RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 ADCYAP1R1P41586 468 aa9.67□□□□□ -0.86
NSMCE2-213ENST00000523824 COG2Q14746 738 aa9.67□□□□□ -0.86
NSMCE2-213ENST00000523824 MAGEB6Q8N7X4 407 aa9.67□□□□□ -0.86
NSMCE2-213ENST00000523824 FERMT2Q96AC1 680 aa9.67□□□□□ -0.86
NSMCE2-213ENST00000523824 ZNF512BQ96KM6 892 aaPredicted RBP9.67□□□□□ -0.86
NSMCE2-213ENST00000523824 MOV10L1Q9BXT6 1211 aaKnown RBP9.67□□□□□ -0.86
NSMCE2-213ENST00000523824 PRDM6Q9NQX0 595 aa9.67□□□□□ -0.86
NSMCE2-213ENST00000523824 SURF6O75683 361 aaKnown RBP9.66□□□□□ -0.86
NSMCE2-213ENST00000523824 IGHA2P01877 340 aa9.66□□□□□ -0.86
NSMCE2-213ENST00000523824 POLR3DP05423 398 aaPredicted RBP9.66□□□□□ -0.86
NSMCE2-213ENST00000523824 ERCC3P19447 782 aa9.66□□□□□ -0.86
NSMCE2-213ENST00000523824 PLCD1P51178 756 aa9.66□□□□□ -0.86
NSMCE2-213ENST00000523824 MAP3K12Q12852 859 aa9.66□□□□□ -0.86
NSMCE2-213ENST00000523824 PLS1Q14651 629 aa9.66□□□□□ -0.86
NSMCE2-213ENST00000523824 SNX17Q15036 470 aa9.66□□□□□ -0.86
NSMCE2-213ENST00000523824 PRAMEF19Q5SWL8 479 aa9.66□□□□□ -0.86
NSMCE2-213ENST00000523824 SH3RF1Q7Z6J0 888 aa9.66□□□□□ -0.86
NSMCE2-213ENST00000523824 FRAT1Q92837 279 aaPredicted RBP9.66□□□□□ -0.86
NSMCE2-213ENST00000523824 TANGO6Q9C0B7 1094 aa9.66□□□□□ -0.86
NSMCE2-213ENST00000523824 SPATC1LQ9H0A9 340 aa9.66□□□□□ -0.86
NSMCE2-213ENST00000523824 CCDC8Q9H0W5 538 aaPredicted RBP9.66□□□□□ -0.86
NSMCE2-213ENST00000523824 TTYH1Q9H313 450 aaPredicted RBP9.66□□□□□ -0.86
NSMCE2-213ENST00000523824 PDLIM7Q9NR12 457 aa9.66□□□□□ -0.86
NSMCE2-213ENST00000523824 TRIM43BA6NCK2 446 aa9.65□□□□□ -0.86
NSMCE2-213ENST00000523824 COBLO75128 1261 aa9.65□□□□□ -0.86
NSMCE2-213ENST00000523824 BCAR3O75815 825 aa9.65□□□□□ -0.86
NSMCE2-213ENST00000523824 TRIM27P14373 513 aa9.65□□□□□ -0.86
NSMCE2-213ENST00000523824 SHMT1P34896 483 aa9.65□□□□□ -0.86
NSMCE2-213ENST00000523824 ATP8B2P98198 1209 aa9.65□□□□□ -0.86
NSMCE2-213ENST00000523824 TLE2Q04725 743 aa9.65□□□□□ -0.86
NSMCE2-213ENST00000523824 SEPT2Q15019 361 aa9.65□□□□□ -0.86
NSMCE2-213ENST00000523824 LRRC41Q15345 812 aa9.65□□□□□ -0.86
NSMCE2-213ENST00000523824 C1orf53Q5VUE5 145 aa9.65□□□□□ -0.86
NSMCE2-213ENST00000523824 NCAPG2Q86XI2 1143 aa9.65□□□□□ -0.86
NSMCE2-213ENST00000523824 MB21D1Q8N884 522 aa9.65□□□□□ -0.86
NSMCE2-213ENST00000523824 SHCBP1Q8NEM2 672 aa9.65□□□□□ -0.86
NSMCE2-213ENST00000523824 CLUAP1Q96AJ1 413 aa9.65□□□□□ -0.86
NSMCE2-213ENST00000523824 TRIM43Q96BQ3 446 aaPredicted RBP9.65□□□□□ -0.86
NSMCE2-213ENST00000523824 RNPC3Q96LT9 517 aaKnown RBP9.65□□□□□ -0.86
NSMCE2-213ENST00000523824 MROH8Q9H579 483 aa9.65□□□□□ -0.86
NSMCE2-213ENST00000523824 DBNLQ9UJU6 430 aaKnown RBP9.65□□□□□ -0.86
NSMCE2-213ENST00000523824 TNNQ9UQP3 1299 aa9.65□□□□□ -0.86
NSMCE2-213ENST00000523824 TACC3Q9Y6A5 838 aa9.65□□□□□ -0.86
NSMCE2-213ENST00000523824 MAST2Q6P0Q8 1798 aa9.65□□□□□ -0.87
NSMCE2-213ENST00000523824 CLTBP09497 229 aa9.64□□□□□ -0.87
NSMCE2-213ENST00000523824 RARBP10826 455 aa9.64□□□□□ -0.87
NSMCE2-213ENST00000523824 FCER1AP12319 257 aa9.64□□□□□ -0.87
NSMCE2-213ENST00000523824 RAG1P15918 1043 aa9.64□□□□□ -0.87
NSMCE2-213ENST00000523824 GUCY1A2P33402 732 aa9.64□□□□□ -0.87
NSMCE2-213ENST00000523824 RNF180Q86T96 592 aa9.64□□□□□ -0.87
NSMCE2-213ENST00000523824 ABRAQ8N0Z2 381 aa9.64□□□□□ -0.87
NSMCE2-213ENST00000523824 SSH3Q8TE77 659 aa9.64□□□□□ -0.87
NSMCE2-213ENST00000523824 XPNPEP3Q9NQH7 507 aa9.64□□□□□ -0.87
NSMCE2-213ENST00000523824 FRMPD3Q5JV73 1810 aa9.63□□□□□ -0.87
NSMCE2-213ENST00000523824 TMEM265A0A087WTH1 108 aa9.63□□□□□ -0.87
NSMCE2-213ENST00000523824 MAGEB6P1A0A0J9YX57 407 aa9.63□□□□□ -0.87
NSMCE2-213ENST00000523824 A0A1W2PRG0 241 aa9.63□□□□□ -0.87
NSMCE2-213ENST00000523824 FLOT1O75955 427 aa9.63□□□□□ -0.87
NSMCE2-213ENST00000523824 FAM47AQ5JRC9 791 aa9.63□□□□□ -0.87
NSMCE2-213ENST00000523824 TMED8Q6PL24 325 aaPredicted RBP9.63□□□□□ -0.87
NSMCE2-213ENST00000523824 EAF2Q96CJ1 260 aaPredicted RBP9.63□□□□□ -0.87
NSMCE2-213ENST00000523824 MAML3Q96JK9 1138 aa9.63□□□□□ -0.87
NSMCE2-213ENST00000523824 CRNKL1Q9BZJ0 848 aaKnown RBP9.63□□□□□ -0.87
NSMCE2-213ENST00000523824 ANTXR1Q9H6X2 564 aa9.63□□□□□ -0.87
NSMCE2-213ENST00000523824 TMEM39AQ9NV64 488 aa9.63□□□□□ -0.87
NSMCE2-213ENST00000523824 MCM9Q9NXL9 1143 aa9.63□□□□□ -0.87
NSMCE2-213ENST00000523824 TLR7Q9NYK1 1049 aaKnown RBP9.63□□□□□ -0.87
NSMCE2-213ENST00000523824 PHF24Q9UPV7 400 aa9.63□□□□□ -0.87
NSMCE2-213ENST00000523824 TTC28Q96AY4 2481 aa9.63□□□□□ -0.87
NSMCE2-213ENST00000523824 EYSQ5T1H1 3165 aa9.63□□□□□ -0.87
NSMCE2-213ENST00000523824 CDK5RAP2Q96SN8 1893 aa9.62□□□□□ -0.87
NSMCE2-213ENST00000523824 LTBP2Q14767 1821 aa9.62□□□□□ -0.87
NSMCE2-213ENST00000523824 FOCADQ5VW36 1801 aa9.62□□□□□ -0.87
NSMCE2-213ENST00000523824 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.62□□□□□ -0.87
NSMCE2-213ENST00000523824 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.62□□□□□ -0.87
NSMCE2-213ENST00000523824 KIAA0355O15063 1070 aa9.62□□□□□ -0.87
NSMCE2-213ENST00000523824 PQBP1O60828 265 aaKnown RBP9.62□□□□□ -0.87
NSMCE2-213ENST00000523824 SLC25A27O95847 323 aa9.62□□□□□ -0.87
NSMCE2-213ENST00000523824 PGK1P00558 417 aa9.62□□□□□ -0.87
NSMCE2-213ENST00000523824 ITGB8P26012 769 aa9.62□□□□□ -0.87
NSMCE2-213ENST00000523824 EPHB4P54760 987 aa9.62□□□□□ -0.87
NSMCE2-213ENST00000523824 FPGSQ05932 587 aa9.62□□□□□ -0.87
NSMCE2-213ENST00000523824 GABPAQ06546 454 aa9.62□□□□□ -0.87
NSMCE2-213ENST00000523824 GRIN2CQ14957 1233 aa9.62□□□□□ -0.87
NSMCE2-213ENST00000523824 TJAP1Q5JTD0 557 aa9.62□□□□□ -0.87
NSMCE2-213ENST00000523824 TMEM179Q6ZVK1 233 aa9.62□□□□□ -0.87
NSMCE2-213ENST00000523824 TMEM57Q8N5G2 664 aa9.62□□□□□ -0.87
NSMCE2-213ENST00000523824 ATG4CQ96DT6 458 aa9.62□□□□□ -0.87
NSMCE2-213ENST00000523824 MMP19Q99542 508 aa9.62□□□□□ -0.87
NSMCE2-213ENST00000523824 RIOK1Q9BRS2 568 aaKnown RBP9.62□□□□□ -0.87
NSMCE2-213ENST00000523824 SH2D4AQ9H788 454 aa9.62□□□□□ -0.87
NSMCE2-213ENST00000523824 C1orf115Q9H7X2 142 aa9.62□□□□□ -0.87
NSMCE2-213ENST00000523824 ARHGEF10LQ9HCE6 1279 aa9.62□□□□□ -0.87
NSMCE2-213ENST00000523824 NRBP1Q9UHY1 535 aa9.62□□□□□ -0.87
NSMCE2-213ENST00000523824 NOP58Q9Y2X3 529 aaKnown RBP9.62□□□□□ -0.87
NSMCE2-213ENST00000523824 CDH23Q9H251 3354 aa9.61□□□□□ -0.87
NSMCE2-213ENST00000523824 MYH1P12882 1939 aa9.61□□□□□ -0.87
NSMCE2-213ENST00000523824 DCDC2CA8MYV0 355 aa9.61□□□□□ -0.87
NSMCE2-213ENST00000523824 KCTD2Q14681 263 aa9.61□□□□□ -0.87
NSMCE2-213ENST00000523824 KIAA1755Q5JYT7 1200 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms