RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 TRPV1Q8NER1 839 aa29■■■□□ 2.23
USP47-205ENST00000525257 MOV10L1Q9BXT6 1211 aaKnown RBP29■■■□□ 2.23
USP47-205ENST00000525257 DCP1AQ9NPI6 582 aaPredicted RBP29■■■□□ 2.23
USP47-205ENST00000525257 MYH8P13535 1937 aa29■■■□□ 2.23
USP47-205ENST00000525257 A0A0G2JMZ2 1700 aa29■■■□□ 2.23
USP47-205ENST00000525257 ZNF236Q9UL36 1845 aa28.99■■■□□ 2.23
USP47-205ENST00000525257 A0A0C4DFX4 3053 aa28.99■■■□□ 2.23
USP47-205ENST00000525257 TCRBV5S4A2TA0A5A2 114 aa28.99■■■□□ 2.23
USP47-205ENST00000525257 MSCO60682 206 aa28.99■■■□□ 2.23
USP47-205ENST00000525257 DPP9Q86TI2 863 aa28.99■■■□□ 2.23
USP47-205ENST00000525257 LPAR1Q92633 364 aa28.99■■■□□ 2.23
USP47-205ENST00000525257 RLFQ13129 1914 aa28.98■■■□□ 2.23
USP47-205ENST00000525257 ADORA2AP29274 412 aa28.98■■■□□ 2.23
USP47-205ENST00000525257 ATN1P54259 1190 aaPredicted RBP28.98■■■□□ 2.23
USP47-205ENST00000525257 KIF1BPQ96EK5 621 aa28.98■■■□□ 2.23
USP47-205ENST00000525257 HOXC10Q9NYD6 342 aa28.98■■■□□ 2.23
USP47-205ENST00000525257 IFIT2P09913 472 aaKnown RBP28.97■■■□□ 2.23
USP47-205ENST00000525257 CYBAP13498 195 aa28.97■■■□□ 2.23
USP47-205ENST00000525257 KIAA1755Q5JYT7 1200 aa28.97■■■□□ 2.23
USP47-205ENST00000525257 TMEM179Q6ZVK1 233 aa28.97■■■□□ 2.23
USP47-205ENST00000525257 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.97■■■□□ 2.23
USP47-205ENST00000525257 DYNLL2Q96FJ2 89 aa28.97■■■□□ 2.23
USP47-205ENST00000525257 SPATC1LQ9H0A9 340 aa28.97■■■□□ 2.23
USP47-205ENST00000525257 ARMT1Q9H993 441 aa28.97■■■□□ 2.23
USP47-205ENST00000525257 DNM1LO00429 736 aa28.96■■■□□ 2.23
USP47-205ENST00000525257 CLEC10AQ8IUN9 316 aa28.96■■■□□ 2.23
USP47-205ENST00000525257 IGHA2P01877 340 aa28.95■■■□□ 2.22
USP47-205ENST00000525257 ERCC3P19447 782 aa28.95■■■□□ 2.22
USP47-205ENST00000525257 MTMR10Q9NXD2 777 aa28.95■■■□□ 2.22
USP47-205ENST00000525257 SWAP70Q9UH65 585 aa28.95■■■□□ 2.22
USP47-205ENST00000525257 BAZ2AQ9UIF9 1905 aaKnown RBP28.94■■■□□ 2.22
USP47-205ENST00000525257 STRNO43815 780 aa28.94■■■□□ 2.22
USP47-205ENST00000525257 PLS1Q14651 629 aa28.94■■■□□ 2.22
USP47-205ENST00000525257 SLFNL1Q499Z3 407 aa28.94■■■□□ 2.22
USP47-205ENST00000525257 GJC2Q5T442 439 aaPredicted RBP28.94■■■□□ 2.22
USP47-205ENST00000525257 OLFML2BQ68BL8 750 aa28.94■■■□□ 2.22
USP47-205ENST00000525257 SHCBP1Q8NEM2 672 aa28.94■■■□□ 2.22
USP47-205ENST00000525257 LBHD1Q9BQE6 289 aaPredicted RBP28.94■■■□□ 2.22
USP47-205ENST00000525257 PRKAB2O43741 272 aa28.93■■■□□ 2.22
USP47-205ENST00000525257 MBD4O95243 580 aa28.93■■■□□ 2.22
USP47-205ENST00000525257 AKR1B1P15121 316 aa28.93■■■□□ 2.22
USP47-205ENST00000525257 ANO1Q5XXA6 986 aa28.93■■■□□ 2.22
USP47-205ENST00000525257 SPICE1Q8N0Z3 855 aa28.93■■■□□ 2.22
USP47-205ENST00000525257 ARHGEF10LQ9HCE6 1279 aa28.93■■■□□ 2.22
USP47-205ENST00000525257 STXBP5LQ9Y2K9 1186 aa28.93■■■□□ 2.22
USP47-205ENST00000525257 LAMA2P24043 3122 aaKnown RBP28.92■■■□□ 2.22
USP47-205ENST00000525257 COBLO75128 1261 aa28.92■■■□□ 2.22
USP47-205ENST00000525257 FLOT1O75955 427 aa28.92■■■□□ 2.22
USP47-205ENST00000525257 DSG3P32926 999 aa28.92■■■□□ 2.22
USP47-205ENST00000525257 RTP1P59025 263 aa28.92■■■□□ 2.22
USP47-205ENST00000525257 ICA1Q05084 483 aa28.92■■■□□ 2.22
USP47-205ENST00000525257 SAMD1Q6SPF0 538 aaPredicted RBP28.92■■■□□ 2.22
USP47-205ENST00000525257 MIER1Q8N108 512 aa28.92■■■□□ 2.22
USP47-205ENST00000525257 MB21D1Q8N884 522 aa28.92■■■□□ 2.22
USP47-205ENST00000525257 ATG4CQ96DT6 458 aa28.92■■■□□ 2.22
USP47-205ENST00000525257 PAG1Q9NWQ8 432 aa28.92■■■□□ 2.22
USP47-205ENST00000525257 HMMRO75330 724 aa28.91■■■□□ 2.22
USP47-205ENST00000525257 ADD2P35612 726 aa28.91■■■□□ 2.22
USP47-205ENST00000525257 NCAPG2Q86XI2 1143 aa28.91■■■□□ 2.22
USP47-205ENST00000525257 SIAH1Q8IUQ4 282 aa28.91■■■□□ 2.22
USP47-205ENST00000525257 SIRT2Q8IXJ6 389 aa28.91■■■□□ 2.22
USP47-205ENST00000525257 RPAP2Q8IXW5 612 aaPredicted RBP28.91■■■□□ 2.22
USP47-205ENST00000525257 BOLA2Q9H3K6 86 aa28.91■■■□□ 2.22
USP47-205ENST00000525257 CUL9Q8IWT3 2517 aa28.9■■■□□ 2.22
USP47-205ENST00000525257 PARP14Q460N5 1801 aa28.9■■■□□ 2.22
USP47-205ENST00000525257 CYP2D7A0A087X1C5 515 aa28.9■■■□□ 2.22
USP47-205ENST00000525257 SMIM22K7EJ46 135 aa28.9■■■□□ 2.22
USP47-205ENST00000525257 MYCNP04198 464 aaPredicted RBP28.9■■■□□ 2.22
USP47-205ENST00000525257 ARRDC4Q8NCT1 418 aa28.9■■■□□ 2.22
USP47-205ENST00000525257 MROH8Q9H579 483 aa28.9■■■□□ 2.22
USP47-205ENST00000525257 SH2D4AQ9H788 454 aa28.9■■■□□ 2.22
USP47-205ENST00000525257 PRKAG2Q9UGJ0 569 aa28.9■■■□□ 2.22
USP47-205ENST00000525257 ATP11BQ9Y2G3 1177 aa28.9■■■□□ 2.22
USP47-205ENST00000525257 TMX2Q9Y320 296 aa28.9■■■□□ 2.22
USP47-205ENST00000525257 LTBP2Q14767 1821 aa28.9■■■□□ 2.22
USP47-205ENST00000525257 KBTBD13C9JR72 458 aa28.89■■■□□ 2.22
USP47-205ENST00000525257 MS4A1P11836 297 aa28.89■■■□□ 2.22
USP47-205ENST00000525257 VCPKMTQ9H867 229 aa28.89■■■□□ 2.22
USP47-205ENST00000525257 ATP8A2Q9NTI2 1148 aa28.89■■■□□ 2.22
USP47-205ENST00000525257 SLC5A4Q9NY91 659 aa28.89■■■□□ 2.22
USP47-205ENST00000525257 ZBED9Q6R2W3 1325 aa28.89■■■□□ 2.21
USP47-205ENST00000525257 SEPT4O43236 478 aa28.88■■■□□ 2.21
USP47-205ENST00000525257 PRAMEF19Q5SWL8 479 aa28.88■■■□□ 2.21
USP47-205ENST00000525257 COG6Q9Y2V7 657 aa28.88■■■□□ 2.21
USP47-205ENST00000525257 RAB11FIP3O75154 756 aa28.87■■■□□ 2.21
USP47-205ENST00000525257 CHGBP05060 677 aa28.87■■■□□ 2.21
USP47-205ENST00000525257 CDK8P49336 464 aa28.87■■■□□ 2.21
USP47-205ENST00000525257 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.87■■■□□ 2.21
USP47-205ENST00000525257 DDX19BQ9UMR2 479 aa28.87■■■□□ 2.21
USP47-205ENST00000525257 COL11A1P12107 1806 aaPredicted RBP28.87■■■□□ 2.21
USP47-205ENST00000525257 MYH7P12883 1935 aa28.86■■■□□ 2.21
USP47-205ENST00000525257 WDR46O15213 610 aaKnown RBP28.86■■■□□ 2.21
USP47-205ENST00000525257 ATP5JP18859 108 aa28.86■■■□□ 2.21
USP47-205ENST00000525257 C12orf60Q5U649 245 aa28.86■■■□□ 2.21
USP47-205ENST00000525257 SLC39A5Q6ZMH5 540 aa28.86■■■□□ 2.21
USP47-205ENST00000525257 AMOTL1Q8IY63 956 aa28.86■■■□□ 2.21
USP47-205ENST00000525257 ABRAQ8N0Z2 381 aa28.86■■■□□ 2.21
USP47-205ENST00000525257 MAML3Q96JK9 1138 aa28.86■■■□□ 2.21
USP47-205ENST00000525257 CCDC17Q96LX7 622 aa28.86■■■□□ 2.21
USP47-205ENST00000525257 ZBTB40Q9NUA8 1239 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms