RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 MFSD4AQ8N468 514 aa7.98□□□□□ -1.13
SKP1-208ENST00000521216 PMFBP1Q8TBY8 1022 aa7.98□□□□□ -1.13
SKP1-208ENST00000521216 TRIM55Q9BYV6 548 aa7.98□□□□□ -1.13
SKP1-208ENST00000521216 ST7Q9NRC1 585 aa7.98□□□□□ -1.13
SKP1-208ENST00000521216 SUCOQ9UBS9 1254 aaKnown RBP7.98□□□□□ -1.13
SKP1-208ENST00000521216 ZC3H7BQ9UGR2 993 aaKnown RBP7.98□□□□□ -1.13
SKP1-208ENST00000521216 ADAM23O75077 832 aa7.97□□□□□ -1.13
SKP1-208ENST00000521216 NBPF12Q5TAG4 269 aaPredicted RBP7.97□□□□□ -1.13
SKP1-208ENST00000521216 COX4I2Q96KJ9 171 aa7.97□□□□□ -1.13
SKP1-208ENST00000521216 HIRIP3Q9BW71 556 aaPredicted RBP7.97□□□□□ -1.13
SKP1-208ENST00000521216 ASPNQ9BXN1 380 aa7.97□□□□□ -1.13
SKP1-208ENST00000521216 PHAXQ9H814 394 aaKnown RBP7.97□□□□□ -1.13
SKP1-208ENST00000521216 KCNH3Q9ULD8 1083 aa7.97□□□□□ -1.13
SKP1-208ENST00000521216 C9IYK1 514 aa7.96□□□□□ -1.14
SKP1-208ENST00000521216 DDAH1O94760 285 aa7.96□□□□□ -1.14
SKP1-208ENST00000521216 CEACAM5P06731 702 aa7.96□□□□□ -1.14
SKP1-208ENST00000521216 SSTR4P31391 388 aa7.96□□□□□ -1.14
SKP1-208ENST00000521216 KIR3DL1P43629 444 aa7.96□□□□□ -1.14
SKP1-208ENST00000521216 PMS1P54277 932 aaKnown RBP7.96□□□□□ -1.14
SKP1-208ENST00000521216 SLC7A5Q01650 507 aa7.96□□□□□ -1.14
SKP1-208ENST00000521216 BBS9Q3SYG4 887 aa7.96□□□□□ -1.14
SKP1-208ENST00000521216 VHLLQ6RSH7 139 aa7.96□□□□□ -1.14
SKP1-208ENST00000521216 NETO1Q8TDF5 533 aa7.96□□□□□ -1.14
SKP1-208ENST00000521216 FBXL21Q9UKT6 434 aa7.96□□□□□ -1.14
SKP1-208ENST00000521216 ZNF214Q9UL59 606 aaPredicted RBP7.96□□□□□ -1.14
SKP1-208ENST00000521216 CAPN6Q9Y6Q1 641 aa7.96□□□□□ -1.14
SKP1-208ENST00000521216 U2SURPO15042 1029 aaKnown RBP7.95□□□□□ -1.14
SKP1-208ENST00000521216 COBLO75128 1261 aa7.95□□□□□ -1.14
SKP1-208ENST00000521216 TNK2Q07912 1038 aa7.95□□□□□ -1.14
SKP1-208ENST00000521216 FXNQ16595 210 aa7.95□□□□□ -1.14
SKP1-208ENST00000521216 KIAA1211LQ6NV74 962 aa7.95□□□□□ -1.14
SKP1-208ENST00000521216 PPFIBP1Q86W92 1011 aa7.95□□□□□ -1.14
SKP1-208ENST00000521216 Q96M66 194 aa7.95□□□□□ -1.14
SKP1-208ENST00000521216 FBXL18Q96ME1 805 aa7.95□□□□□ -1.14
SKP1-208ENST00000521216 MKNK2Q9HBH9 465 aa7.95□□□□□ -1.14
SKP1-208ENST00000521216 RNF112Q9ULX5 631 aa7.95□□□□□ -1.14
SKP1-208ENST00000521216 PLAGL2Q9UPG8 496 aa7.95□□□□□ -1.14
SKP1-208ENST00000521216 COL17A1Q9UMD9 1497 aaPredicted RBP7.94□□□□□ -1.14
SKP1-208ENST00000521216 ZNF865P0CJ78 1059 aaPredicted RBP7.94□□□□□ -1.14
SKP1-208ENST00000521216 IFI16Q16666 785 aaKnown RBP7.94□□□□□ -1.14
SKP1-208ENST00000521216 NKPD1Q17RQ9 610 aa7.94□□□□□ -1.14
SKP1-208ENST00000521216 INTS5Q6P9B9 1019 aaKnown RBP7.94□□□□□ -1.14
SKP1-208ENST00000521216 C6orf15Q6UXA7 325 aaPredicted RBP7.94□□□□□ -1.14
SKP1-208ENST00000521216 DTWD2Q8NBA8 298 aa7.94□□□□□ -1.14
SKP1-208ENST00000521216 UBXN4Q92575 508 aa7.94□□□□□ -1.14
SKP1-208ENST00000521216 ARMC5Q96C12 935 aa7.94□□□□□ -1.14
SKP1-208ENST00000521216 VWCEQ96DN2 955 aa7.94□□□□□ -1.14
SKP1-208ENST00000521216 ASCC2Q9H1I8 757 aaPredicted RBP7.94□□□□□ -1.14
SKP1-208ENST00000521216 H3BS24 57 aa7.93□□□□□ -1.14
SKP1-208ENST00000521216 KLF4O43474 513 aa7.93□□□□□ -1.14
SKP1-208ENST00000521216 CLEC16AQ2KHT3 1053 aa7.93□□□□□ -1.14
SKP1-208ENST00000521216 NBPF9Q3BBW0 867 aa7.93□□□□□ -1.14
SKP1-208ENST00000521216 AXDND1Q5T1B0 1012 aaPredicted RBP7.93□□□□□ -1.14
SKP1-208ENST00000521216 DCAF15Q66K64 600 aa7.93□□□□□ -1.14
SKP1-208ENST00000521216 SPACA3Q8IXA5 215 aa7.93□□□□□ -1.14
SKP1-208ENST00000521216 CELF2-AS1Q8N7Q2 184 aa7.93□□□□□ -1.14
SKP1-208ENST00000521216 MICAL1Q8TDZ2 1067 aa7.93□□□□□ -1.14
SKP1-208ENST00000521216 HSPA12BQ96MM6 686 aa7.93□□□□□ -1.14
SKP1-208ENST00000521216 TMEM265A0A087WTH1 108 aa7.92□□□□□ -1.14
SKP1-208ENST00000521216 CCDC85CA6NKD9 419 aa7.92□□□□□ -1.14
SKP1-208ENST00000521216 B2RBV5 119 aa7.92□□□□□ -1.14
SKP1-208ENST00000521216 MED26O95402 600 aa7.92□□□□□ -1.14
SKP1-208ENST00000521216 RBL2Q08999 1139 aa7.92□□□□□ -1.14
SKP1-208ENST00000521216 SNW1Q13573 536 aaKnown RBP7.92□□□□□ -1.14
SKP1-208ENST00000521216 AUHQ13825 339 aaKnown RBP7.92□□□□□ -1.14
SKP1-208ENST00000521216 RAB33AQ14088 237 aa7.92□□□□□ -1.14
SKP1-208ENST00000521216 HEATR6Q6AI08 1181 aaKnown RBP7.92□□□□□ -1.14
SKP1-208ENST00000521216 C22orf34Q6ZV56 151 aa7.92□□□□□ -1.14
SKP1-208ENST00000521216 FAM178BQ8IXR5 827 aa7.92□□□□□ -1.14
SKP1-208ENST00000521216 ZSWIM5Q9P217 1185 aa7.92□□□□□ -1.14
SKP1-208ENST00000521216 PCDHB12Q9Y5F1 795 aa7.92□□□□□ -1.14
SKP1-208ENST00000521216 NCAPHQ15003 741 aa7.91□□□□□ -1.14
SKP1-208ENST00000521216 AOC3Q16853 763 aa7.91□□□□□ -1.14
SKP1-208ENST00000521216 ZMYM1Q5SVZ6 1142 aa7.91□□□□□ -1.14
SKP1-208ENST00000521216 NOL9Q5SY16 702 aaKnown RBP7.91□□□□□ -1.14
SKP1-208ENST00000521216 TMC3Q7Z5M5 1100 aa7.91□□□□□ -1.14
SKP1-208ENST00000521216 ADAT2Q7Z6V5 191 aaKnown RBP7.91□□□□□ -1.14
SKP1-208ENST00000521216 C7orf61Q8IZ16 206 aa7.91□□□□□ -1.14
SKP1-208ENST00000521216 PIWIL2Q8TC59 973 aaKnown RBP7.91□□□□□ -1.14
SKP1-208ENST00000521216 KLHL6Q8WZ60 621 aa7.91□□□□□ -1.14
SKP1-208ENST00000521216 SMARCC1Q92922 1105 aaPredicted RBP7.91□□□□□ -1.14
SKP1-208ENST00000521216 UBE2FQ969M7 185 aa7.91□□□□□ -1.14
SKP1-208ENST00000521216 HRASLS5Q96KN8 279 aa7.91□□□□□ -1.14
SKP1-208ENST00000521216 PRDM14Q9GZV8 571 aa7.91□□□□□ -1.14
SKP1-208ENST00000521216 MEIS1O00470 390 aa7.9□□□□□ -1.14
SKP1-208ENST00000521216 GJB6O95452 261 aa7.9□□□□□ -1.14
SKP1-208ENST00000521216 BNIP3Q12983 259 aa7.9□□□□□ -1.14
SKP1-208ENST00000521216 NMIQ13287 307 aaPredicted RBP7.9□□□□□ -1.14
SKP1-208ENST00000521216 TCEAL1Q15170 157 aa7.9□□□□□ -1.14
SKP1-208ENST00000521216 DDR2Q16832 855 aa7.9□□□□□ -1.14
SKP1-208ENST00000521216 SOGA3Q5TF21 947 aa7.9□□□□□ -1.14
SKP1-208ENST00000521216 FGD4Q96M96 766 aa7.9□□□□□ -1.14
SKP1-208ENST00000521216 BSDC1Q9NW68 430 aaPredicted RBP7.9□□□□□ -1.14
SKP1-208ENST00000521216 GPATCH2Q9NW75 528 aa7.9□□□□□ -1.14
SKP1-208ENST00000521216 ST14Q9Y5Y6 855 aa7.9□□□□□ -1.14
SKP1-208ENST00000521216 SHISA3A0PJX4 238 aa7.89□□□□□ -1.15
SKP1-208ENST00000521216 WASH4PA8MWX3 477 aa7.89□□□□□ -1.15
SKP1-208ENST00000521216 EPHX1P07099 455 aa7.89□□□□□ -1.15
SKP1-208ENST00000521216 CLCN7P51798 805 aa7.89□□□□□ -1.15
SKP1-208ENST00000521216 MSMPQ1L6U9 139 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms