RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 GRM2Q14416 872 aa4.16□□□□□ -1.74
TRAPPC4-207ENST00000526141 SFRP5Q5T4F7 317 aa4.16□□□□□ -1.74
TRAPPC4-207ENST00000526141 CDKAL1Q5VV42 579 aa4.16□□□□□ -1.74
TRAPPC4-207ENST00000526141 MORC4Q8TE76 937 aa4.16□□□□□ -1.74
TRAPPC4-207ENST00000526141 CSRNP1Q96S65 589 aa4.16□□□□□ -1.74
TRAPPC4-207ENST00000526141 PRDM16Q9HAZ2 1276 aa4.16□□□□□ -1.74
TRAPPC4-207ENST00000526141 CBX8Q9HC52 389 aa4.16□□□□□ -1.74
TRAPPC4-207ENST00000526141 PARD6AQ9NPB6 346 aa4.16□□□□□ -1.74
TRAPPC4-207ENST00000526141 PCDH12Q9NPG4 1184 aa4.16□□□□□ -1.74
TRAPPC4-207ENST00000526141 RNF19AQ9NV58 838 aa4.16□□□□□ -1.74
TRAPPC4-207ENST00000526141 TPX2Q9ULW0 747 aaKnown RBP4.16□□□□□ -1.74
TRAPPC4-207ENST00000526141 JAG2Q9Y219 1238 aa4.16□□□□□ -1.74
TRAPPC4-207ENST00000526141 SAMM50Q9Y512 469 aa4.16□□□□□ -1.74
TRAPPC4-207ENST00000526141 CCDC194A0A1B0GVG4 234 aa4.15□□□□□ -1.75
TRAPPC4-207ENST00000526141 H3BS24 57 aa4.15□□□□□ -1.75
TRAPPC4-207ENST00000526141 GPR182O15218 404 aa4.15□□□□□ -1.75
TRAPPC4-207ENST00000526141 DNAJC6O75061 913 aa4.15□□□□□ -1.75
TRAPPC4-207ENST00000526141 GJA8P48165 433 aa4.15□□□□□ -1.75
TRAPPC4-207ENST00000526141 RING1Q06587 406 aa4.15□□□□□ -1.75
TRAPPC4-207ENST00000526141 ZNF252P-AS1Q0IIN9 211 aa4.15□□□□□ -1.75
TRAPPC4-207ENST00000526141 TTC6Q86TZ1 520 aa4.15□□□□□ -1.75
TRAPPC4-207ENST00000526141 USP48Q86UV5 1035 aa4.15□□□□□ -1.75
TRAPPC4-207ENST00000526141 CKAP2LQ8IYA6 745 aa4.15□□□□□ -1.75
TRAPPC4-207ENST00000526141 ZNF507Q8TCN5 953 aa4.15□□□□□ -1.75
TRAPPC4-207ENST00000526141 FBF1Q8TES7 1133 aa4.15□□□□□ -1.75
TRAPPC4-207ENST00000526141 MYLIPQ8WY64 445 aa4.15□□□□□ -1.75
TRAPPC4-207ENST00000526141 MKL1Q969V6 931 aa4.15□□□□□ -1.75
TRAPPC4-207ENST00000526141 COX4I2Q96KJ9 171 aa4.15□□□□□ -1.75
TRAPPC4-207ENST00000526141 C20orf173Q96LM9 149 aa4.15□□□□□ -1.75
TRAPPC4-207ENST00000526141 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.15□□□□□ -1.753e-8■■■□□ 16.3
TRAPPC4-207ENST00000526141 ZCCHC4Q9H5U6 513 aa4.15□□□□□ -1.75
TRAPPC4-207ENST00000526141 CACNA2D2Q9NY47 1150 aa4.15□□□□□ -1.75
TRAPPC4-207ENST00000526141 CHPF2Q9P2E5 772 aa4.15□□□□□ -1.75
TRAPPC4-207ENST00000526141 WWC3Q9ULE0 1092 aa4.15□□□□□ -1.75
TRAPPC4-207ENST00000526141 FAN1Q9Y2M0 1017 aa4.15□□□□□ -1.75
TRAPPC4-207ENST00000526141 CSADQ9Y600 493 aa4.15□□□□□ -1.75
TRAPPC4-207ENST00000526141 PNMA6FA0A0J9YX94 578 aa4.14□□□□□ -1.75
TRAPPC4-207ENST00000526141 TRIM37O94972 964 aa4.14□□□□□ -1.75
TRAPPC4-207ENST00000526141 NTF4P34130 210 aa4.14□□□□□ -1.75
TRAPPC4-207ENST00000526141 RACK1P63244 317 aaKnown RBP4.14□□□□□ -1.75
TRAPPC4-207ENST00000526141 SERINC3Q13530 473 aa4.14□□□□□ -1.75
TRAPPC4-207ENST00000526141 PLEKHG6Q3KR16 790 aa4.14□□□□□ -1.75
TRAPPC4-207ENST00000526141 ZNF394Q53GI3 561 aa4.14□□□□□ -1.75
TRAPPC4-207ENST00000526141 ZBTB37Q5TC79 503 aa4.14□□□□□ -1.75
TRAPPC4-207ENST00000526141 SCARA3Q6AZY7 606 aa4.14□□□□□ -1.75
TRAPPC4-207ENST00000526141 TMED8Q6PL24 325 aaPredicted RBP4.14□□□□□ -1.75
TRAPPC4-207ENST00000526141 ARMCX6Q7L4S7 300 aa4.14□□□□□ -1.75
TRAPPC4-207ENST00000526141 HS2ST1Q7LGA3 356 aa4.14□□□□□ -1.75
TRAPPC4-207ENST00000526141 FILIP1Q7Z7B0 1213 aa4.14□□□□□ -1.75
TRAPPC4-207ENST00000526141 C12orf40Q86WS4 652 aa4.14□□□□□ -1.75
TRAPPC4-207ENST00000526141 MFSD2AQ8NA29 543 aa4.14□□□□□ -1.75
TRAPPC4-207ENST00000526141 STK35Q8TDR2 534 aa4.14□□□□□ -1.75
TRAPPC4-207ENST00000526141 KRTAP17-1Q9BYP8 105 aa4.14□□□□□ -1.75
TRAPPC4-207ENST00000526141 IRF2BPLQ9H1B7 796 aa4.14□□□□□ -1.75
TRAPPC4-207ENST00000526141 SPC25Q9HBM1 224 aa4.14□□□□□ -1.75
TRAPPC4-207ENST00000526141 IFT57Q9NWB7 429 aa4.14□□□□□ -1.75
TRAPPC4-207ENST00000526141 SLAMF8Q9P0V8 285 aa4.14□□□□□ -1.75
TRAPPC4-207ENST00000526141 PRKAB1Q9Y478 270 aa4.14□□□□□ -1.75
TRAPPC4-207ENST00000526141 PCDHGB7Q9Y5F8 929 aa4.14□□□□□ -1.75
TRAPPC4-207ENST00000526141 DCDC2CA8MYV0 355 aa4.13□□□□□ -1.75
TRAPPC4-207ENST00000526141 PPP1R12AO14974 1030 aaPredicted RBP4.13□□□□□ -1.75
TRAPPC4-207ENST00000526141 U2SURPO15042 1029 aaKnown RBP4.13□□□□□ -1.75
TRAPPC4-207ENST00000526141 FOXD2O60548 495 aaPredicted RBP4.13□□□□□ -1.75
TRAPPC4-207ENST00000526141 MAP4K4O95819 1239 aaPredicted RBP4.13□□□□□ -1.75
TRAPPC4-207ENST00000526141 SYN1P17600 705 aa4.13□□□□□ -1.75
TRAPPC4-207ENST00000526141 BMP7P18075 431 aa4.13□□□□□ -1.75
TRAPPC4-207ENST00000526141 ATF4P18848 351 aaPredicted RBP4.13□□□□□ -1.75
TRAPPC4-207ENST00000526141 CYP7A1P22680 504 aa4.13□□□□□ -1.75
TRAPPC4-207ENST00000526141 LRRC14Q15048 493 aa4.13□□□□□ -1.75
TRAPPC4-207ENST00000526141 PLEKHG4Q58EX7 1191 aa4.13□□□□□ -1.75
TRAPPC4-207ENST00000526141 TAF7LQ5H9L4 462 aa4.13□□□□□ -1.75
TRAPPC4-207ENST00000526141 TMPRSS7Q7RTY8 843 aa4.13□□□□□ -1.75
TRAPPC4-207ENST00000526141 RPUSD2Q8IZ73 545 aaKnown RBP4.13□□□□□ -1.75
TRAPPC4-207ENST00000526141 EPS8L3Q8TE67 593 aaKnown RBP4.13□□□□□ -1.75
TRAPPC4-207ENST00000526141 SETDB2Q96T68 719 aa4.13□□□□□ -1.75
TRAPPC4-207ENST00000526141 NIF3L1Q9GZT8 377 aa4.13□□□□□ -1.75
TRAPPC4-207ENST00000526141 TMEM59LQ9UK28 342 aa4.13□□□□□ -1.75
TRAPPC4-207ENST00000526141 AKAP2Q9Y2D5 859 aa4.13□□□□□ -1.75
TRAPPC4-207ENST00000526141 ST14Q9Y5Y6 855 aa4.13□□□□□ -1.75
TRAPPC4-207ENST00000526141 AK5Q9Y6K8 562 aa4.13□□□□□ -1.75
TRAPPC4-207ENST00000526141 CAPN6Q9Y6Q1 641 aa4.13□□□□□ -1.75
TRAPPC4-207ENST00000526141 PRR33A8MZF0 331 aa4.12□□□□□ -1.75
TRAPPC4-207ENST00000526141 PEX14O75381 377 aa4.12□□□□□ -1.75
TRAPPC4-207ENST00000526141 EIF3JO75822 258 aaKnown RBP4.12□□□□□ -1.75
TRAPPC4-207ENST00000526141 SLITRK5O94991 958 aa4.12□□□□□ -1.75
TRAPPC4-207ENST00000526141 S100BP04271 92 aaPredicted RBP4.12□□□□□ -1.75
TRAPPC4-207ENST00000526141 CTSHP09668 335 aa4.12□□□□□ -1.75
TRAPPC4-207ENST00000526141 KIR3DL1P43629 444 aa4.12□□□□□ -1.75
TRAPPC4-207ENST00000526141 UBE3DQ7Z6J8 389 aa4.12□□□□□ -1.75
TRAPPC4-207ENST00000526141 CCAR1Q8IX12 1150 aaKnown RBP4.12□□□□□ -1.75
TRAPPC4-207ENST00000526141 SMC5Q8IY18 1101 aa4.12□□□□□ -1.75
TRAPPC4-207ENST00000526141 BAHD1Q8TBE0 780 aaPredicted RBP4.12□□□□□ -1.75
TRAPPC4-207ENST00000526141 UBE2FQ969M7 185 aa4.12□□□□□ -1.75
TRAPPC4-207ENST00000526141 ELMO3Q96BJ8 720 aa4.12□□□□□ -1.75
TRAPPC4-207ENST00000526141 GPRASP2Q96D09 838 aa4.12□□□□□ -1.75
TRAPPC4-207ENST00000526141 BCO2Q9BYV7 579 aa4.12□□□□□ -1.75
TRAPPC4-207ENST00000526141 CEP44Q9C0F1 390 aa4.12□□□□□ -1.75
TRAPPC4-207ENST00000526141 KCNK12Q9HB15 430 aa4.12□□□□□ -1.75
TRAPPC4-207ENST00000526141 TYW1Q9NV66 732 aaKnown RBP4.12□□□□□ -1.75
TRAPPC4-207ENST00000526141 DDX56Q9NY93 547 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms