RNA–Protein interactions for RNA: ENST00000526191.1

COPB1-204, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-204ENST00000526191 REXO1Q8N1G1 1221 aaKnown RBP9.28□□□□□ -0.92
COPB1-204ENST00000526191 RNF34Q969K3 372 aa9.28□□□□□ -0.92
COPB1-204ENST00000526191 VWCEQ96DN2 955 aa9.28□□□□□ -0.92
COPB1-204ENST00000526191 ATG4CQ96DT6 458 aa9.28□□□□□ -0.92
COPB1-204ENST00000526191 ALPK1Q96QP1 1244 aa9.28□□□□□ -0.92
COPB1-204ENST00000526191 ASPNQ9BXN1 380 aa9.28□□□□□ -0.92
COPB1-204ENST00000526191 TRIT1Q9H3H1 467 aaKnown RBP9.28□□□□□ -0.92
COPB1-204ENST00000526191 ABCC9O60706 1549 aa9.27□□□□□ -0.93
COPB1-204ENST00000526191 DNAJC25-GNG10A0A024R161 153 aa9.27□□□□□ -0.93
COPB1-204ENST00000526191 SHISA3A0PJX4 238 aa9.27□□□□□ -0.93
COPB1-204ENST00000526191 RACK1P63244 317 aaKnown RBP9.27□□□□□ -0.93
COPB1-204ENST00000526191 RALGPS1Q5JS13 557 aa9.27□□□□□ -0.93
COPB1-204ENST00000526191 CDCP2Q5VXM1 449 aa9.27□□□□□ -0.93
COPB1-204ENST00000526191 TSPYL5Q86VY4 417 aaPredicted RBP9.27□□□□□ -0.93
COPB1-204ENST00000526191 CNNM2Q9H8M5 875 aa9.27□□□□□ -0.93
COPB1-204ENST00000526191 GPATCH2Q9NW75 528 aa9.27□□□□□ -0.93
COPB1-204ENST00000526191 DUSP13Q9UII6 198 aa9.27□□□□□ -0.93
COPB1-204ENST00000526191 VAMP1P23763 118 aa9.26□□□□□ -0.93
COPB1-204ENST00000526191 ZNF165P49910 485 aa9.26□□□□□ -0.93
COPB1-204ENST00000526191 GOLGA2P5Q9HBQ8 144 aa9.26□□□□□ -0.93
COPB1-204ENST00000526191 CHMP4BP1P59074 171 aa9.25□□□□□ -0.93
COPB1-204ENST00000526191 NLRC3Q7RTR2 1065 aa9.25□□□□□ -0.93
COPB1-204ENST00000526191 ZSWIM9Q86XI8 627 aa9.25□□□□□ -0.93
COPB1-204ENST00000526191 TMEM40Q8WWA1 233 aa9.25□□□□□ -0.93
COPB1-204ENST00000526191 SCAMP3O14828 347 aaKnown RBP9.24□□□□□ -0.93
COPB1-204ENST00000526191 GDNFP39905 211 aa9.24□□□□□ -0.93
COPB1-204ENST00000526191 EGR3Q06889 387 aa9.24□□□□□ -0.93
COPB1-204ENST00000526191 DDX41Q9UJV9 622 aaKnown RBP9.24□□□□□ -0.93
COPB1-204ENST00000526191 PCDHA11Q9Y5I1 949 aa9.24□□□□□ -0.93
COPB1-204ENST00000526191 NME1P15531 152 aaKnown RBP9.23□□□□□ -0.93
COPB1-204ENST00000526191 AFMP43652 599 aa9.23□□□□□ -0.93
COPB1-204ENST00000526191 KCNMB1Q16558 191 aa9.23□□□□□ -0.93
COPB1-204ENST00000526191 TTC6Q86TZ1 520 aa9.23□□□□□ -0.93
COPB1-204ENST00000526191 MRRFQ96E11 262 aaKnown RBP9.23□□□□□ -0.93
COPB1-204ENST00000526191 ZNF512BQ96KM6 892 aaPredicted RBP9.23□□□□□ -0.93
COPB1-204ENST00000526191 ADAMTS10Q9H324 1103 aa9.23□□□□□ -0.93
COPB1-204ENST00000526191 UNCXA6NJT0 531 aa9.22□□□□□ -0.93
COPB1-204ENST00000526191 MEIS3P2A8K0S8 358 aa9.22□□□□□ -0.93
COPB1-204ENST00000526191 LTKP29376 864 aa9.22□□□□□ -0.93
COPB1-204ENST00000526191 HK2P52789 917 aa9.22□□□□□ -0.93
COPB1-204ENST00000526191 ERVFC1P60507 584 aa9.22□□□□□ -0.93
COPB1-204ENST00000526191 SNW1Q13573 536 aaKnown RBP9.22□□□□□ -0.93
COPB1-204ENST00000526191 NBPF12Q5TAG4 269 aaPredicted RBP9.22□□□□□ -0.93
COPB1-204ENST00000526191 METTL16Q86W50 562 aaKnown RBP9.22□□□□□ -0.93
COPB1-204ENST00000526191 POU5F2Q8N7G0 328 aa9.22□□□□□ -0.93
COPB1-204ENST00000526191 RGS22Q8NE09 1264 aa9.22□□□□□ -0.93
COPB1-204ENST00000526191 KIRREL1Q96J84 757 aa9.22□□□□□ -0.93
COPB1-204ENST00000526191 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.22□□□□□ -0.93
COPB1-204ENST00000526191 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.22□□□□□ -0.93
COPB1-204ENST00000526191 KIAA1522Q9P206 1035 aaPredicted RBP9.22□□□□□ -0.93
COPB1-204ENST00000526191 TMEM59LQ9UK28 342 aa9.22□□□□□ -0.93
COPB1-204ENST00000526191 ZNF503-AS2A6NEH8 195 aa9.21□□□□□ -0.94
COPB1-204ENST00000526191 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.21□□□□□ -0.94
COPB1-204ENST00000526191 RNF4P78317 190 aa9.21□□□□□ -0.94
COPB1-204ENST00000526191 CLEC16AQ2KHT3 1053 aa9.21□□□□□ -0.94
COPB1-204ENST00000526191 ZNRF3Q9ULT6 936 aa9.21□□□□□ -0.94
COPB1-204ENST00000526191 TNFRSF10CO14798 259 aa9.2□□□□□ -0.94
COPB1-204ENST00000526191 NMIQ13287 307 aaPredicted RBP9.2□□□□□ -0.94
COPB1-204ENST00000526191 LRRFIP1Q32MZ4 808 aaKnown RBP9.2□□□□□ -0.94
COPB1-204ENST00000526191 TMC3Q7Z5M5 1100 aa9.2□□□□□ -0.94
COPB1-204ENST00000526191 TMEM192Q8IY95 271 aa9.2□□□□□ -0.94
COPB1-204ENST00000526191 LIN37Q96GY3 246 aaPredicted RBP9.2□□□□□ -0.94
COPB1-204ENST00000526191 CCDC120Q96HB5 630 aa9.2□□□□□ -0.94
COPB1-204ENST00000526191 SLC9A7Q96T83 725 aa9.2□□□□□ -0.94
COPB1-204ENST00000526191 FAM86C2PA6NEL3 165 aa9.19□□□□□ -0.94
COPB1-204ENST00000526191 CLEC3AO75596 197 aa9.19□□□□□ -0.94
COPB1-204ENST00000526191 HDLBPQ00341 1268 aaKnown RBP9.19□□□□□ -0.94
COPB1-204ENST00000526191 NBPF9Q3BBW0 867 aa9.19□□□□□ -0.94
COPB1-204ENST00000526191 ZNF648Q5T619 568 aaPredicted RBP9.19□□□□□ -0.94
COPB1-204ENST00000526191 C9orf131Q5VYM1 1079 aa9.19□□□□□ -0.94
COPB1-204ENST00000526191 HDAC8Q9BY41 377 aa9.19□□□□□ -0.94
COPB1-204ENST00000526191 PAK2Q13177 524 aa9.18□□□□□ -0.94
COPB1-204ENST00000526191 SLC6A18Q96N87 628 aa9.18□□□□□ -0.94
COPB1-204ENST00000526191 FERD3LQ96RJ6 166 aa9.18□□□□□ -0.94
COPB1-204ENST00000526191 PPT2Q9UMR5 302 aa9.18□□□□□ -0.94
COPB1-204ENST00000526191 GLI1P08151 1106 aa9.17□□□□□ -0.94
COPB1-204ENST00000526191 ZGLP1P0C6A0 271 aa9.17□□□□□ -0.94
COPB1-204ENST00000526191 ACRP10323 421 aa9.17□□□□□ -0.94
COPB1-204ENST00000526191 CCNFP41002 786 aa9.17□□□□□ -0.94
COPB1-204ENST00000526191 TEKQ02763 1124 aa9.17□□□□□ -0.94
COPB1-204ENST00000526191 RAD51AP2Q09MP3 1159 aa9.17□□□□□ -0.94
COPB1-204ENST00000526191 TMEM67Q5HYA8 995 aa9.17□□□□□ -0.94
COPB1-204ENST00000526191 LCE3BQ5TA77 95 aa9.17□□□□□ -0.94
COPB1-204ENST00000526191 ZNF654Q8IZM8 581 aa9.17□□□□□ -0.94
COPB1-204ENST00000526191 ASCC2Q9H1I8 757 aaPredicted RBP9.17□□□□□ -0.94
COPB1-204ENST00000526191 MINPP1Q9UNW1 487 aa9.17□□□□□ -0.94
COPB1-204ENST00000526191 LRRC10BA6NIK2 292 aa9.16□□□□□ -0.94
COPB1-204ENST00000526191 HPXP02790 462 aa9.16□□□□□ -0.94
COPB1-204ENST00000526191 RAC2P15153 192 aa9.16□□□□□ -0.94
COPB1-204ENST00000526191 TRHRP34981 398 aaPredicted RBP9.16□□□□□ -0.94
COPB1-204ENST00000526191 MLANAQ16655 118 aa9.16□□□□□ -0.94
COPB1-204ENST00000526191 FBXW10Q5XX13 1052 aa9.16□□□□□ -0.94
COPB1-204ENST00000526191 NT5DC4Q86YG4 428 aa9.16□□□□□ -0.94
COPB1-204ENST00000526191 KRTAP1-3Q8IUG1 177 aa9.16□□□□□ -0.94
COPB1-204ENST00000526191 SYTL5Q8TDW5 730 aaPredicted RBP9.16□□□□□ -0.94
COPB1-204ENST00000526191 PRDM14Q9GZV8 571 aa9.16□□□□□ -0.94
COPB1-204ENST00000526191 C8AP07357 584 aa9.15□□□□□ -0.94
COPB1-204ENST00000526191 ABHD4Q8TB40 342 aa9.15□□□□□ -0.94
COPB1-204ENST00000526191 TCTN2Q96GX1 697 aa9.15□□□□□ -0.94
COPB1-204ENST00000526191 MKRN2Q9H000 416 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms