RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 MAPK1P28482 360 aa5.61□□□□□ -1.51
PCM1-217ENST00000522998 MAPK8P45983 427 aa5.61□□□□□ -1.51
PCM1-217ENST00000522998 GALK1P51570 392 aa5.61□□□□□ -1.51
PCM1-217ENST00000522998 AFF3P51826 1226 aaKnown RBP5.61□□□□□ -1.51
PCM1-217ENST00000522998 SEPT6Q14141 434 aa5.61□□□□□ -1.51
PCM1-217ENST00000522998 SHISA4Q96DD7 197 aa5.61□□□□□ -1.51
PCM1-217ENST00000522998 C12orf49Q9H741 205 aa5.61□□□□□ -1.51
PCM1-217ENST00000522998 FAM8A1Q9UBU6 413 aa5.61□□□□□ -1.51
PCM1-217ENST00000522998 TTF2Q9UNY4 1162 aaKnown RBP5.61□□□□□ -1.51
PCM1-217ENST00000522998 SRSF3P84103 164 aaKnown RBP5.6□□□□□ -1.51
PCM1-217ENST00000522998 PDE4BQ07343 736 aa5.6□□□□□ -1.51
PCM1-217ENST00000522998 ADGRF1Q5T601 910 aa5.6□□□□□ -1.51
PCM1-217ENST00000522998 ALG1LQ6GMV1 187 aa5.6□□□□□ -1.51
PCM1-217ENST00000522998 MCATQ8IVS2 390 aaKnown RBP5.6□□□□□ -1.51
PCM1-217ENST00000522998 FEZF2Q8TBJ5 459 aa5.6□□□□□ -1.51
PCM1-217ENST00000522998 DACT3Q96B18 629 aaPredicted RBP5.6□□□□□ -1.51
PCM1-217ENST00000522998 SETDB2Q96T68 719 aa5.6□□□□□ -1.51
PCM1-217ENST00000522998 C1orf115Q9H7X2 142 aa5.6□□□□□ -1.51
PCM1-217ENST00000522998 MBD1Q9UIS9 605 aaPredicted RBP5.6□□□□□ -1.51
PCM1-217ENST00000522998 SPG7Q9UQ90 795 aa5.6□□□□□ -1.51
PCM1-217ENST00000522998 ADAMTS20P59510 1910 aa5.59□□□□□ -1.51
PCM1-217ENST00000522998 SLC22A31A6NKX4 558 aa5.59□□□□□ -1.51
PCM1-217ENST00000522998 RPS26P62854 115 aaKnown RBP5.59□□□□□ -1.51
PCM1-217ENST00000522998 TMPRSS5Q9H3S3 457 aa5.59□□□□□ -1.51
PCM1-217ENST00000522998 SIRT5Q9NXA8 310 aa5.59□□□□□ -1.51
PCM1-217ENST00000522998 EBF1Q9UH73 591 aa5.59□□□□□ -1.51
PCM1-217ENST00000522998 PCDHB5Q9Y5E4 795 aa5.59□□□□□ -1.51
PCM1-217ENST00000522998 HRKO00198 91 aa5.58□□□□□ -1.52
PCM1-217ENST00000522998 TEKQ02763 1124 aa5.58□□□□□ -1.52
PCM1-217ENST00000522998 SIRT2Q8IXJ6 389 aa5.58□□□□□ -1.52
PCM1-217ENST00000522998 SP8Q8IXZ3 490 aa5.58□□□□□ -1.52
PCM1-217ENST00000522998 ZDHHC14Q8IZN3 488 aa5.58□□□□□ -1.52
PCM1-217ENST00000522998 ACSF2Q96CM8 615 aaPredicted RBP5.58□□□□□ -1.52
PCM1-217ENST00000522998 ADAM30Q9UKF2 790 aa5.58□□□□□ -1.52
PCM1-217ENST00000522998 LRRN2O75325 713 aa5.57□□□□□ -1.52
PCM1-217ENST00000522998 EPHB3P54753 998 aa5.57□□□□□ -1.52
PCM1-217ENST00000522998 ATP2B2Q01814 1243 aa5.57□□□□□ -1.52
PCM1-217ENST00000522998 FMR1Q06787 632 aaKnown RBP eCLIP5.57□□□□□ -1.52
PCM1-217ENST00000522998 NLRX1Q86UT6 975 aa5.57□□□□□ -1.52
PCM1-217ENST00000522998 CYB5D2Q8WUJ1 264 aa5.57□□□□□ -1.52
PCM1-217ENST00000522998 RNF141Q8WVD5 230 aa5.57□□□□□ -1.52
PCM1-217ENST00000522998 LINC01599Q8WXQ3 324 aa5.57□□□□□ -1.52
PCM1-217ENST00000522998 WWC3Q9ULE0 1092 aa5.57□□□□□ -1.52
PCM1-217ENST00000522998 N4BP3O15049 544 aa5.56□□□□□ -1.52
PCM1-217ENST00000522998 CCDC85BQ15834 202 aaPredicted RBP5.56□□□□□ -1.52
PCM1-217ENST00000522998 VMACQ2NL98 169 aa5.56□□□□□ -1.52
PCM1-217ENST00000522998 TEPSINQ96N21 525 aa5.56□□□□□ -1.52
PCM1-217ENST00000522998 MIR1-1HGQ9H1L0 117 aa5.56□□□□□ -1.52
PCM1-217ENST00000522998 RBM47A0AV96 593 aaKnown RBP5.55□□□□□ -1.52
PCM1-217ENST00000522998 NOTOA8MTQ0 251 aa5.55□□□□□ -1.52
PCM1-217ENST00000522998 VIPR1P32241 457 aa5.55□□□□□ -1.52
PCM1-217ENST00000522998 CLEC16AQ2KHT3 1053 aa5.55□□□□□ -1.52
PCM1-217ENST00000522998 SYT8Q8NBV8 401 aa5.55□□□□□ -1.52
PCM1-217ENST00000522998 FAM13CQ8NE31 585 aa5.55□□□□□ -1.52
PCM1-217ENST00000522998 G6PC3Q9BUM1 346 aa5.55□□□□□ -1.52
PCM1-217ENST00000522998 CNTD2Q9H8S5 307 aa5.55□□□□□ -1.52
PCM1-217ENST00000522998 EPB41L4AQ9HCS5 686 aaPredicted RBP5.55□□□□□ -1.52
PCM1-217ENST00000522998 ZC3H12DA2A288 527 aaKnown RBP5.54□□□□□ -1.52
PCM1-217ENST00000522998 USP2O75604 605 aaPredicted RBP5.54□□□□□ -1.52
PCM1-217ENST00000522998 EFEMP2O95967 443 aa5.54□□□□□ -1.52
PCM1-217ENST00000522998 YARSP54577 528 aaKnown RBP5.54□□□□□ -1.52
PCM1-217ENST00000522998 SLC14A2Q15849 920 aa5.54□□□□□ -1.52
PCM1-217ENST00000522998 ZXDCQ2QGD7 858 aaPredicted RBP5.54□□□□□ -1.52
PCM1-217ENST00000522998 TSNAXIP1Q2TAA8 658 aa5.54□□□□□ -1.52
PCM1-217ENST00000522998 SPATS1Q496A3 300 aa5.54□□□□□ -1.52
PCM1-217ENST00000522998 OLFML2BQ68BL8 750 aa5.54□□□□□ -1.52
PCM1-217ENST00000522998 CNKSR3Q6P9H4 555 aa5.54□□□□□ -1.52
PCM1-217ENST00000522998 AGMOQ6ZNB7 445 aa5.54□□□□□ -1.52
PCM1-217ENST00000522998 ADAM7Q9H2U9 754 aa5.54□□□□□ -1.52
PCM1-217ENST00000522998 CRTAC1Q9NQ79 661 aa5.54□□□□□ -1.52
PCM1-217ENST00000522998 ZNF281Q9Y2X9 895 aa5.54□□□□□ -1.52
PCM1-217ENST00000522998 SHISA3A0PJX4 238 aa5.53□□□□□ -1.52
PCM1-217ENST00000522998 UPK3BL1B0FP48 263 aa5.53□□□□□ -1.52
PCM1-217ENST00000522998 UPK3BL2E5RIL1 263 aa5.53□□□□□ -1.52
PCM1-217ENST00000522998 IRS4O14654 1257 aaPredicted RBP5.53□□□□□ -1.52
PCM1-217ENST00000522998 RPL10P27635 214 aaKnown RBP5.53□□□□□ -1.52
PCM1-217ENST00000522998 TNNI2P48788 182 aa5.53□□□□□ -1.52
PCM1-217ENST00000522998 RPL6Q02878 288 aaKnown RBP5.53□□□□□ -1.52
PCM1-217ENST00000522998 MAP3K11Q16584 847 aa5.53□□□□□ -1.52
PCM1-217ENST00000522998 ZSCAN29Q8IWY8 852 aaPredicted RBP5.53□□□□□ -1.52
PCM1-217ENST00000522998 KRTAP9-8Q9BYQ0 159 aa5.53□□□□□ -1.52
PCM1-217ENST00000522998 LUC7LQ9NQ29 371 aaKnown RBP5.53□□□□□ -1.52
PCM1-217ENST00000522998 ZMYM5Q9UJ78 669 aa5.53□□□□□ -1.52
PCM1-217ENST00000522998 NRDCO43847 1150 aa5.52□□□□□ -1.53
PCM1-217ENST00000522998 PLCG1P19174 1290 aa5.52□□□□□ -1.53
PCM1-217ENST00000522998 LIG3P49916 1009 aa5.52□□□□□ -1.53
PCM1-217ENST00000522998 CDR1P51861 262 aa5.52□□□□□ -1.53
PCM1-217ENST00000522998 PLP2Q04941 152 aa5.52□□□□□ -1.53
PCM1-217ENST00000522998 EFEMP1Q12805 493 aa5.52□□□□□ -1.53
PCM1-217ENST00000522998 RNF111Q6ZNA4 994 aa5.52□□□□□ -1.53
PCM1-217ENST00000522998 CEP128Q6ZU80 1094 aa5.52□□□□□ -1.53
PCM1-217ENST00000522998 MZB1Q8WU39 189 aa5.52□□□□□ -1.53
PCM1-217ENST00000522998 KREMEN1Q96MU8 473 aa5.52□□□□□ -1.53
PCM1-217ENST00000522998 ASPNQ9BXN1 380 aa5.52□□□□□ -1.53
PCM1-217ENST00000522998 CORINQ9Y5Q5 1042 aa5.52□□□□□ -1.53
PCM1-217ENST00000522998 ABLIM1O14639 778 aa5.51□□□□□ -1.53
PCM1-217ENST00000522998 SDHBP21912 280 aa5.51□□□□□ -1.53
PCM1-217ENST00000522998 KIR2DL1P43626 348 aaPredicted RBP5.51□□□□□ -1.53
PCM1-217ENST00000522998 KIR2DL2P43627 348 aaPredicted RBP5.51□□□□□ -1.53
PCM1-217ENST00000522998 YBX1P67809 324 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms