RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 DDNO94850 711 aaPredicted RBP5.62□□□□□ -1.51
VPS13B-208ENST00000521037 CYP2E1P05181 493 aaPredicted RBP5.62□□□□□ -1.51
VPS13B-208ENST00000521037 BRD2P25440 801 aaKnown RBP5.62□□□□□ -1.51
VPS13B-208ENST00000521037 TM4SF1P30408 202 aa5.62□□□□□ -1.51
VPS13B-208ENST00000521037 MAP2K1Q02750 393 aaPredicted RBP5.62□□□□□ -1.51
VPS13B-208ENST00000521037 MSMPQ1L6U9 139 aa5.62□□□□□ -1.51
VPS13B-208ENST00000521037 DEFB115Q30KQ5 88 aa5.62□□□□□ -1.51
VPS13B-208ENST00000521037 NBPF6Q5VWK0 638 aa5.62□□□□□ -1.51
VPS13B-208ENST00000521037 CST9Q5W186 159 aa5.62□□□□□ -1.51
VPS13B-208ENST00000521037 CAPN12Q6ZSI9 719 aa5.62□□□□□ -1.51
VPS13B-208ENST00000521037 NME9Q86XW9 330 aa5.62□□□□□ -1.51
VPS13B-208ENST00000521037 FAM200AQ8TCP9 573 aa5.62□□□□□ -1.51
VPS13B-208ENST00000521037 IP6K1Q92551 441 aa5.62□□□□□ -1.51
VPS13B-208ENST00000521037 NBPF4Q96M43 638 aa5.62□□□□□ -1.51
VPS13B-208ENST00000521037 TAF1DQ9H5J8 278 aaPredicted RBP5.62□□□□□ -1.51
VPS13B-208ENST00000521037 TTC21AQ8NDW8 1320 aa5.62□□□□□ -1.51
VPS13B-208ENST00000521037 COL5A3P25940 1745 aaPredicted RBP5.62□□□□□ -1.51
VPS13B-208ENST00000521037 POLRMTO00411 1230 aaKnown RBP5.61□□□□□ -1.51
VPS13B-208ENST00000521037 ZBTB39O15060 712 aa5.61□□□□□ -1.51
VPS13B-208ENST00000521037 AOC2O75106 756 aa5.61□□□□□ -1.51
VPS13B-208ENST00000521037 INSRP06213 1382 aa5.61□□□□□ -1.51
VPS13B-208ENST00000521037 FBLN1P23142 703 aa5.61□□□□□ -1.51
VPS13B-208ENST00000521037 CDC25BP30305 580 aa5.61□□□□□ -1.51
VPS13B-208ENST00000521037 TMF1P82094 1093 aa5.61□□□□□ -1.51
VPS13B-208ENST00000521037 NCAPD2Q15021 1401 aa5.61□□□□□ -1.51
VPS13B-208ENST00000521037 ZNF831Q5JPB2 1677 aa5.61□□□□□ -1.51
VPS13B-208ENST00000521037 EYSQ5T1H1 3165 aa5.61□□□□□ -1.51
VPS13B-208ENST00000521037 ANKRD34AQ69YU3 496 aa5.61□□□□□ -1.51
VPS13B-208ENST00000521037 SHISA5Q8N114 240 aa5.61□□□□□ -1.51
VPS13B-208ENST00000521037 NLGN1Q8N2Q7 840 aa5.61□□□□□ -1.51
VPS13B-208ENST00000521037 WNT8BQ93098 351 aa5.61□□□□□ -1.51
VPS13B-208ENST00000521037 CCDC97Q96F63 343 aaPredicted RBP5.61□□□□□ -1.51
VPS13B-208ENST00000521037 PRIMPOLQ96LW4 560 aa5.61□□□□□ -1.51
VPS13B-208ENST00000521037 KRTAP4-2Q9BYR5 136 aa5.61□□□□□ -1.51
VPS13B-208ENST00000521037 SEC31BQ9NQW1 1179 aa5.61□□□□□ -1.51
VPS13B-208ENST00000521037 ASAP1Q9ULH1 1129 aa5.61□□□□□ -1.51
VPS13B-208ENST00000521037 MYH14Q7Z406 1995 aaKnown RBP5.6□□□□□ -1.51
VPS13B-208ENST00000521037 CARMIL3Q8ND23 1372 aa5.6□□□□□ -1.51
VPS13B-208ENST00000521037 MEGF11A6BM72 1044 aa5.6□□□□□ -1.51
VPS13B-208ENST00000521037 WDR64B1ANS9 1081 aa5.6□□□□□ -1.51
VPS13B-208ENST00000521037 PRNPP04156 253 aa5.6□□□□□ -1.51
VPS13B-208ENST00000521037 LCE4AQ5TA78 99 aa5.6□□□□□ -1.51
VPS13B-208ENST00000521037 OGFOD2Q6N063 350 aa5.6□□□□□ -1.51
VPS13B-208ENST00000521037 CYP4F22Q6NT55 531 aa5.6□□□□□ -1.51
VPS13B-208ENST00000521037 MPRIPQ6WCQ1 1025 aa5.6□□□□□ -1.51
VPS13B-208ENST00000521037 LDHDQ86WU2 507 aa5.6□□□□□ -1.51
VPS13B-208ENST00000521037 PIK3R5Q8WYR1 880 aa5.6□□□□□ -1.51
VPS13B-208ENST00000521037 CALR3Q96L12 384 aaKnown RBP5.6□□□□□ -1.51
VPS13B-208ENST00000521037 CAPNS2Q96L46 248 aa5.6□□□□□ -1.51
VPS13B-208ENST00000521037 ATG3Q9NT62 314 aa5.6□□□□□ -1.51
VPS13B-208ENST00000521037 CCDC87Q9NVE4 849 aa5.6□□□□□ -1.51
VPS13B-208ENST00000521037 HIF3AQ9Y2N7 669 aa5.6□□□□□ -1.51
VPS13B-208ENST00000521037 CASP8AP2Q9UKL3 1982 aa5.6□□□□□ -1.51
VPS13B-208ENST00000521037 DICER1Q9UPY3 1922 aaKnown RBP5.6□□□□□ -1.51
VPS13B-208ENST00000521037 FER1L6Q2WGJ9 1857 aa5.6□□□□□ -1.51
VPS13B-208ENST00000521037 CCDC88AQ3V6T2 1871 aa5.6□□□□□ -1.51
VPS13B-208ENST00000521037 MAP3K19Q56UN5 1328 aa5.59□□□□□ -1.51
VPS13B-208ENST00000521037 PITPNM2Q9BZ72 1349 aa5.59□□□□□ -1.51
VPS13B-208ENST00000521037 F13BP05160 661 aa5.59□□□□□ -1.51
VPS13B-208ENST00000521037 SRPK2P78362 688 aaKnown RBP5.59□□□□□ -1.51
VPS13B-208ENST00000521037 SWI5Q1ZZU3 235 aa5.59□□□□□ -1.51
VPS13B-208ENST00000521037 HGSNATQ68CP4 663 aa5.59□□□□□ -1.51
VPS13B-208ENST00000521037 C16orf46Q6P387 395 aa5.59□□□□□ -1.51
VPS13B-208ENST00000521037 POU5F2Q8N7G0 328 aa5.59□□□□□ -1.51
VPS13B-208ENST00000521037 SPACA7Q96KW9 195 aa5.59□□□□□ -1.51
VPS13B-208ENST00000521037 OSGEPQ9NPF4 335 aa5.59□□□□□ -1.51
VPS13B-208ENST00000521037 CCDC39Q9UFE4 941 aa5.59□□□□□ -1.51
VPS13B-208ENST00000521037 SRP68Q9UHB9 627 aaKnown RBP5.59□□□□□ -1.51
VPS13B-208ENST00000521037 SALL4Q9UJQ4 1053 aa5.59□□□□□ -1.51
VPS13B-208ENST00000521037 KAT6BQ8WYB5 2073 aa5.59□□□□□ -1.52
VPS13B-208ENST00000521037 SNED1Q8TER0 1413 aa5.58□□□□□ -1.52
VPS13B-208ENST00000521037 H3BRJ5 948 aa5.58□□□□□ -1.52
VPS13B-208ENST00000521037 ITGB5P18084 799 aa5.58□□□□□ -1.52
VPS13B-208ENST00000521037 PTPRAP18433 802 aa5.58□□□□□ -1.52
VPS13B-208ENST00000521037 HOXC9P31274 260 aa5.58□□□□□ -1.52
VPS13B-208ENST00000521037 TTC39BQ5VTQ0 682 aaPredicted RBP5.58□□□□□ -1.52
VPS13B-208ENST00000521037 MAP1SQ66K74 1059 aaPredicted RBP5.58□□□□□ -1.52
VPS13B-208ENST00000521037 USHBP1Q8N6Y0 703 aa5.58□□□□□ -1.52
VPS13B-208ENST00000521037 MFSD14AQ96MC6 490 aa5.58□□□□□ -1.52
VPS13B-208ENST00000521037 GPR101Q96P66 508 aaPredicted RBP5.58□□□□□ -1.52
VPS13B-208ENST00000521037 RNF208Q9H0X6 261 aa5.58□□□□□ -1.52
VPS13B-208ENST00000521037 ABI2Q9NYB9 513 aaPredicted RBP5.58□□□□□ -1.52
VPS13B-208ENST00000521037 CNTN3Q9P232 1028 aa5.58□□□□□ -1.52
VPS13B-208ENST00000521037 COL4A5P29400 1685 aa5.58□□□□□ -1.52
VPS13B-208ENST00000521037 SCN4AP35499 1836 aa5.58□□□□□ -1.52
VPS13B-208ENST00000521037 CNTNAP4Q9C0A0 1308 aa5.57□□□□□ -1.52
VPS13B-208ENST00000521037 ZNF541Q9H0D2 1346 aa5.57□□□□□ -1.52
VPS13B-208ENST00000521037 USP42Q9H9J4 1324 aaKnown RBP5.57□□□□□ -1.52
VPS13B-208ENST00000521037 CENPJQ9HC77 1338 aaPredicted RBP5.57□□□□□ -1.52
VPS13B-208ENST00000521037 LTBP3Q9NS15 1303 aa5.57□□□□□ -1.52
VPS13B-208ENST00000521037 RPS6KA4O75676 772 aa5.57□□□□□ -1.52
VPS13B-208ENST00000521037 FOSL1P15407 271 aa5.57□□□□□ -1.52
VPS13B-208ENST00000521037 SCNN1AP37088 669 aa5.57□□□□□ -1.52
VPS13B-208ENST00000521037 ZAP70P43403 619 aa5.57□□□□□ -1.52
VPS13B-208ENST00000521037 SGO2Q562F6 1265 aa5.57□□□□□ -1.52
VPS13B-208ENST00000521037 FAM117BQ6P1L5 589 aa5.57□□□□□ -1.52
VPS13B-208ENST00000521037 CNTROBQ8N137 903 aa5.57□□□□□ -1.52
VPS13B-208ENST00000521037 SMARCC1Q92922 1105 aaPredicted RBP5.57□□□□□ -1.52
VPS13B-208ENST00000521037 TMPRSS13Q9BYE2 586 aa5.57□□□□□ -1.52
VPS13B-208ENST00000521037 KCNF1Q9H3M0 494 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms