RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 ARHGEF10LQ9HCE6 1279 aa22.38■■□□□ 1.17
SPIDR-220ENST00000522900 RASA1P20936 1047 aa22.37■■□□□ 1.17
SPIDR-220ENST00000522900 ATP2B2Q01814 1243 aa22.37■■□□□ 1.17
SPIDR-220ENST00000522900 AAMPQ13685 434 aa22.37■■□□□ 1.17
SPIDR-220ENST00000522900 COG2Q14746 738 aa22.37■■□□□ 1.17
SPIDR-220ENST00000522900 LRRFIP1Q32MZ4 808 aaKnown RBP22.37■■□□□ 1.17
SPIDR-220ENST00000522900 PLEKHH3Q7Z736 793 aa22.37■■□□□ 1.17
SPIDR-220ENST00000522900 CCAR1Q8IX12 1150 aaKnown RBP22.37■■□□□ 1.17
SPIDR-220ENST00000522900 IFNL3Q8IZI9 196 aa22.37■■□□□ 1.17
SPIDR-220ENST00000522900 NKX2-3Q8TAU0 364 aa22.37■■□□□ 1.17
SPIDR-220ENST00000522900 TRIB2Q92519 343 aa22.37■■□□□ 1.17
SPIDR-220ENST00000522900 USP6NLQ92738 828 aa22.37■■□□□ 1.17
SPIDR-220ENST00000522900 NUDT12Q9BQG2 462 aa22.37■■□□□ 1.17
SPIDR-220ENST00000522900 TANGO6Q9C0B7 1094 aa22.37■■□□□ 1.17
SPIDR-220ENST00000522900 VCPKMTQ9H867 229 aa22.37■■□□□ 1.17
SPIDR-220ENST00000522900 SGPL1O95470 568 aa22.36■■□□□ 1.17
SPIDR-220ENST00000522900 TDO2P48775 406 aa22.36■■□□□ 1.17
SPIDR-220ENST00000522900 MORN1Q5T089 497 aa22.36■■□□□ 1.17
SPIDR-220ENST00000522900 B4GALNT3Q6L9W6 998 aa22.36■■□□□ 1.17
SPIDR-220ENST00000522900 DEFB118Q96PH6 123 aa22.36■■□□□ 1.17
SPIDR-220ENST00000522900 LNPKQ9C0E8 428 aa22.36■■□□□ 1.17
SPIDR-220ENST00000522900 KANSL2Q9H9L4 492 aa22.36■■□□□ 1.17
SPIDR-220ENST00000522900 SUPT16HQ9Y5B9 1047 aaKnown RBP22.36■■□□□ 1.17
SPIDR-220ENST00000522900 HMGCRP04035 888 aa22.35■■□□□ 1.17
SPIDR-220ENST00000522900 CCDC129Q6ZRS4 1044 aa22.35■■□□□ 1.17
SPIDR-220ENST00000522900 UBE2Q1Q7Z7E8 422 aa22.35■■□□□ 1.17
SPIDR-220ENST00000522900 SMC5Q8IY18 1101 aa22.35■■□□□ 1.17
SPIDR-220ENST00000522900 RWDD1Q9H446 243 aaPredicted RBP22.35■■□□□ 1.17
SPIDR-220ENST00000522900 MKNK2Q9HBH9 465 aa22.35■■□□□ 1.17
SPIDR-220ENST00000522900 PAK6Q9NQU5 681 aaPredicted RBP22.35■■□□□ 1.17
SPIDR-220ENST00000522900 HOXC10Q9NYD6 342 aa22.35■■□□□ 1.17
SPIDR-220ENST00000522900 PLXNB2O15031 1838 aa22.34■■□□□ 1.17
SPIDR-220ENST00000522900 PDE4DIPQ5VU43 2346 aa22.34■■□□□ 1.17
SPIDR-220ENST00000522900 FOXP2O15409 715 aa22.34■■□□□ 1.17
SPIDR-220ENST00000522900 PRDM1O75626 825 aa22.34■■□□□ 1.17
SPIDR-220ENST00000522900 CCNA1P78396 465 aa22.34■■□□□ 1.17
SPIDR-220ENST00000522900 CCL14Q16627 93 aa22.34■■□□□ 1.17
SPIDR-220ENST00000522900 SOCS4Q8WXH5 440 aa22.34■■□□□ 1.17
SPIDR-220ENST00000522900 LPAR1Q92633 364 aa22.34■■□□□ 1.17
SPIDR-220ENST00000522900 SH2D4AQ9H788 454 aa22.34■■□□□ 1.17
SPIDR-220ENST00000522900 TFRCP02786 760 aaKnown RBP22.33■■□□□ 1.17
SPIDR-220ENST00000522900 XRCC5P13010 732 aaKnown RBP22.33■■□□□ 1.17
SPIDR-220ENST00000522900 DSG3P32926 999 aa22.33■■□□□ 1.17
SPIDR-220ENST00000522900 WDR78Q5VTH9 848 aa22.33■■□□□ 1.17
SPIDR-220ENST00000522900 EVI5LQ96CN4 794 aa22.33■■□□□ 1.17
SPIDR-220ENST00000522900 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.33■■□□□ 1.17
SPIDR-220ENST00000522900 ROBO3Q96MS0 1386 aa22.33■■□□□ 1.17
SPIDR-220ENST00000522900 SAMD1Q6SPF0 538 aaPredicted RBP22.32■■□□□ 1.16
SPIDR-220ENST00000522900 ATG4CQ96DT6 458 aa22.32■■□□□ 1.16
SPIDR-220ENST00000522900 MOV10L1Q9BXT6 1211 aaKnown RBP22.32■■□□□ 1.16
SPIDR-220ENST00000522900 CWC22Q9HCG8 908 aaKnown RBP22.32■■□□□ 1.16
SPIDR-220ENST00000522900 WDR46O15213 610 aaKnown RBP22.31■■□□□ 1.16
SPIDR-220ENST00000522900 FLOT1O75955 427 aa22.31■■□□□ 1.16
SPIDR-220ENST00000522900 PTPREP23469 700 aa22.31■■□□□ 1.16
SPIDR-220ENST00000522900 RGS2P41220 211 aa22.31■■□□□ 1.16
SPIDR-220ENST00000522900 MAP2K5Q13163 448 aa22.31■■□□□ 1.16
SPIDR-220ENST00000522900 NACAP1Q9BZK3 213 aa22.31■■□□□ 1.16
SPIDR-220ENST00000522900 CRISPLD2Q9H0B8 497 aa22.31■■□□□ 1.16
SPIDR-220ENST00000522900 FBXO28Q9NVF7 368 aa22.31■■□□□ 1.16
SPIDR-220ENST00000522900 RPTORQ8N122 1335 aa22.31■■□□□ 1.16
SPIDR-220ENST00000522900 IGKV6D-41A0A0C4DH26 115 aa22.3■■□□□ 1.16
SPIDR-220ENST00000522900 RAD21O60216 631 aa22.3■■□□□ 1.16
SPIDR-220ENST00000522900 MAP3K21Q5TCX8 1036 aa22.3■■□□□ 1.16
SPIDR-220ENST00000522900 ZNF444Q8N0Y2 327 aaPredicted RBP22.3■■□□□ 1.16
SPIDR-220ENST00000522900 SPATC1LQ9H0A9 340 aa22.3■■□□□ 1.16
SPIDR-220ENST00000522900 NAPBQ9H115 298 aa22.3■■□□□ 1.16
SPIDR-220ENST00000522900 HMX1Q9NP08 348 aaPredicted RBP22.3■■□□□ 1.16
SPIDR-220ENST00000522900 NYAP2Q9P242 653 aa22.3■■□□□ 1.16
SPIDR-220ENST00000522900 SLC15A5A6NIM6 579 aa22.29■■□□□ 1.16
SPIDR-220ENST00000522900 FARP2O94887 1054 aaPredicted RBP22.29■■□□□ 1.16
SPIDR-220ENST00000522900 PRKAR2AP13861 404 aaKnown RBP22.29■■□□□ 1.16
SPIDR-220ENST00000522900 ZKSCAN1P17029 563 aaPredicted RBP22.29■■□□□ 1.16
SPIDR-220ENST00000522900 NUCB1Q02818 461 aa22.29■■□□□ 1.16
SPIDR-220ENST00000522900 PPARAQ07869 468 aa22.29■■□□□ 1.16
SPIDR-220ENST00000522900 CACNB2Q08289 660 aaPredicted RBP22.29■■□□□ 1.16
SPIDR-220ENST00000522900 FAM83BQ5T0W9 1011 aa22.29■■□□□ 1.16
SPIDR-220ENST00000522900 VPS53Q5VIR6 699 aa22.29■■□□□ 1.16
SPIDR-220ENST00000522900 CHD1LQ86WJ1 897 aa22.29■■□□□ 1.16
SPIDR-220ENST00000522900 FAM227BQ96M60 508 aa22.29■■□□□ 1.16
SPIDR-220ENST00000522900 NUP88Q99567 741 aaPredicted RBP22.29■■□□□ 1.16
SPIDR-220ENST00000522900 APBA2Q99767 749 aa22.29■■□□□ 1.16
SPIDR-220ENST00000522900 GOPCQ9HD26 462 aa22.29■■□□□ 1.16
SPIDR-220ENST00000522900 INCENPQ9NQS7 918 aa22.29■■□□□ 1.16
SPIDR-220ENST00000522900 FLRT1Q9NZU1 646 aa22.29■■□□□ 1.16
SPIDR-220ENST00000522900 CLIP2Q9UDT6 1046 aa22.29■■□□□ 1.16
SPIDR-220ENST00000522900 GRB14Q14449 540 aa22.28■■□□□ 1.16
SPIDR-220ENST00000522900 PLS1Q14651 629 aa22.28■■□□□ 1.16
SPIDR-220ENST00000522900 PLEKHM2Q8IWE5 1019 aa22.28■■□□□ 1.16
SPIDR-220ENST00000522900 TRMT44Q8IYL2 757 aaKnown RBP22.28■■□□□ 1.16
SPIDR-220ENST00000522900 NPLOC4Q8TAT6 608 aa22.28■■□□□ 1.16
SPIDR-220ENST00000522900 MYH8P13535 1937 aa22.27■■□□□ 1.16
SPIDR-220ENST00000522900 RLFQ13129 1914 aa22.27■■□□□ 1.16
SPIDR-220ENST00000522900 A0A0D9SFI3 127 aa22.27■■□□□ 1.16
SPIDR-220ENST00000522900 F5H6K3 240 aa22.27■■□□□ 1.16
SPIDR-220ENST00000522900 ERCC3P19447 782 aa22.27■■□□□ 1.16
SPIDR-220ENST00000522900 CTDSPL2Q05D32 466 aa22.27■■□□□ 1.16
SPIDR-220ENST00000522900 KLRC3Q07444 240 aa22.27■■□□□ 1.16
SPIDR-220ENST00000522900 TMEM132BQ14DG7 1078 aa22.27■■□□□ 1.16
SPIDR-220ENST00000522900 FAM47AQ5JRC9 791 aa22.27■■□□□ 1.16
SPIDR-220ENST00000522900 MB21D1Q8N884 522 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms