RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 LETMD1Q6P1Q0 360 aa7.41□□□□□ -1.22
PCM1-219ENST00000523540 MCF2L2Q86YR7 1114 aa7.41□□□□□ -1.22
PCM1-219ENST00000523540 RIN3Q8TB24 985 aa7.41□□□□□ -1.22
PCM1-219ENST00000523540 XAGE3Q8WTP9 111 aa7.41□□□□□ -1.22
PCM1-219ENST00000523540 PPP1R13LQ8WUF5 828 aa7.41□□□□□ -1.22
PCM1-219ENST00000523540 SHDQ96IW2 340 aa7.41□□□□□ -1.22
PCM1-219ENST00000523540 STRIP2Q9ULQ0 834 aa7.41□□□□□ -1.22
PCM1-219ENST00000523540 TMEM265A0A087WTH1 108 aa7.4□□□□□ -1.22
PCM1-219ENST00000523540 NME1P15531 152 aaKnown RBP7.4□□□□□ -1.22
PCM1-219ENST00000523540 EIF6P56537 245 aaKnown RBP7.4□□□□□ -1.22
PCM1-219ENST00000523540 PLCL1Q15111 1095 aa7.4□□□□□ -1.22
PCM1-219ENST00000523540 FBXW10Q5XX13 1052 aa7.4□□□□□ -1.22
PCM1-219ENST00000523540 NLRC3Q7RTR2 1065 aa7.4□□□□□ -1.22
PCM1-219ENST00000523540 ATG4DQ86TL0 474 aaPredicted RBP7.4□□□□□ -1.22
PCM1-219ENST00000523540 LSRQ86X29 649 aaPredicted RBP7.4□□□□□ -1.22
PCM1-219ENST00000523540 DNAJB8Q8NHS0 232 aa7.4□□□□□ -1.22
PCM1-219ENST00000523540 HEXIM2Q96MH2 286 aaKnown RBP7.4□□□□□ -1.22
PCM1-219ENST00000523540 MIPEPQ99797 713 aa7.4□□□□□ -1.22
PCM1-219ENST00000523540 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.4□□□□□ -1.224e-6■□□□□ 8
PCM1-219ENST00000523540 VAV3Q9UKW4 847 aa7.4□□□□□ -1.22
PCM1-219ENST00000523540 TNFRSF10CO14798 259 aa7.39□□□□□ -1.23
PCM1-219ENST00000523540 RGS13O14921 159 aa7.39□□□□□ -1.23
PCM1-219ENST00000523540 FARP2O94887 1054 aaPredicted RBP7.39□□□□□ -1.23
PCM1-219ENST00000523540 PRKCQQ04759 706 aa7.39□□□□□ -1.23
PCM1-219ENST00000523540 TAB3Q8N5C8 712 aaPredicted RBP7.39□□□□□ -1.23
PCM1-219ENST00000523540 PIWIL2Q8TC59 973 aaKnown RBP7.39□□□□□ -1.23
PCM1-219ENST00000523540 CCDC74BQ96LY2 380 aa7.39□□□□□ -1.23
PCM1-219ENST00000523540 CEP131Q9UPN4 1083 aa7.39□□□□□ -1.23
PCM1-219ENST00000523540 CNTNAP4Q9C0A0 1308 aa7.38□□□□□ -1.23
PCM1-219ENST00000523540 ACRP10323 421 aa7.38□□□□□ -1.23
PCM1-219ENST00000523540 FUT4P22083 530 aa7.38□□□□□ -1.23
PCM1-219ENST00000523540 SFRP5Q5T4F7 317 aa7.38□□□□□ -1.23
PCM1-219ENST00000523540 INTS3Q68E01 1043 aaKnown RBP7.38□□□□□ -1.23
PCM1-219ENST00000523540 RUFY4Q6ZNE9 571 aa7.38□□□□□ -1.23
PCM1-219ENST00000523540 CDH24Q86UP0 819 aa7.38□□□□□ -1.23
PCM1-219ENST00000523540 PHACTR4Q8IZ21 702 aa7.38□□□□□ -1.23
PCM1-219ENST00000523540 BAHD1Q8TBE0 780 aaPredicted RBP7.38□□□□□ -1.23
PCM1-219ENST00000523540 CPLX3Q8WVH0 158 aa7.38□□□□□ -1.23
PCM1-219ENST00000523540 CRBNQ96SW2 442 aa7.38□□□□□ -1.23
PCM1-219ENST00000523540 KIF2CQ99661 725 aa7.38□□□□□ -1.23
PCM1-219ENST00000523540 TM9SF2Q99805 663 aa7.38□□□□□ -1.23
PCM1-219ENST00000523540 GNAT3A8MTJ3 354 aa7.37□□□□□ -1.23
PCM1-219ENST00000523540 UBOX5O94941 541 aa7.37□□□□□ -1.23
PCM1-219ENST00000523540 RAG1P15918 1043 aa7.37□□□□□ -1.23
PCM1-219ENST00000523540 POLR2BP30876 1174 aaKnown RBP7.37□□□□□ -1.23
PCM1-219ENST00000523540 THAP5Q7Z6K1 395 aa7.37□□□□□ -1.23
PCM1-219ENST00000523540 FAM169BQ8N8A8 192 aa7.37□□□□□ -1.23
PCM1-219ENST00000523540 OR6P1Q8NGX9 317 aa7.37□□□□□ -1.23
PCM1-219ENST00000523540 RNF141Q8WVD5 230 aa7.37□□□□□ -1.23
PCM1-219ENST00000523540 SLC9A7Q96T83 725 aa7.37□□□□□ -1.23
PCM1-219ENST00000523540 KRTAP4-5Q9BYR2 181 aa7.37□□□□□ -1.23
PCM1-219ENST00000523540 RBAK-RBAKDNI3L0D1 243 aa7.36□□□□□ -1.23
PCM1-219ENST00000523540 SSBP05455 408 aaKnown RBP eCLIP7.36□□□□□ -1.23
PCM1-219ENST00000523540 ARHGAP27Q6ZUM4 889 aa7.36□□□□□ -1.23
PCM1-219ENST00000523540 SPACA3Q8IXA5 215 aa7.36□□□□□ -1.23
PCM1-219ENST00000523540 MFSD4AQ8N468 514 aa7.36□□□□□ -1.23
PCM1-219ENST00000523540 FAM168AQ92567 244 aa7.36□□□□□ -1.23
PCM1-219ENST00000523540 ASPNQ9BXN1 380 aa7.36□□□□□ -1.23
PCM1-219ENST00000523540 MRVI1Q9Y6F6 885 aa7.36□□□□□ -1.23
PCM1-219ENST00000523540 U3KQE9 123 aa7.36□□□□□ -1.23
PCM1-219ENST00000523540 RNASE1P07998 156 aaKnown RBP7.35□□□□□ -1.23
PCM1-219ENST00000523540 GUCY2CP25092 1073 aa7.35□□□□□ -1.23
PCM1-219ENST00000523540 ETFBP38117 255 aa7.35□□□□□ -1.23
PCM1-219ENST00000523540 BNIP3Q12983 259 aa7.35□□□□□ -1.23
PCM1-219ENST00000523540 CILP2Q8IUL8 1156 aa7.35□□□□□ -1.23
PCM1-219ENST00000523540 ASB11Q8WXH4 323 aa7.35□□□□□ -1.23
PCM1-219ENST00000523540 ANAPC16Q96DE5 110 aa7.35□□□□□ -1.23
PCM1-219ENST00000523540 VWCEQ96DN2 955 aa7.35□□□□□ -1.23
PCM1-219ENST00000523540 HRASLS5Q96KN8 279 aa7.35□□□□□ -1.23
PCM1-219ENST00000523540 TANGO6Q9C0B7 1094 aa7.35□□□□□ -1.23
PCM1-219ENST00000523540 MBNL3Q9NUK0 354 aaKnown RBP7.35□□□□□ -1.23
PCM1-219ENST00000523540 TPX2Q9ULW0 747 aaKnown RBP7.35□□□□□ -1.23
PCM1-219ENST00000523540 PLAGL2Q9UPG8 496 aa7.35□□□□□ -1.23
PCM1-219ENST00000523540 CAPN6Q9Y6Q1 641 aa7.35□□□□□ -1.23
PCM1-219ENST00000523540 CD8BP10966 210 aa7.34□□□□□ -1.23
PCM1-219ENST00000523540 GBP1P32455 592 aa7.34□□□□□ -1.23
PCM1-219ENST00000523540 RANGAP1P46060 587 aaPredicted RBP7.34□□□□□ -1.23
PCM1-219ENST00000523540 CASP7P55210 303 aa7.34□□□□□ -1.23
PCM1-219ENST00000523540 ZYXQ15942 572 aaKnown RBP7.34□□□□□ -1.23
PCM1-219ENST00000523540 NKPD1Q17RQ9 610 aa7.34□□□□□ -1.23
PCM1-219ENST00000523540 KRTAP19-4Q3LI73 84 aa7.34□□□□□ -1.23
PCM1-219ENST00000523540 C19orf47Q8N9M1 422 aaKnown RBP7.34□□□□□ -1.23
PCM1-219ENST00000523540 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.34□□□□□ -1.23
PCM1-219ENST00000523540 ZNF408Q9H9D4 720 aa7.34□□□□□ -1.23
PCM1-219ENST00000523540 RC3H2Q9HBD1 1191 aaKnown RBP7.34□□□□□ -1.23
PCM1-219ENST00000523540 ADAMTS6Q9UKP5 1117 aa7.34□□□□□ -1.23
PCM1-219ENST00000523540 PITPNM2Q9BZ72 1349 aa7.33□□□□□ -1.24
PCM1-219ENST00000523540 A0A1W2PQH9 124 aa7.33□□□□□ -1.24
PCM1-219ENST00000523540 RNF4P78317 190 aa7.33□□□□□ -1.24
PCM1-219ENST00000523540 MESP2Q0VG99 397 aa7.33□□□□□ -1.24
PCM1-219ENST00000523540 UNC5AQ6ZN44 842 aa7.33□□□□□ -1.24
PCM1-219ENST00000523540 TMEM192Q8IY95 271 aa7.33□□□□□ -1.24
PCM1-219ENST00000523540 PLD6Q8N2A8 252 aaKnown RBP7.33□□□□□ -1.24
PCM1-219ENST00000523540 SREK1Q8WXA9 508 aaKnown RBP7.33□□□□□ -1.24
PCM1-219ENST00000523540 KREMEN1Q96MU8 473 aa7.33□□□□□ -1.24
PCM1-219ENST00000523540 PRR33A8MZF0 331 aa7.32□□□□□ -1.24
PCM1-219ENST00000523540 ATP2B1P20020 1258 aa7.32□□□□□ -1.24
PCM1-219ENST00000523540 TTC6Q86TZ1 520 aa7.32□□□□□ -1.24
PCM1-219ENST00000523540 FAM181AQ8N9Y4 354 aa7.32□□□□□ -1.24
PCM1-219ENST00000523540 BHLHE22Q8NFJ8 381 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms