RNA–Protein interactions for RNA: ENST00000525936.1

EXOSC4-202, Transcript of exosome component 4, humanhuman

TSL 3 BASIC

Gene EXOSC4, Length 606 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-202ENST00000525936 STAG1Q8WVM7 1258 aa23.45■■□□□ 1.34
EXOSC4-202ENST00000525936 CTNNA3Q9UI47 895 aa23.45■■□□□ 1.34
EXOSC4-202ENST00000525936 SYNPO2Q9UMS6 1093 aa23.45■■□□□ 1.34
EXOSC4-202ENST00000525936 ZNF213O14771 459 aa23.44■■□□□ 1.34
EXOSC4-202ENST00000525936 HERVK_113P62684 666 aa23.44■■□□□ 1.34
EXOSC4-202ENST00000525936 IRX3P78415 501 aaPredicted RBP23.44■■□□□ 1.34
EXOSC4-202ENST00000525936 TBC1D10CQ8IV04 446 aa23.44■■□□□ 1.34
EXOSC4-202ENST00000525936 ARHGAP39Q9C0H5 1083 aa23.44■■□□□ 1.34
EXOSC4-202ENST00000525936 RPAP3Q9H6T3 665 aaPredicted RBP23.44■■□□□ 1.34
EXOSC4-202ENST00000525936 IL17RBQ9NRM6 502 aa23.44■■□□□ 1.34
EXOSC4-202ENST00000525936 PTH1RQ03431 593 aa23.43■■□□□ 1.34
EXOSC4-202ENST00000525936 FAM110CQ1W6H9 321 aa23.43■■□□□ 1.34
EXOSC4-202ENST00000525936 LBX2Q6XYB7 198 aa23.43■■□□□ 1.34
EXOSC4-202ENST00000525936 ANKRD13CQ8N6S4 541 aa23.43■■□□□ 1.34
EXOSC4-202ENST00000525936 NKX2-3Q8TAU0 364 aa23.43■■□□□ 1.34
EXOSC4-202ENST00000525936 EFCC1Q9HA90 598 aa23.43■■□□□ 1.34
EXOSC4-202ENST00000525936 RBPJLQ9UBG7 517 aa23.43■■□□□ 1.34
EXOSC4-202ENST00000525936 MORF4L1Q9UBU8 362 aa23.43■■□□□ 1.34
EXOSC4-202ENST00000525936 CLIP2Q9UDT6 1046 aa23.43■■□□□ 1.34
EXOSC4-202ENST00000525936 TTLL1O95922 423 aa23.42■■□□□ 1.34
EXOSC4-202ENST00000525936 ATP2B2Q01814 1243 aa23.42■■□□□ 1.34
EXOSC4-202ENST00000525936 MFSD6Q6ZSS7 791 aa23.42■■□□□ 1.34
EXOSC4-202ENST00000525936 MAP4K1Q92918 833 aa23.42■■□□□ 1.34
EXOSC4-202ENST00000525936 LAMA4Q16363 1823 aa23.42■■□□□ 1.34
EXOSC4-202ENST00000525936 TSPY2A6NKD2 308 aa23.41■■□□□ 1.34
EXOSC4-202ENST00000525936 GNRH1P01148 92 aa23.41■■□□□ 1.34
EXOSC4-202ENST00000525936 NT5C2P49902 561 aa23.41■■□□□ 1.34
EXOSC4-202ENST00000525936 ARHGEF6Q15052 776 aa23.41■■□□□ 1.34
EXOSC4-202ENST00000525936 IMMTQ16891 758 aaKnown RBP23.41■■□□□ 1.34
EXOSC4-202ENST00000525936 SPICE1Q8N0Z3 855 aa23.41■■□□□ 1.34
EXOSC4-202ENST00000525936 GTF3C2Q8WUA4 911 aaPredicted RBP23.41■■□□□ 1.34
EXOSC4-202ENST00000525936 TRIM47Q96LD4 638 aa23.41■■□□□ 1.34
EXOSC4-202ENST00000525936 ESYT1Q9BSJ8 1104 aa23.41■■□□□ 1.34
EXOSC4-202ENST00000525936 RNF41Q9H4P4 317 aaPredicted RBP23.41■■□□□ 1.34
EXOSC4-202ENST00000525936 TXNRD2Q9NNW7 524 aa23.41■■□□□ 1.34
EXOSC4-202ENST00000525936 TCP11L1Q9NUJ3 509 aa23.41■■□□□ 1.34
EXOSC4-202ENST00000525936 TRIM17Q9Y577 477 aa23.41■■□□□ 1.34
EXOSC4-202ENST00000525936 RLFQ13129 1914 aa23.4■■□□□ 1.34
EXOSC4-202ENST00000525936 F5H6K3 240 aa23.4■■□□□ 1.34
EXOSC4-202ENST00000525936 WDR46O15213 610 aaKnown RBP23.4■■□□□ 1.34
EXOSC4-202ENST00000525936 RANBP6O60518 1105 aaKnown RBP23.4■■□□□ 1.34
EXOSC4-202ENST00000525936 PSMC4P43686 418 aa23.4■■□□□ 1.34
EXOSC4-202ENST00000525936 KLRC3Q07444 240 aa23.4■■□□□ 1.34
EXOSC4-202ENST00000525936 COG2Q14746 738 aa23.4■■□□□ 1.34
EXOSC4-202ENST00000525936 KIF22Q14807 665 aa23.4■■□□□ 1.34
EXOSC4-202ENST00000525936 FBXO46Q6PJ61 603 aaPredicted RBP23.4■■□□□ 1.34
EXOSC4-202ENST00000525936 GOPCQ9HD26 462 aa23.4■■□□□ 1.34
EXOSC4-202ENST00000525936 ZSWIM8A7E2V4 1837 aa23.39■■□□□ 1.33
EXOSC4-202ENST00000525936 NMT2O60551 498 aa23.39■■□□□ 1.33
EXOSC4-202ENST00000525936 PPP4R3BQ5MIZ7 849 aa23.39■■□□□ 1.33
EXOSC4-202ENST00000525936 GMCL1P1Q8NEA9 526 aa23.39■■□□□ 1.33
EXOSC4-202ENST00000525936 ABHD8Q96I13 439 aa23.39■■□□□ 1.33
EXOSC4-202ENST00000525936 HOXC10Q9NYD6 342 aa23.39■■□□□ 1.33
EXOSC4-202ENST00000525936 PTPN22Q9Y2R2 807 aa23.39■■□□□ 1.33
EXOSC4-202ENST00000525936 SPDYE16A6NNV3 312 aaPredicted RBP23.38■■□□□ 1.33
EXOSC4-202ENST00000525936 CNMDO75829 334 aa23.38■■□□□ 1.33
EXOSC4-202ENST00000525936 LSG1Q9H089 658 aaKnown RBP23.38■■□□□ 1.33
EXOSC4-202ENST00000525936 RABGAP1Q9Y3P9 1069 aa23.38■■□□□ 1.33
EXOSC4-202ENST00000525936 U3KPZ7 1027 aaPredicted RBP23.38■■□□□ 1.33
EXOSC4-202ENST00000525936 NEDD4P46934 1319 aa23.37■■□□□ 1.33
EXOSC4-202ENST00000525936 PEX10O60683 326 aa23.37■■□□□ 1.33
EXOSC4-202ENST00000525936 NDUFB10O96000 172 aa23.37■■□□□ 1.33
EXOSC4-202ENST00000525936 Q3C1V9 767 aa23.37■■□□□ 1.33
EXOSC4-202ENST00000525936 RRP12Q5JTH9 1297 aaKnown RBP23.37■■□□□ 1.33
EXOSC4-202ENST00000525936 GPRC5AQ8NFJ5 357 aa23.37■■□□□ 1.33
EXOSC4-202ENST00000525936 ADAMTS5Q9UNA0 930 aa23.37■■□□□ 1.33
EXOSC4-202ENST00000525936 CENPFP49454 3210 aa23.37■■□□□ 1.33
EXOSC4-202ENST00000525936 MYH4Q9Y623 1939 aa23.37■■□□□ 1.33
EXOSC4-202ENST00000525936 MYPNQ86TC9 1320 aa23.36■■□□□ 1.33
EXOSC4-202ENST00000525936 CYP21A2P08686 494 aa23.36■■□□□ 1.33
EXOSC4-202ENST00000525936 DSG3P32926 999 aa23.36■■□□□ 1.33
EXOSC4-202ENST00000525936 PRMT2P55345 433 aa23.36■■□□□ 1.33
EXOSC4-202ENST00000525936 FCGRTP55899 365 aa23.36■■□□□ 1.33
EXOSC4-202ENST00000525936 ESR2Q92731 530 aa23.36■■□□□ 1.33
EXOSC4-202ENST00000525936 TANGO6Q9C0B7 1094 aa23.36■■□□□ 1.33
EXOSC4-202ENST00000525936 TOMM22Q9NS69 142 aa23.36■■□□□ 1.33
EXOSC4-202ENST00000525936 MGAMO43451 1857 aa23.35■■□□□ 1.33
EXOSC4-202ENST00000525936 CDC45O75419 566 aa23.35■■□□□ 1.33
EXOSC4-202ENST00000525936 FMNL1O95466 1100 aaPredicted RBP23.35■■□□□ 1.33
EXOSC4-202ENST00000525936 ERVK-9P63128 1117 aa23.35■■□□□ 1.33
EXOSC4-202ENST00000525936 ERVK-24P63145 666 aa23.35■■□□□ 1.33
EXOSC4-202ENST00000525936 RCSD1Q6JBY9 416 aa23.35■■□□□ 1.33
EXOSC4-202ENST00000525936 LRRC47Q8N1G4 583 aaKnown RBP23.35■■□□□ 1.33
EXOSC4-202ENST00000525936 BTBD7Q9P203 1132 aa23.35■■□□□ 1.33
EXOSC4-202ENST00000525936 SRRDQ9UH36 339 aa23.35■■□□□ 1.33
EXOSC4-202ENST00000525936 STX8Q9UNK0 236 aa23.35■■□□□ 1.33
EXOSC4-202ENST00000525936 HPS5Q9UPZ3 1129 aa23.35■■□□□ 1.33
EXOSC4-202ENST00000525936 PARP14Q460N5 1801 aa23.34■■□□□ 1.33
EXOSC4-202ENST00000525936 FLOT1O75955 427 aa23.34■■□□□ 1.33
EXOSC4-202ENST00000525936 FAM83BQ5T0W9 1011 aa23.34■■□□□ 1.33
EXOSC4-202ENST00000525936 TTC14Q96N46 770 aa23.34■■□□□ 1.33
EXOSC4-202ENST00000525936 KDM4AO75164 1064 aa23.33■■□□□ 1.33
EXOSC4-202ENST00000525936 HOXD10P28358 340 aa23.33■■□□□ 1.33
EXOSC4-202ENST00000525936 KIAA1211Q6ZU35 1233 aa23.33■■□□□ 1.33
EXOSC4-202ENST00000525936 GMCL1Q96IK5 515 aa23.33■■□□□ 1.33
EXOSC4-202ENST00000525936 NUP88Q99567 741 aaPredicted RBP23.33■■□□□ 1.33
EXOSC4-202ENST00000525936 CNNM2Q9H8M5 875 aa23.33■■□□□ 1.33
EXOSC4-202ENST00000525936 FBXO28Q9NVF7 368 aa23.33■■□□□ 1.33
EXOSC4-202ENST00000525936 ZSWIM5Q9P217 1185 aa23.33■■□□□ 1.33
EXOSC4-202ENST00000525936 RBM8AQ9Y5S9 174 aaKnown RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms