RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 CNMDO75829 334 aa21.33■■□□□ 1.01
TRAPPC9-211ENST00000521700 ATP2B2Q01814 1243 aa21.33■■□□□ 1.01
TRAPPC9-211ENST00000521700 VPS53Q5VIR6 699 aa21.33■■□□□ 1.01
TRAPPC9-211ENST00000521700 SLAIN1Q8ND83 568 aa21.33■■□□□ 1.01
TRAPPC9-211ENST00000521700 SH2D4AQ9H788 454 aa21.33■■□□□ 1.01
TRAPPC9-211ENST00000521700 VCPKMTQ9H867 229 aa21.33■■□□□ 1.01
TRAPPC9-211ENST00000521700 RABGAP1Q9Y3P9 1069 aa21.33■■□□□ 1.01
TRAPPC9-211ENST00000521700 RBBP6Q7Z6E9 1792 aaKnown RBP21.33■■□□□ 1
TRAPPC9-211ENST00000521700 GREB1LQ9C091 1923 aaPredicted RBP21.32■■□□□ 1
TRAPPC9-211ENST00000521700 PRDM1O75626 825 aa21.32■■□□□ 1
TRAPPC9-211ENST00000521700 EN2P19622 333 aaPredicted RBP21.32■■□□□ 1
TRAPPC9-211ENST00000521700 NMIQ13287 307 aaPredicted RBP21.32■■□□□ 1
TRAPPC9-211ENST00000521700 COG2Q14746 738 aa21.32■■□□□ 1
TRAPPC9-211ENST00000521700 MTFR1Q15390 333 aa21.32■■□□□ 1
TRAPPC9-211ENST00000521700 MCMDC2Q4G0Z9 681 aa21.32■■□□□ 1
TRAPPC9-211ENST00000521700 LBX2Q6XYB7 198 aa21.32■■□□□ 1
TRAPPC9-211ENST00000521700 ZNF444Q8N0Y2 327 aaPredicted RBP21.32■■□□□ 1
TRAPPC9-211ENST00000521700 SPICE1Q8N0Z3 855 aa21.32■■□□□ 1
TRAPPC9-211ENST00000521700 PXYLP1Q8TE99 480 aa21.32■■□□□ 1
TRAPPC9-211ENST00000521700 LPAR1Q92633 364 aa21.32■■□□□ 1
TRAPPC9-211ENST00000521700 ZNF287Q9HBT7 754 aa21.32■■□□□ 1
TRAPPC9-211ENST00000521700 BIN2Q9UBW5 565 aaPredicted RBP21.32■■□□□ 1
TRAPPC9-211ENST00000521700 SPDYE16A6NNV3 312 aaPredicted RBP21.31■■□□□ 1
TRAPPC9-211ENST00000521700 ELNP15502 786 aa21.31■■□□□ 1
TRAPPC9-211ENST00000521700 PPARAQ07869 468 aa21.31■■□□□ 1
TRAPPC9-211ENST00000521700 TANGO6Q9C0B7 1094 aa21.31■■□□□ 1
TRAPPC9-211ENST00000521700 PORCNQ9H237 461 aa21.31■■□□□ 1
TRAPPC9-211ENST00000521700 HOXC10Q9NYD6 342 aa21.31■■□□□ 1
TRAPPC9-211ENST00000521700 BTBD7Q9P203 1132 aa21.31■■□□□ 1
TRAPPC9-211ENST00000521700 SDSP20132 328 aa21.3■■□□□ 1
TRAPPC9-211ENST00000521700 PDE4AP27815 886 aa21.3■■□□□ 1
TRAPPC9-211ENST00000521700 PLXNB2O15031 1838 aa21.29■■□□□ 1
TRAPPC9-211ENST00000521700 RLFQ13129 1914 aa21.29■■□□□ 1
TRAPPC9-211ENST00000521700 IGKV6D-41A0A0C4DH26 115 aa21.29■■□□□ 1
TRAPPC9-211ENST00000521700 SLC3A2P08195 630 aaKnown RBP21.29■■□□□ 1
TRAPPC9-211ENST00000521700 MAPK4P31152 587 aa21.29■■□□□ 1
TRAPPC9-211ENST00000521700 UBXN2AP68543 259 aa21.29■■□□□ 1
TRAPPC9-211ENST00000521700 PDE4BQ07343 736 aa21.29■■□□□ 1
TRAPPC9-211ENST00000521700 ALX1Q15699 326 aa21.29■■□□□ 1
TRAPPC9-211ENST00000521700 NYAP2Q9P242 653 aa21.29■■□□□ 1
TRAPPC9-211ENST00000521700 WDR46O15213 610 aaKnown RBP21.28■■□□□ 1
TRAPPC9-211ENST00000521700 CCL5P13501 91 aa21.28■■□□□ 1
TRAPPC9-211ENST00000521700 DSG3P32926 999 aa21.28■■□□□ 1
TRAPPC9-211ENST00000521700 ZNF589Q86UQ0 364 aaPredicted RBP21.28■■□□□ 1
TRAPPC9-211ENST00000521700 CCAR1Q8IX12 1150 aaKnown RBP21.28■■□□□ 1
TRAPPC9-211ENST00000521700 FLOT1O75955 427 aa21.27■■□□□ 1
TRAPPC9-211ENST00000521700 FGAP02671 866 aa21.27■■□□□ 1
TRAPPC9-211ENST00000521700 HSPD1P10809 573 aaKnown RBP21.27■■□□□ 1
TRAPPC9-211ENST00000521700 CCNA1P78396 465 aa21.27■■□□□ 1
TRAPPC9-211ENST00000521700 CTDSPL2Q05D32 466 aa21.27■■□□□ 1
TRAPPC9-211ENST00000521700 GPR142Q7Z601 462 aa21.27■■□□□ 1
TRAPPC9-211ENST00000521700 PLEKHH3Q7Z736 793 aa21.27■■□□□ 1
TRAPPC9-211ENST00000521700 NEDD1Q8NHV4 660 aa21.27■■□□□ 1
TRAPPC9-211ENST00000521700 NUDT12Q9BQG2 462 aa21.27■■□□□ 1
TRAPPC9-211ENST00000521700 GOPCQ9HD26 462 aa21.27■■□□□ 1
TRAPPC9-211ENST00000521700 INCENPQ9NQS7 918 aa21.27■■□□□ 1
TRAPPC9-211ENST00000521700 ANAPC4Q9UJX5 808 aa21.27■■□□□ 1
TRAPPC9-211ENST00000521700 INHAP05111 366 aa21.26■□□□□ 0.99
TRAPPC9-211ENST00000521700 CYP2B6P20813 491 aa21.26■□□□□ 0.99
TRAPPC9-211ENST00000521700 TFAP4Q01664 338 aa21.26■□□□□ 0.99
TRAPPC9-211ENST00000521700 FAM47AQ5JRC9 791 aa21.26■□□□□ 0.99
TRAPPC9-211ENST00000521700 USP6NLQ92738 828 aa21.26■□□□□ 0.99
TRAPPC9-211ENST00000521700 MKL1Q969V6 931 aa21.26■□□□□ 0.99
TRAPPC9-211ENST00000521700 CEP95Q96GE4 821 aa21.26■□□□□ 0.99
TRAPPC9-211ENST00000521700 RNF208Q9H0X6 261 aa21.26■□□□□ 0.99
TRAPPC9-211ENST00000521700 UNC93B1Q9H1C4 597 aa21.26■□□□□ 0.99
TRAPPC9-211ENST00000521700 MTMR4Q9NYA4 1195 aa21.26■□□□□ 0.99
TRAPPC9-211ENST00000521700 CLIP2Q9UDT6 1046 aa21.26■□□□□ 0.99
TRAPPC9-211ENST00000521700 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.26■□□□□ 0.992e-6■■■■■ 37.3
TRAPPC9-211ENST00000521700 TACC3Q9Y6A5 838 aa21.26■□□□□ 0.99
TRAPPC9-211ENST00000521700 CCDC171Q6TFL3 1326 aa21.26■□□□□ 0.99
TRAPPC9-211ENST00000521700 F5H6K3 240 aa21.25■□□□□ 0.99
TRAPPC9-211ENST00000521700 RAD21O60216 631 aa21.25■□□□□ 0.99
TRAPPC9-211ENST00000521700 TSPY3P0CV98 308 aa21.25■□□□□ 0.99
TRAPPC9-211ENST00000521700 TSPY8P0CW00 308 aa21.25■□□□□ 0.99
TRAPPC9-211ENST00000521700 KLRC3Q07444 240 aa21.25■□□□□ 0.99
TRAPPC9-211ENST00000521700 MORN1Q5T089 497 aa21.25■□□□□ 0.99
TRAPPC9-211ENST00000521700 ATG4CQ96DT6 458 aa21.25■□□□□ 0.99
TRAPPC9-211ENST00000521700 BRCA2P51587 3418 aa21.24■□□□□ 0.99
TRAPPC9-211ENST00000521700 TNRC18O15417 2968 aaPredicted RBP21.24■□□□□ 0.99
TRAPPC9-211ENST00000521700 GJB1P08034 283 aa21.24■□□□□ 0.99
TRAPPC9-211ENST00000521700 XRCC5P13010 732 aaKnown RBP21.24■□□□□ 0.99
TRAPPC9-211ENST00000521700 FAM83BQ5T0W9 1011 aa21.24■□□□□ 0.99
TRAPPC9-211ENST00000521700 SOCS4Q8WXH5 440 aa21.24■□□□□ 0.99
TRAPPC9-211ENST00000521700 FBXO28Q9NVF7 368 aa21.24■□□□□ 0.99
TRAPPC9-211ENST00000521700 PARP14Q460N5 1801 aa21.24■□□□□ 0.99
TRAPPC9-211ENST00000521700 PLIN4Q96Q06 1357 aa21.23■□□□□ 0.99
TRAPPC9-211ENST00000521700 TTLL1O95922 423 aa21.23■□□□□ 0.99
TRAPPC9-211ENST00000521700 NDUFB10O96000 172 aa21.23■□□□□ 0.99
TRAPPC9-211ENST00000521700 WDR78Q5VTH9 848 aa21.23■□□□□ 0.99
TRAPPC9-211ENST00000521700 SAMD1Q6SPF0 538 aaPredicted RBP21.23■□□□□ 0.99
TRAPPC9-211ENST00000521700 CWC27Q6UX04 472 aaKnown RBP21.23■□□□□ 0.99
TRAPPC9-211ENST00000521700 MB21D1Q8N884 522 aa21.23■□□□□ 0.99
TRAPPC9-211ENST00000521700 NUP88Q99567 741 aaPredicted RBP21.23■□□□□ 0.99
TRAPPC9-211ENST00000521700 MOV10L1Q9BXT6 1211 aaKnown RBP21.23■□□□□ 0.99
TRAPPC9-211ENST00000521700 SPATC1LQ9H0A9 340 aa21.23■□□□□ 0.99
TRAPPC9-211ENST00000521700 CWC22Q9HCG8 908 aaKnown RBP21.23■□□□□ 0.99
TRAPPC9-211ENST00000521700 DIAPH3Q9NSV4 1193 aa21.23■□□□□ 0.99
TRAPPC9-211ENST00000521700 ADAMTS5Q9UNA0 930 aa21.23■□□□□ 0.99
TRAPPC9-211ENST00000521700 MYH4Q9Y623 1939 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms