RNA–Protein interactions for RNA: ENST00000523916.5

CASP3-206, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,540 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-206ENST00000523916 SMUG1Q53HV7 270 aa11.68□□□□□ -0.54
CASP3-206ENST00000523916 DALRD3Q5D0E6 543 aaKnown RBP11.68□□□□□ -0.54
CASP3-206ENST00000523916 MTHFD1LQ6UB35 978 aa11.68□□□□□ -0.54
CASP3-206ENST00000523916 AMOTL1Q8IY63 956 aa11.68□□□□□ -0.54
CASP3-206ENST00000523916 ERMNQ8TAM6 284 aa11.68□□□□□ -0.54
CASP3-206ENST00000523916 CCDC47Q96A33 483 aaKnown RBP11.68□□□□□ -0.54
CASP3-206ENST00000523916 XAGE2Q96GT9 111 aa11.68□□□□□ -0.54
CASP3-206ENST00000523916 GINM1Q9NU53 330 aa11.68□□□□□ -0.54
CASP3-206ENST00000523916 ADCY9O60503 1353 aa11.68□□□□□ -0.54
CASP3-206ENST00000523916 AK9Q5TCS8 1911 aa11.68□□□□□ -0.54
CASP3-206ENST00000523916 MBD4O95243 580 aa11.67□□□□□ -0.54
CASP3-206ENST00000523916 PTGS1P23219 599 aa11.67□□□□□ -0.54
CASP3-206ENST00000523916 DHX8Q14562 1220 aaKnown RBP11.67□□□□□ -0.54
CASP3-206ENST00000523916 SLC4A8Q2Y0W8 1093 aa11.67□□□□□ -0.54
CASP3-206ENST00000523916 CAPRIN2Q6IMN6 1127 aaKnown RBP11.67□□□□□ -0.54
CASP3-206ENST00000523916 HOOK3Q86VS8 718 aa11.67□□□□□ -0.54
CASP3-206ENST00000523916 GORASP1Q9BQQ3 440 aa11.67□□□□□ -0.54
CASP3-206ENST00000523916 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.67□□□□□ -0.54
CASP3-206ENST00000523916 BCS1LQ9Y276 419 aa11.67□□□□□ -0.54
CASP3-206ENST00000523916 TMEM221A6NGB7 291 aa11.67□□□□□ -0.54
CASP3-206ENST00000523916 HMGB1P1B2RPK0 211 aaPredicted RBP11.67□□□□□ -0.54
CASP3-206ENST00000523916 H3BQF6 201 aa11.67□□□□□ -0.54
CASP3-206ENST00000523916 SEC31AO94979 1220 aaKnown RBP11.67□□□□□ -0.54
CASP3-206ENST00000523916 CHRNA5P30532 468 aa11.67□□□□□ -0.54
CASP3-206ENST00000523916 FOSBP53539 338 aa11.67□□□□□ -0.54
CASP3-206ENST00000523916 KIF6Q6ZMV9 814 aa11.67□□□□□ -0.54
CASP3-206ENST00000523916 SLF2Q8IX21 1173 aa11.67□□□□□ -0.54
CASP3-206ENST00000523916 CNBD1Q8NA66 436 aa11.67□□□□□ -0.54
CASP3-206ENST00000523916 ZNF784Q8NCA9 323 aaPredicted RBP11.67□□□□□ -0.54
CASP3-206ENST00000523916 RUFY1Q96T51 708 aa11.67□□□□□ -0.54
CASP3-206ENST00000523916 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.67□□□□□ -0.54
CASP3-206ENST00000523916 MBIPQ9NS73 344 aa11.67□□□□□ -0.54
CASP3-206ENST00000523916 BTG3Q14201 252 aaPredicted RBP11.66□□□□□ -0.54
CASP3-206ENST00000523916 HLFQ16534 295 aa11.66□□□□□ -0.54
CASP3-206ENST00000523916 VPS53Q5VIR6 699 aa11.66□□□□□ -0.54
CASP3-206ENST00000523916 CCDC150Q8NCX0 1101 aa11.66□□□□□ -0.54
CASP3-206ENST00000523916 ANKK1Q8NFD2 765 aa11.66□□□□□ -0.54
CASP3-206ENST00000523916 JAKMIP2Q96AA8 810 aa11.66□□□□□ -0.54
CASP3-206ENST00000523916 CLIP3Q96DZ5 547 aa11.66□□□□□ -0.54
CASP3-206ENST00000523916 ACBD3Q9H3P7 528 aa11.66□□□□□ -0.54
CASP3-206ENST00000523916 L2HGDHQ9H9P8 463 aa11.66□□□□□ -0.54
CASP3-206ENST00000523916 HOXC10Q9NYD6 342 aa11.66□□□□□ -0.54
CASP3-206ENST00000523916 TFIP11Q9UBB9 837 aaKnown RBP11.66□□□□□ -0.54
CASP3-206ENST00000523916 SPO11Q9Y5K1 396 aa11.66□□□□□ -0.54
CASP3-206ENST00000523916 H0YIN7 160 aa11.66□□□□□ -0.54
CASP3-206ENST00000523916 ABL1P00519 1130 aa11.66□□□□□ -0.54
CASP3-206ENST00000523916 TGFB3P10600 412 aa11.66□□□□□ -0.54
CASP3-206ENST00000523916 MYL6BP14649 208 aa11.66□□□□□ -0.54
CASP3-206ENST00000523916 ENPP1P22413 925 aa11.66□□□□□ -0.54
CASP3-206ENST00000523916 PDE4BQ07343 736 aa11.66□□□□□ -0.54
CASP3-206ENST00000523916 C2CD5Q86YS7 1000 aa11.66□□□□□ -0.54
CASP3-206ENST00000523916 ZFAND2BQ8WV99 257 aa11.66□□□□□ -0.54
CASP3-206ENST00000523916 DTNBP1Q96EV8 351 aa11.66□□□□□ -0.54
CASP3-206ENST00000523916 ORC3Q9UBD5 711 aaPredicted RBP11.66□□□□□ -0.54
CASP3-206ENST00000523916 DDX20Q9UHI6 824 aaKnown RBP11.66□□□□□ -0.54
CASP3-206ENST00000523916 NIP7Q9Y221 180 aaKnown RBP eCLIP11.66□□□□□ -0.54
CASP3-206ENST00000523916 SBF1O95248 1867 aa11.66□□□□□ -0.54
CASP3-206ENST00000523916 RIC1Q4ADV7 1423 aa11.66□□□□□ -0.54
CASP3-206ENST00000523916 INPP5BP32019 993 aa11.65□□□□□ -0.54
CASP3-206ENST00000523916 TBC1D10BQ4KMP7 808 aaPredicted RBP11.65□□□□□ -0.54
CASP3-206ENST00000523916 CEP57L1Q8IYX8 460 aa11.65□□□□□ -0.54
CASP3-206ENST00000523916 DDX21Q9NR30 783 aaKnown RBP eCLIP11.65□□□□□ -0.54
CASP3-206ENST00000523916 DNAI1Q9UI46 699 aa11.65□□□□□ -0.54
CASP3-206ENST00000523916 KLRG2A4D1S0 409 aaPredicted RBP11.65□□□□□ -0.54
CASP3-206ENST00000523916 EZRP15311 586 aaKnown RBP11.65□□□□□ -0.54
CASP3-206ENST00000523916 FERP16591 822 aa11.65□□□□□ -0.54
CASP3-206ENST00000523916 EIF2S2P20042 333 aaKnown RBP11.65□□□□□ -0.54
CASP3-206ENST00000523916 CLCN2P51788 898 aa11.65□□□□□ -0.54
CASP3-206ENST00000523916 MIS18BP1Q6P0N0 1132 aa11.65□□□□□ -0.54
CASP3-206ENST00000523916 GIGYF2Q6Y7W6 1299 aaKnown RBP11.65□□□□□ -0.54
CASP3-206ENST00000523916 ARHGAP27Q6ZUM4 889 aa11.65□□□□□ -0.54
CASP3-206ENST00000523916 RNF168Q8IYW5 571 aaPredicted RBP11.65□□□□□ -0.54
CASP3-206ENST00000523916 RSRC1Q96IZ7 334 aaKnown RBP11.65□□□□□ -0.54
CASP3-206ENST00000523916 SLC39A2Q9NP94 309 aa11.65□□□□□ -0.54
CASP3-206ENST00000523916 JADE2Q9NQC1 790 aa11.65□□□□□ -0.54
CASP3-206ENST00000523916 EXOC1Q9NV70 894 aa11.65□□□□□ -0.54
CASP3-206ENST00000523916 TRMT1Q9NXH9 659 aaKnown RBP11.65□□□□□ -0.54
CASP3-206ENST00000523916 VPS18Q9P253 973 aa11.65□□□□□ -0.54
CASP3-206ENST00000523916 CEP104O60308 925 aa11.64□□□□□ -0.55
CASP3-206ENST00000523916 RAB11FIP3O75154 756 aa11.64□□□□□ -0.55
CASP3-206ENST00000523916 PTPN14Q15678 1187 aa11.64□□□□□ -0.55
CASP3-206ENST00000523916 GALNT17Q6IS24 598 aa11.64□□□□□ -0.55
CASP3-206ENST00000523916 CC2D1AQ6P1N0 951 aaPredicted RBP11.64□□□□□ -0.55
CASP3-206ENST00000523916 TPTE2Q6XPS3 522 aa11.64□□□□□ -0.55
CASP3-206ENST00000523916 SEPT14Q6ZU15 432 aa11.64□□□□□ -0.55
CASP3-206ENST00000523916 DZIP1Q86YF9 867 aaKnown RBP11.64□□□□□ -0.55
CASP3-206ENST00000523916 PEX5LQ8IYB4 626 aa11.64□□□□□ -0.55
CASP3-206ENST00000523916 SYCP3Q8IZU3 236 aa11.64□□□□□ -0.55
CASP3-206ENST00000523916 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.64□□□□□ -0.55
CASP3-206ENST00000523916 PAPOLBQ9NRJ5 636 aaKnown RBP11.64□□□□□ -0.55
CASP3-206ENST00000523916 WWC3Q9ULE0 1092 aa11.64□□□□□ -0.55
CASP3-206ENST00000523916 DIS3Q9Y2L1 958 aaKnown RBP11.64□□□□□ -0.55
CASP3-206ENST00000523916 FAM169AQ9Y6X4 670 aa11.64□□□□□ -0.55
CASP3-206ENST00000523916 ERICH2A1L162 156 aa11.64□□□□□ -0.55
CASP3-206ENST00000523916 FNTAP49354 379 aa11.64□□□□□ -0.55
CASP3-206ENST00000523916 KRT24Q2M2I5 525 aa11.64□□□□□ -0.55
CASP3-206ENST00000523916 PROSER3Q2NL68 480 aa11.64□□□□□ -0.55
CASP3-206ENST00000523916 STYK1Q6J9G0 422 aa11.64□□□□□ -0.55
CASP3-206ENST00000523916 ZNF34Q8IZ26 560 aa11.64□□□□□ -0.55
CASP3-206ENST00000523916 TTLL6Q8N841 843 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms