RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 RABGAP1Q9Y3P9 1069 aa15.06■□□□□ 0
SMCO4-202ENST00000525141 RLFQ13129 1914 aa15.05■□□□□ 0
SMCO4-202ENST00000525141 SPDYE16A6NNV3 312 aaPredicted RBP15.05■□□□□ -0
SMCO4-202ENST00000525141 GPR142Q7Z601 462 aa15.05■□□□□ -0
SMCO4-202ENST00000525141 TRIB2Q92519 343 aa15.05■□□□□ -0
SMCO4-202ENST00000525141 APPBP2Q92624 585 aa15.05■□□□□ -0
SMCO4-202ENST00000525141 TMX2Q9Y320 296 aa15.05■□□□□ -0
SMCO4-202ENST00000525141 TTC41PQ6P2S7 1318 aa15.05■□□□□ -0
SMCO4-202ENST00000525141 XRCC5P13010 732 aaKnown RBP15.04■□□□□ -0
SMCO4-202ENST00000525141 MAPK4P31152 587 aa15.04■□□□□ -0
SMCO4-202ENST00000525141 NUCB1Q02818 461 aa15.04■□□□□ -0
SMCO4-202ENST00000525141 COG2Q14746 738 aa15.04■□□□□ -0
SMCO4-202ENST00000525141 CCL14Q16627 93 aa15.04■□□□□ -0
SMCO4-202ENST00000525141 PLEKHH3Q7Z736 793 aa15.04■□□□□ -0
SMCO4-202ENST00000525141 NKX2-3Q8TAU0 364 aa15.04■□□□□ -0
SMCO4-202ENST00000525141 CCDC17Q96LX7 622 aa15.04■□□□□ -0
SMCO4-202ENST00000525141 DEFB118Q96PH6 123 aa15.04■□□□□ -0
SMCO4-202ENST00000525141 EPB41L4AQ9HCS5 686 aaPredicted RBP15.04■□□□□ -0
SMCO4-202ENST00000525141 PATL2C9JE40 543 aaKnown RBP15.03■□□□□ -0
SMCO4-202ENST00000525141 ERC2O15083 957 aa15.03■□□□□ -0
SMCO4-202ENST00000525141 GPAA1O43292 621 aa15.03■□□□□ -0
SMCO4-202ENST00000525141 SLC34A2O95436 690 aa15.03■□□□□ -0
SMCO4-202ENST00000525141 EEF2P13639 858 aaKnown RBP15.03■□□□□ -0
SMCO4-202ENST00000525141 MNX1P50219 401 aaPredicted RBP15.03■□□□□ -0
SMCO4-202ENST00000525141 MAP3K21Q5TCX8 1036 aa15.03■□□□□ -0
SMCO4-202ENST00000525141 GIMAP6Q6P9H5 292 aa15.03■□□□□ -0
SMCO4-202ENST00000525141 CHD1LQ86WJ1 897 aa15.03■□□□□ -0
SMCO4-202ENST00000525141 STK11IPQ8N1F8 1099 aa15.03■□□□□ -0
SMCO4-202ENST00000525141 GTF3C2Q8WUA4 911 aaPredicted RBP15.03■□□□□ -0
SMCO4-202ENST00000525141 NUDT12Q9BQG2 462 aa15.03■□□□□ -0
SMCO4-202ENST00000525141 HOXC10Q9NYD6 342 aa15.03■□□□□ -0
SMCO4-202ENST00000525141 STAP2Q9UGK3 403 aa15.03■□□□□ -0
SMCO4-202ENST00000525141 CEP290O15078 2479 aa15.03■□□□□ -0
SMCO4-202ENST00000525141 MINDY4BA8MYZ0 360 aa15.02■□□□□ -0
SMCO4-202ENST00000525141 FOXP2O15409 715 aa15.02■□□□□ -0
SMCO4-202ENST00000525141 GLRX3O76003 335 aaKnown RBP15.02■□□□□ -0
SMCO4-202ENST00000525141 IGHA2P01877 340 aa15.02■□□□□ -0
SMCO4-202ENST00000525141 TFRCP02786 760 aaKnown RBP15.02■□□□□ -0
SMCO4-202ENST00000525141 ZFYP08048 801 aaPredicted RBP15.02■□□□□ -0
SMCO4-202ENST00000525141 MX1P20591 662 aa15.02■□□□□ -0
SMCO4-202ENST00000525141 RASA1P20936 1047 aa15.02■□□□□ -0
SMCO4-202ENST00000525141 PTPREP23469 700 aa15.02■□□□□ -0
SMCO4-202ENST00000525141 ZMYM1Q5SVZ6 1142 aa15.02■□□□□ -0
SMCO4-202ENST00000525141 B4GALNT3Q6L9W6 998 aa15.02■□□□□ -0
SMCO4-202ENST00000525141 IFNL3Q8IZI9 196 aa15.02■□□□□ -0
SMCO4-202ENST00000525141 SPICE1Q8N0Z3 855 aa15.02■□□□□ -0
SMCO4-202ENST00000525141 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.02■□□□□ -0
SMCO4-202ENST00000525141 FLRT1Q9NZU1 646 aa15.02■□□□□ -0
SMCO4-202ENST00000525141 RPTORQ8N122 1335 aa15.01□□□□□ -0.01
SMCO4-202ENST00000525141 H0YGN5 161 aa15.01□□□□□ -0.01
SMCO4-202ENST00000525141 HMGCRP04035 888 aa15.01□□□□□ -0.01
SMCO4-202ENST00000525141 NEFLP07196 543 aa15.01□□□□□ -0.01
SMCO4-202ENST00000525141 CACNB2Q08289 660 aaPredicted RBP15.01□□□□□ -0.01
SMCO4-202ENST00000525141 NPLOC4Q8TAT6 608 aa15.01□□□□□ -0.01
SMCO4-202ENST00000525141 MOV10L1Q9BXT6 1211 aaKnown RBP15.01□□□□□ -0.01
SMCO4-202ENST00000525141 LNPKQ9C0E8 428 aa15.01□□□□□ -0.01
SMCO4-202ENST00000525141 VCPKMTQ9H867 229 aa15.01□□□□□ -0.01
SMCO4-202ENST00000525141 KANSL2Q9H9L4 492 aa15.01□□□□□ -0.01
SMCO4-202ENST00000525141 ADAMTS5Q9UNA0 930 aa15.01□□□□□ -0.01
SMCO4-202ENST00000525141 TACC3Q9Y6A5 838 aa15.01□□□□□ -0.01
SMCO4-202ENST00000525141 IGKV6D-41A0A0C4DH26 115 aa15□□□□□ -0.01
SMCO4-202ENST00000525141 PDE1AP54750 535 aa15□□□□□ -0.01
SMCO4-202ENST00000525141 ICA1Q05084 483 aa15□□□□□ -0.01
SMCO4-202ENST00000525141 MAP2K5Q13163 448 aa15□□□□□ -0.01
SMCO4-202ENST00000525141 HMX1Q9NP08 348 aaPredicted RBP15□□□□□ -0.01
SMCO4-202ENST00000525141 ARPP21Q9UBL0 812 aaPredicted RBP15□□□□□ -0.01
SMCO4-202ENST00000525141 MYH8P13535 1937 aa15□□□□□ -0.01
SMCO4-202ENST00000525141 SLC15A5A6NIM6 579 aa14.99□□□□□ -0.01
SMCO4-202ENST00000525141 CCND3P30281 292 aaPredicted RBP14.99□□□□□ -0.01
SMCO4-202ENST00000525141 LHX8Q68G74 356 aa14.99□□□□□ -0.01
SMCO4-202ENST00000525141 CCDC129Q6ZRS4 1044 aa14.99□□□□□ -0.01
SMCO4-202ENST00000525141 DIS3LQ8TF46 1054 aaKnown RBP14.99□□□□□ -0.01
SMCO4-202ENST00000525141 SOCS4Q8WXH5 440 aa14.99□□□□□ -0.01
SMCO4-202ENST00000525141 LPAR1Q92633 364 aa14.99□□□□□ -0.01
SMCO4-202ENST00000525141 DPF3Q92784 378 aa14.99□□□□□ -0.01
SMCO4-202ENST00000525141 ATG4CQ96DT6 458 aa14.99□□□□□ -0.01
SMCO4-202ENST00000525141 DDRGK1Q96HY6 314 aa14.99□□□□□ -0.01
SMCO4-202ENST00000525141 PAWRQ96IZ0 340 aaKnown RBP14.99□□□□□ -0.01
SMCO4-202ENST00000525141 ARHGEF10LQ9HCE6 1279 aa14.99□□□□□ -0.01
SMCO4-202ENST00000525141 INCENPQ9NQS7 918 aa14.99□□□□□ -0.01
SMCO4-202ENST00000525141 FBXO28Q9NVF7 368 aa14.99□□□□□ -0.01
SMCO4-202ENST00000525141 COBLO75128 1261 aa14.98□□□□□ -0.01
SMCO4-202ENST00000525141 PRDM1O75626 825 aa14.98□□□□□ -0.01
SMCO4-202ENST00000525141 FARP2O94887 1054 aaPredicted RBP14.98□□□□□ -0.01
SMCO4-202ENST00000525141 HOXC6P09630 235 aa14.98□□□□□ -0.01
SMCO4-202ENST00000525141 PRKAR2AP13861 404 aaKnown RBP14.98□□□□□ -0.01
SMCO4-202ENST00000525141 GNAT2P19087 354 aa14.98□□□□□ -0.01
SMCO4-202ENST00000525141 RGS2P41220 211 aa14.98□□□□□ -0.01
SMCO4-202ENST00000525141 CCNA1P78396 465 aa14.98□□□□□ -0.01
SMCO4-202ENST00000525141 GRB14Q14449 540 aa14.98□□□□□ -0.01
SMCO4-202ENST00000525141 TMEM132BQ14DG7 1078 aa14.98□□□□□ -0.01
SMCO4-202ENST00000525141 HABP4Q5JVS0 413 aaKnown RBP14.98□□□□□ -0.01
SMCO4-202ENST00000525141 ERICH6BQ5W0A0 696 aa14.98□□□□□ -0.01
SMCO4-202ENST00000525141 CCAR1Q8IX12 1150 aaKnown RBP14.98□□□□□ -0.01
SMCO4-202ENST00000525141 AMOTL1Q8IY63 956 aa14.98□□□□□ -0.01
SMCO4-202ENST00000525141 FSD1Q9BTV5 496 aa14.98□□□□□ -0.01
SMCO4-202ENST00000525141 TANGO6Q9C0B7 1094 aa14.98□□□□□ -0.01
SMCO4-202ENST00000525141 SPATC1LQ9H0A9 340 aa14.98□□□□□ -0.01
SMCO4-202ENST00000525141 OSBPL3Q9H4L5 887 aa14.98□□□□□ -0.01
SMCO4-202ENST00000525141 OGDHLQ9ULD0 1010 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms