RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 USP17L20D6RJB6 530 aa14.59□□□□□ -0.07
CCS-202ENST00000525435 TLR2O60603 784 aa14.59□□□□□ -0.07
CCS-202ENST00000525435 KDM4AO75164 1064 aa14.59□□□□□ -0.07
CCS-202ENST00000525435 OSBPP22059 807 aa14.59□□□□□ -0.07
CCS-202ENST00000525435 ATP2B2Q01814 1243 aa14.59□□□□□ -0.07
CCS-202ENST00000525435 USP17L24Q0WX57 530 aa14.59□□□□□ -0.07
CCS-202ENST00000525435 KRT32Q14532 448 aa14.59□□□□□ -0.07
CCS-202ENST00000525435 TAF1CQ15572 869 aaPredicted RBP14.59□□□□□ -0.07
CCS-202ENST00000525435 IFFO2Q5TF58 517 aa14.59□□□□□ -0.07
CCS-202ENST00000525435 RALYLQ86SE5 291 aaKnown RBP14.59□□□□□ -0.07
CCS-202ENST00000525435 NEDD4P46934 1319 aa14.59□□□□□ -0.07
CCS-202ENST00000525435 B4E1Z4 1266 aa14.58□□□□□ -0.08
CCS-202ENST00000525435 F5H6K3 240 aa14.58□□□□□ -0.08
CCS-202ENST00000525435 TOP1P11387 765 aaKnown RBP14.58□□□□□ -0.08
CCS-202ENST00000525435 HSPA4P34932 840 aa14.58□□□□□ -0.08
CCS-202ENST00000525435 KLRC3Q07444 240 aa14.58□□□□□ -0.08
CCS-202ENST00000525435 TREML2Q5T2D2 321 aa14.58□□□□□ -0.08
CCS-202ENST00000525435 GMCL1P1Q8NEA9 526 aa14.58□□□□□ -0.08
CCS-202ENST00000525435 GTF3C2Q8WUA4 911 aaPredicted RBP14.58□□□□□ -0.08
CCS-202ENST00000525435 USP26Q9BXU7 913 aa14.58□□□□□ -0.08
CCS-202ENST00000525435 HOXC10Q9NYD6 342 aa14.58□□□□□ -0.08
CCS-202ENST00000525435 STX8Q9UNK0 236 aa14.58□□□□□ -0.08
CCS-202ENST00000525435 WDR46O15213 610 aaKnown RBP14.57□□□□□ -0.08
CCS-202ENST00000525435 VCAM1P19320 739 aa14.57□□□□□ -0.08
CCS-202ENST00000525435 GCLCP48506 637 aaPredicted RBP14.57□□□□□ -0.08
CCS-202ENST00000525435 CRHR2Q13324 411 aa14.57□□□□□ -0.08
CCS-202ENST00000525435 CATSPERGQ6ZRH7 1159 aa14.57□□□□□ -0.08
CCS-202ENST00000525435 CLEC10AQ8IUN9 316 aa14.57□□□□□ -0.08
CCS-202ENST00000525435 ZSCAN10Q96SZ4 725 aaPredicted RBP14.57□□□□□ -0.08
CCS-202ENST00000525435 UBAC1Q9BSL1 405 aa14.57□□□□□ -0.08
CCS-202ENST00000525435 ASCC2Q9H1I8 757 aaPredicted RBP14.57□□□□□ -0.08
CCS-202ENST00000525435 LAMB1P07942 1786 aa14.56□□□□□ -0.08
CCS-202ENST00000525435 GPR25O00155 361 aa14.56□□□□□ -0.08
CCS-202ENST00000525435 FOXN1O15353 648 aa14.56□□□□□ -0.08
CCS-202ENST00000525435 NMT2O60551 498 aa14.56□□□□□ -0.08
CCS-202ENST00000525435 TBC1D8O95759 1140 aa14.56□□□□□ -0.08
CCS-202ENST00000525435 HMGB1P09429 215 aaKnown RBP14.56□□□□□ -0.08
CCS-202ENST00000525435 MCM5P33992 734 aa14.56□□□□□ -0.08
CCS-202ENST00000525435 IRX3P78415 501 aaPredicted RBP14.56□□□□□ -0.08
CCS-202ENST00000525435 COG2Q14746 738 aa14.56□□□□□ -0.08
CCS-202ENST00000525435 SART3Q15020 963 aaKnown RBP14.56□□□□□ -0.08
CCS-202ENST00000525435 ZYXQ15942 572 aaKnown RBP14.56□□□□□ -0.08
CCS-202ENST00000525435 RCSD1Q6JBY9 416 aa14.56□□□□□ -0.08
CCS-202ENST00000525435 LBX2Q6XYB7 198 aa14.56□□□□□ -0.08
CCS-202ENST00000525435 RPAP3Q9H6T3 665 aaPredicted RBP14.56□□□□□ -0.08
CCS-202ENST00000525435 PRDM10Q9NQV6 1147 aa14.56□□□□□ -0.08
CCS-202ENST00000525435 PHIPQ8WWQ0 1821 aa14.55□□□□□ -0.08
CCS-202ENST00000525435 NDUFB10O96000 172 aa14.55□□□□□ -0.08
CCS-202ENST00000525435 HSPA8P11142 646 aaKnown RBP14.55□□□□□ -0.08
CCS-202ENST00000525435 MCCP23508 829 aa14.55□□□□□ -0.08
CCS-202ENST00000525435 C17orf99Q6UX52 265 aa14.55□□□□□ -0.08
CCS-202ENST00000525435 STOX1Q6ZVD7 989 aa14.55□□□□□ -0.08
CCS-202ENST00000525435 MB21D2Q8IYB1 491 aaPredicted RBP14.55□□□□□ -0.08
CCS-202ENST00000525435 TMTC2Q8N394 836 aa14.55□□□□□ -0.08
CCS-202ENST00000525435 SMCR8Q8TEV9 937 aaPredicted RBP14.55□□□□□ -0.08
CCS-202ENST00000525435 GMCL1Q96IK5 515 aa14.55□□□□□ -0.08
CCS-202ENST00000525435 TMEM47Q9BQJ4 181 aa14.55□□□□□ -0.08
CCS-202ENST00000525435 TAF6LQ9Y6J9 622 aa14.55□□□□□ -0.08
CCS-202ENST00000525435 MYPNQ86TC9 1320 aa14.55□□□□□ -0.08
CCS-202ENST00000525435 ERICH2A1L162 156 aa14.54□□□□□ -0.08
CCS-202ENST00000525435 PLA2G6O60733 806 aa14.54□□□□□ -0.08
CCS-202ENST00000525435 CYP2C8P10632 490 aa14.54□□□□□ -0.08
CCS-202ENST00000525435 DGKZQ13574 1117 aa14.54□□□□□ -0.08
CCS-202ENST00000525435 ARHGEF6Q15052 776 aa14.54□□□□□ -0.08
CCS-202ENST00000525435 KIAA1755Q5JYT7 1200 aa14.54□□□□□ -0.08
CCS-202ENST00000525435 SLFN13Q68D06 897 aa14.54□□□□□ -0.08
CCS-202ENST00000525435 RASEFQ8IZ41 740 aa14.54□□□□□ -0.08
CCS-202ENST00000525435 SPICE1Q8N0Z3 855 aa14.54□□□□□ -0.08
CCS-202ENST00000525435 ENAHQ8N8S7 591 aaPredicted RBP14.54□□□□□ -0.08
CCS-202ENST00000525435 NKX2-3Q8TAU0 364 aa14.54□□□□□ -0.08
CCS-202ENST00000525435 TMEM87BQ96K49 555 aa14.54□□□□□ -0.08
CCS-202ENST00000525435 NEK1Q96PY6 1258 aa14.54□□□□□ -0.08
CCS-202ENST00000525435 P2RX7Q99572 595 aaKnown RBP14.54□□□□□ -0.08
CCS-202ENST00000525435 R3HDMLQ9H3Y0 253 aa14.54□□□□□ -0.08
CCS-202ENST00000525435 WDR19Q8NEZ3 1342 aa14.54□□□□□ -0.08
CCS-202ENST00000525435 ADGRA2Q96PE1 1338 aa14.54□□□□□ -0.08
CCS-202ENST00000525435 ATAD5Q96QE3 1844 aa14.54□□□□□ -0.08
CCS-202ENST00000525435 GREB1LQ9C091 1923 aaPredicted RBP14.53□□□□□ -0.08
CCS-202ENST00000525435 TNKSO95271 1327 aa14.53□□□□□ -0.08
CCS-202ENST00000525435 IFIT3O14879 490 aaKnown RBP14.53□□□□□ -0.08
CCS-202ENST00000525435 FKTNO75072 461 aa14.53□□□□□ -0.08
CCS-202ENST00000525435 BCRP11274 1271 aa14.53□□□□□ -0.08
CCS-202ENST00000525435 PSMA5P28066 241 aa14.53□□□□□ -0.08
CCS-202ENST00000525435 SLC1A4P43007 532 aa14.53□□□□□ -0.08
CCS-202ENST00000525435 HERVK_113P62684 666 aa14.53□□□□□ -0.08
CCS-202ENST00000525435 SP3Q02447 781 aa14.53□□□□□ -0.08
CCS-202ENST00000525435 SEC23AQ15436 765 aa14.53□□□□□ -0.08
CCS-202ENST00000525435 CYB5R4Q7L1T6 521 aa14.53□□□□□ -0.08
CCS-202ENST00000525435 DHX32Q7L7V1 743 aaKnown RBP14.53□□□□□ -0.08
CCS-202ENST00000525435 MB21D1Q8N884 522 aa14.53□□□□□ -0.08
CCS-202ENST00000525435 IGDCC4Q8TDY8 1250 aa14.53□□□□□ -0.08
CCS-202ENST00000525435 CHURC1Q8WUH1 139 aa14.53□□□□□ -0.08
CCS-202ENST00000525435 DCAF4Q8WV16 495 aa14.53□□□□□ -0.08
CCS-202ENST00000525435 TANGO6Q9C0B7 1094 aa14.53□□□□□ -0.08
CCS-202ENST00000525435 FEM1BQ9UK73 627 aa14.53□□□□□ -0.08
CCS-202ENST00000525435 ADAMTS5Q9UNA0 930 aa14.53□□□□□ -0.08
CCS-202ENST00000525435 RABGAP1Q9Y3P9 1069 aa14.53□□□□□ -0.08
CCS-202ENST00000525435 FLOT1O75955 427 aa14.52□□□□□ -0.09
CCS-202ENST00000525435 FDX1P10109 184 aa14.52□□□□□ -0.09
CCS-202ENST00000525435 BMP3P12645 472 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms