orf54-203ENST00000526335 TRIT1Q9H3H1 467 aaKnown RBP7.64□□□□□ -1.19
C11orf54-203ENST00000526335 MAGEA10P43363 369 aaPredicted RBP7.63□□□□□ -1.19
C11orf54-203ENST00000526335 PDE4BQ07343 736 aa7.63□□□□□ -1.19
C11orf54-203ENST00000526335 ADGRF1Q5T601 910 aa7.63□□□□□ -1.19
C11orf54-203ENST00000526335 SPPL2CQ8IUH8 684 aa7.63□□□□□ -1.19
C11orf54-203ENST00000526335 LINC01356Q8N9X3 169 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms