RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 STK38Q15208 465 aa24.01■■□□□ 1.43
SQLE-206ENST00000523430 ZSCAN29Q8IWY8 852 aaPredicted RBP24.01■■□□□ 1.43
SQLE-206ENST00000523430 MTMR4Q9NYA4 1195 aa24.01■■□□□ 1.43
SQLE-206ENST00000523430 GOLGA8HP0CJ92 632 aa24■■□□□ 1.43
SQLE-206ENST00000523430 EIF6P56537 245 aaKnown RBP24■■□□□ 1.43
SQLE-206ENST00000523430 PHF20Q9BVI0 1012 aa24■■□□□ 1.43
SQLE-206ENST00000523430 FOXP1Q9H334 677 aaPredicted RBP24■■□□□ 1.43
SQLE-206ENST00000523430 PALM3A6NDB9 673 aaPredicted RBP24■■□□□ 1.43
SQLE-206ENST00000523430 SCG2P13521 617 aa24■■□□□ 1.43
SQLE-206ENST00000523430 VEGFAP15692 232 aaPredicted RBP24■■□□□ 1.43
SQLE-206ENST00000523430 XBP1P17861 261 aa24■■□□□ 1.43
SQLE-206ENST00000523430 CXCL9Q07325 125 aa24■■□□□ 1.43
SQLE-206ENST00000523430 LRRC47Q8N1G4 583 aaKnown RBP24■■□□□ 1.43
SQLE-206ENST00000523430 DACT1Q9NYF0 836 aa24■■□□□ 1.43
SQLE-206ENST00000523430 ATRNL1Q5VV63 1379 aa23.99■■□□□ 1.43
SQLE-206ENST00000523430 NR1I2O75469 434 aa23.99■■□□□ 1.43
SQLE-206ENST00000523430 PFKFB3Q16875 520 aaPredicted RBP23.99■■□□□ 1.43
SQLE-206ENST00000523430 KCNG4Q8TDN1 519 aa23.99■■□□□ 1.43
SQLE-206ENST00000523430 PANK2Q9BZ23 570 aa23.99■■□□□ 1.43
SQLE-206ENST00000523430 GOLPH3LQ9H4A5 285 aa23.99■■□□□ 1.43
SQLE-206ENST00000523430 PI4KBQ9UBF8 816 aa23.99■■□□□ 1.43
SQLE-206ENST00000523430 HDAC9Q9UKV0 1011 aa23.99■■□□□ 1.43
SQLE-206ENST00000523430 PCDHA7Q9UN72 937 aa23.99■■□□□ 1.43
SQLE-206ENST00000523430 COL2A1P02458 1487 aaPredicted RBP23.99■■□□□ 1.43
SQLE-206ENST00000523430 CLRN2A0PK11 232 aa23.98■■□□□ 1.43
SQLE-206ENST00000523430 MPHOSPH10O00566 681 aaKnown RBP23.98■■□□□ 1.43
SQLE-206ENST00000523430 CYTH3O43739 400 aa23.98■■□□□ 1.43
SQLE-206ENST00000523430 SF3A1Q15459 793 aaKnown RBP23.98■■□□□ 1.43
SQLE-206ENST00000523430 SHROOM1Q2M3G4 852 aaPredicted RBP23.98■■□□□ 1.43
SQLE-206ENST00000523430 NLGN2Q8NFZ4 835 aa23.98■■□□□ 1.43
SQLE-206ENST00000523430 SPTLC2O15270 562 aa23.98■■□□□ 1.43
SQLE-206ENST00000523430 ENTPD3O75355 529 aa23.98■■□□□ 1.43
SQLE-206ENST00000523430 GNAQP50148 359 aa23.98■■□□□ 1.43
SQLE-206ENST00000523430 USP17L2Q6R6M4 530 aa23.98■■□□□ 1.43
SQLE-206ENST00000523430 OGFOD1Q8N543 542 aa23.98■■□□□ 1.43
SQLE-206ENST00000523430 CPVLQ9H3G5 476 aa23.98■■□□□ 1.43
SQLE-206ENST00000523430 DLGAP5Q15398 846 aa23.97■■□□□ 1.43
SQLE-206ENST00000523430 NPY5RQ15761 445 aa23.97■■□□□ 1.43
SQLE-206ENST00000523430 CCAR1Q8IX12 1150 aaKnown RBP23.97■■□□□ 1.43
SQLE-206ENST00000523430 RBSNQ9H1K0 784 aa23.97■■□□□ 1.43
SQLE-206ENST00000523430 PARP1P09874 1014 aaKnown RBP23.96■■□□□ 1.43
SQLE-206ENST00000523430 KRT2P35908 639 aa23.96■■□□□ 1.43
SQLE-206ENST00000523430 TOB1P50616 345 aaPredicted RBP23.96■■□□□ 1.43
SQLE-206ENST00000523430 RASSF7Q02833 373 aa23.96■■□□□ 1.43
SQLE-206ENST00000523430 AGBL3Q8NEM8 1001 aa23.96■■□□□ 1.43
SQLE-206ENST00000523430 GPKOWQ92917 476 aaPredicted RBP eCLIP23.96■■□□□ 1.434e-7■□□□□ 10.4
SQLE-206ENST00000523430 NUP62CLQ9H1M0 184 aa23.96■■□□□ 1.43
SQLE-206ENST00000523430 FAM205CA6NFA0 338 aa23.96■■□□□ 1.43
SQLE-206ENST00000523430 USP17L5A8MUK1 530 aa23.96■■□□□ 1.43
SQLE-206ENST00000523430 TCP10L2B9ZVM9 353 aa23.96■■□□□ 1.43
SQLE-206ENST00000523430 TTLL1O95922 423 aa23.96■■□□□ 1.43
SQLE-206ENST00000523430 PTPAQ15257 358 aa23.96■■□□□ 1.43
SQLE-206ENST00000523430 JDP2Q8WYK2 163 aa23.96■■□□□ 1.43
SQLE-206ENST00000523430 DDX19AQ9NUU7 478 aaKnown RBP23.96■■□□□ 1.43
SQLE-206ENST00000523430 ZNF70Q9UC06 446 aaPredicted RBP23.96■■□□□ 1.43
SQLE-206ENST00000523430 KLRF2D3W0D1 207 aa23.95■■□□□ 1.42
SQLE-206ENST00000523430 PDHBP11177 359 aa23.95■■□□□ 1.42
SQLE-206ENST00000523430 SLC39A14Q15043 492 aa23.95■■□□□ 1.42
SQLE-206ENST00000523430 CAMK4Q16566 473 aa23.95■■□□□ 1.42
SQLE-206ENST00000523430 CIAPIN1Q6FI81 312 aa23.95■■□□□ 1.42
SQLE-206ENST00000523430 TRIM34Q9BYJ4 488 aa23.95■■□□□ 1.42
SQLE-206ENST00000523430 TSPY26PQ9H489 355 aa23.95■■□□□ 1.42
SQLE-206ENST00000523430 TMOD2Q9NZR1 351 aa23.95■■□□□ 1.42
SQLE-206ENST00000523430 CLIP2Q9UDT6 1046 aa23.95■■□□□ 1.42
SQLE-206ENST00000523430 BAZ2BQ9UIF8 2168 aaKnown RBP23.95■■□□□ 1.42
SQLE-206ENST00000523430 LETM1O95202 739 aaPredicted RBP23.94■■□□□ 1.42
SQLE-206ENST00000523430 EARS2Q5JPH6 523 aaKnown RBP23.94■■□□□ 1.42
SQLE-206ENST00000523430 FSIP1Q8NA03 581 aa23.94■■□□□ 1.42
SQLE-206ENST00000523430 FRMPD2Q68DX3 1309 aaPredicted RBP23.94■■□□□ 1.42
SQLE-206ENST00000523430 SHTN1A0MZ66 631 aa23.94■■□□□ 1.42
SQLE-206ENST00000523430 MARCKSP29966 332 aaPredicted RBP23.94■■□□□ 1.42
SQLE-206ENST00000523430 SPDYE2Q495Y8 402 aa23.94■■□□□ 1.42
SQLE-206ENST00000523430 ADALQ6DHV7 355 aa23.94■■□□□ 1.42
SQLE-206ENST00000523430 TATDN1Q6P1N9 297 aa23.94■■□□□ 1.42
SQLE-206ENST00000523430 CCDC17Q96LX7 622 aa23.94■■□□□ 1.42
SQLE-206ENST00000523430 CSRNP1Q96S65 589 aa23.94■■□□□ 1.42
SQLE-206ENST00000523430 LZTS2Q9BRK4 669 aa23.94■■□□□ 1.42
SQLE-206ENST00000523430 CLSTN2Q9H4D0 955 aa23.94■■□□□ 1.42
SQLE-206ENST00000523430 CNTNAP1P78357 1384 aa23.94■■□□□ 1.42
SQLE-206ENST00000523430 ADAMTS3O15072 1205 aa23.93■■□□□ 1.42
SQLE-206ENST00000523430 PRELPP51888 382 aa23.93■■□□□ 1.42
SQLE-206ENST00000523430 CERKLQ49MI3 558 aaPredicted RBP23.93■■□□□ 1.42
SQLE-206ENST00000523430 TNFRSF25Q93038 417 aa23.93■■□□□ 1.42
SQLE-206ENST00000523430 SPZ1Q9BXG8 430 aa23.93■■□□□ 1.42
SQLE-206ENST00000523430 CABP5Q9NP86 173 aa23.93■■□□□ 1.42
SQLE-206ENST00000523430 ARFGEF1Q9Y6D6 1849 aa23.93■■□□□ 1.42
SQLE-206ENST00000523430 MYH4Q9Y623 1939 aa23.92■■□□□ 1.42
SQLE-206ENST00000523430 A0A1W2PQ27 194 aa23.92■■□□□ 1.42
SQLE-206ENST00000523430 A0A1W2PQ64 194 aa23.92■■□□□ 1.42
SQLE-206ENST00000523430 A0A1W2PQD8 194 aa23.92■■□□□ 1.42
SQLE-206ENST00000523430 NOM1Q5C9Z4 860 aaKnown RBP23.92■■□□□ 1.42
SQLE-206ENST00000523430 RILPL1Q5EBL4 403 aa23.92■■□□□ 1.42
SQLE-206ENST00000523430 AXDND1Q5T1B0 1012 aaPredicted RBP23.92■■□□□ 1.42
SQLE-206ENST00000523430 WWC2Q6AWC2 1192 aa23.92■■□□□ 1.42
SQLE-206ENST00000523430 TYW1BQ6NUM6 668 aa23.92■■□□□ 1.42
SQLE-206ENST00000523430 METTL16Q86W50 562 aaKnown RBP23.92■■□□□ 1.42
SQLE-206ENST00000523430 MRPS27Q92552 414 aaKnown RBP23.92■■□□□ 1.42
SQLE-206ENST00000523430 BRMS1Q9HCU9 246 aa23.92■■□□□ 1.42
SQLE-206ENST00000523430 LTBP3Q9NS15 1303 aa23.92■■□□□ 1.42
SQLE-206ENST00000523430 GDF11O95390 407 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms