RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 PTPRUQ92729 1446 aa8.79□□□□□ -1
PABPC1-216ENST00000520868 RNGTTO60942 597 aaKnown RBP8.78□□□□□ -1
PABPC1-216ENST00000520868 CELA3AP09093 270 aa8.78□□□□□ -1
PABPC1-216ENST00000520868 CCDC27Q2M243 656 aa8.78□□□□□ -1
PABPC1-216ENST00000520868 OGFOD3Q6PK18 319 aa8.78□□□□□ -1
PABPC1-216ENST00000520868 RNF214Q8ND24 703 aa8.78□□□□□ -1
PABPC1-216ENST00000520868 GRIN3AQ8TCU5 1115 aa8.78□□□□□ -1
PABPC1-216ENST00000520868 COL16A1Q07092 1604 aaPredicted RBP8.77□□□□□ -1.01
PABPC1-216ENST00000520868 HCLS1P14317 486 aaPredicted RBP8.77□□□□□ -1.01
PABPC1-216ENST00000520868 CYP27C1Q4G0S4 372 aa8.77□□□□□ -1.01
PABPC1-216ENST00000520868 NFXL1Q6ZNB6 911 aa8.77□□□□□ -1.01
PABPC1-216ENST00000520868 DDX17Q92841 729 aaKnown RBP8.77□□□□□ -1.01
PABPC1-216ENST00000520868 LRRC4CQ9HCJ2 640 aa8.77□□□□□ -1.01
PABPC1-216ENST00000520868 SSU72Q9NP77 194 aaKnown RBP8.77□□□□□ -1.01
PABPC1-216ENST00000520868 SETD1AO15047 1707 aaKnown RBP8.77□□□□□ -1.01
PABPC1-216ENST00000520868 ROCK1Q13464 1354 aa8.76□□□□□ -1.01
PABPC1-216ENST00000520868 XPCQ01831 940 aaPredicted RBP8.76□□□□□ -1.01
PABPC1-216ENST00000520868 PSMD2Q13200 908 aa8.76□□□□□ -1.01
PABPC1-216ENST00000520868 CDK5R2Q13319 367 aa8.76□□□□□ -1.01
PABPC1-216ENST00000520868 RASIP1Q5U651 963 aa8.76□□□□□ -1.01
PABPC1-216ENST00000520868 GZF1Q9H116 711 aaPredicted RBP8.76□□□□□ -1.01
PABPC1-216ENST00000520868 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.76□□□□□ -1.01
PABPC1-216ENST00000520868 AFF2P51816 1311 aa8.76□□□□□ -1.01
PABPC1-216ENST00000520868 E9PCH4 1651 aa8.75□□□□□ -1.01
PABPC1-216ENST00000520868 UNC13BO14795 1591 aa8.75□□□□□ -1.01
PABPC1-216ENST00000520868 WNT11O96014 354 aa8.75□□□□□ -1.01
PABPC1-216ENST00000520868 NEFMP07197 916 aa8.75□□□□□ -1.01
PABPC1-216ENST00000520868 CCDC85BQ15834 202 aaPredicted RBP8.75□□□□□ -1.01
PABPC1-216ENST00000520868 MCTP1Q6DN14 999 aa8.75□□□□□ -1.01
PABPC1-216ENST00000520868 LRRC59Q96AG4 307 aaKnown RBP8.75□□□□□ -1.01
PABPC1-216ENST00000520868 PICK1Q9NRD5 415 aa8.75□□□□□ -1.01
PABPC1-216ENST00000520868 RNF19AQ9NV58 838 aa8.75□□□□□ -1.01
PABPC1-216ENST00000520868 PARP2Q9UGN5 583 aa8.75□□□□□ -1.01
PABPC1-216ENST00000520868 PCDHA4Q9UN74 947 aa8.75□□□□□ -1.01
PABPC1-216ENST00000520868 TRPM2O94759 1503 aa8.75□□□□□ -1.01
PABPC1-216ENST00000520868 METP08581 1390 aa8.74□□□□□ -1.01
PABPC1-216ENST00000520868 DIP2AQ14689 1571 aa8.74□□□□□ -1.01
PABPC1-216ENST00000520868 AHDC1Q5TGY3 1603 aaPredicted RBP8.74□□□□□ -1.01
PABPC1-216ENST00000520868 RPS26P62854 115 aaKnown RBP8.74□□□□□ -1.01
PABPC1-216ENST00000520868 TTBK2Q6IQ55 1244 aa8.74□□□□□ -1.01
PABPC1-216ENST00000520868 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.74□□□□□ -1.01
PABPC1-216ENST00000520868 ISL2Q96A47 359 aa8.74□□□□□ -1.01
PABPC1-216ENST00000520868 C8orf37Q96NL8 207 aa8.74□□□□□ -1.01
PABPC1-216ENST00000520868 ZC3H7BQ9UGR2 993 aaKnown RBP8.74□□□□□ -1.01
PABPC1-216ENST00000520868 ANGEL1Q9UNK9 670 aaKnown RBP8.74□□□□□ -1.01
PABPC1-216ENST00000520868 FANCGO15287 622 aa8.73□□□□□ -1.01
PABPC1-216ENST00000520868 LMNB1P20700 586 aa8.73□□□□□ -1.01
PABPC1-216ENST00000520868 DAB2P98082 770 aa8.73□□□□□ -1.01
PABPC1-216ENST00000520868 ELMO3Q96BJ8 720 aa8.73□□□□□ -1.01
PABPC1-216ENST00000520868 BSDC1Q9NW68 430 aaPredicted RBP8.73□□□□□ -1.01
PABPC1-216ENST00000520868 CCDC39Q9UFE4 941 aa8.73□□□□□ -1.01
PABPC1-216ENST00000520868 CSADQ9Y600 493 aa8.73□□□□□ -1.01
PABPC1-216ENST00000520868 U3KQE9 123 aa8.73□□□□□ -1.01
PABPC1-216ENST00000520868 IQGAP3Q86VI3 1631 aa8.72□□□□□ -1.01
PABPC1-216ENST00000520868 MST1RQ04912 1400 aa8.72□□□□□ -1.01
PABPC1-216ENST00000520868 DCDC2CA8MYV0 355 aa8.72□□□□□ -1.01
PABPC1-216ENST00000520868 PRNPP04156 253 aa8.72□□□□□ -1.01
PABPC1-216ENST00000520868 FAM87AP0C7U9 286 aa8.72□□□□□ -1.01
PABPC1-216ENST00000520868 PPM1JQ5JR12 505 aa8.72□□□□□ -1.01
PABPC1-216ENST00000520868 TMC4Q7Z404 712 aa8.72□□□□□ -1.01
PABPC1-216ENST00000520868 FBXO33Q7Z6M2 555 aa8.72□□□□□ -1.01
PABPC1-216ENST00000520868 VSIG10LQ86VR7 867 aa8.72□□□□□ -1.01
PABPC1-216ENST00000520868 KCT2Q8NC54 265 aa8.72□□□□□ -1.01
PABPC1-216ENST00000520868 DCCP43146 1447 aa8.71□□□□□ -1.01
PABPC1-216ENST00000520868 SETD5Q9C0A6 1442 aa8.71□□□□□ -1.01
PABPC1-216ENST00000520868 ASXL1Q8IXJ9 1541 aa8.71□□□□□ -1.01
PABPC1-216ENST00000520868 LEFTY1O75610 366 aa8.71□□□□□ -1.02
PABPC1-216ENST00000520868 RLBP1P12271 317 aa8.71□□□□□ -1.02
PABPC1-216ENST00000520868 ST13P50502 369 aaKnown RBP8.71□□□□□ -1.02
PABPC1-216ENST00000520868 RBM6P78332 1123 aaKnown RBP8.71□□□□□ -1.02
PABPC1-216ENST00000520868 RING1Q06587 406 aa8.71□□□□□ -1.02
PABPC1-216ENST00000520868 HDXQ7Z353 690 aa8.71□□□□□ -1.02
PABPC1-216ENST00000520868 ABI1Q8IZP0 508 aa8.71□□□□□ -1.02
PABPC1-216ENST00000520868 ORAI2Q96SN7 254 aa8.71□□□□□ -1.02
PABPC1-216ENST00000520868 SHPRHQ149N8 1683 aa8.71□□□□□ -1.02
PABPC1-216ENST00000520868 IRAK1P51617 712 aa8.7□□□□□ -1.02
PABPC1-216ENST00000520868 ZBTB37Q5TC79 503 aa8.7□□□□□ -1.02
PABPC1-216ENST00000520868 CDC37L1Q7L3B6 337 aa8.7□□□□□ -1.02
PABPC1-216ENST00000520868 UBE3DQ7Z6J8 389 aa8.7□□□□□ -1.02
PABPC1-216ENST00000520868 C12orf40Q86WS4 652 aa8.7□□□□□ -1.02
PABPC1-216ENST00000520868 PNPLA6Q8IY17 1366 aa8.7□□□□□ -1.02
PABPC1-216ENST00000520868 TAL1P17542 331 aaPredicted RBP8.69□□□□□ -1.02
PABPC1-216ENST00000520868 TAF1CQ15572 869 aaPredicted RBP8.69□□□□□ -1.02
PABPC1-216ENST00000520868 DIEXFQ68CQ4 756 aaKnown RBP8.69□□□□□ -1.02
PABPC1-216ENST00000520868 FAM181AQ8N9Y4 354 aa8.69□□□□□ -1.02
PABPC1-216ENST00000520868 GAL3ST3Q96A11 431 aa8.69□□□□□ -1.02
PABPC1-216ENST00000520868 FBXL18Q96ME1 805 aa8.69□□□□□ -1.02
PABPC1-216ENST00000520868 NOC4LQ9BVI4 516 aaKnown RBP8.69□□□□□ -1.02
PABPC1-216ENST00000520868 DUSP23Q9BVJ7 150 aa8.69□□□□□ -1.02
PABPC1-216ENST00000520868 MRS2Q9HD23 443 aa8.69□□□□□ -1.02
PABPC1-216ENST00000520868 SNCAIPQ9Y6H5 919 aa8.69□□□□□ -1.02
PABPC1-216ENST00000520868 ADGRL3Q9HAR2 1447 aa8.69□□□□□ -1.02
PABPC1-216ENST00000520868 SETBP1Q9Y6X0 1596 aa8.69□□□□□ -1.02
PABPC1-216ENST00000520868 NRXN3Q9Y4C0 1643 aa8.69□□□□□ -1.02
PABPC1-216ENST00000520868 SORBS3O60504 671 aa8.68□□□□□ -1.02
PABPC1-216ENST00000520868 NTF4P34130 210 aa8.68□□□□□ -1.02
PABPC1-216ENST00000520868 MEI1Q5TIA1 1274 aa8.68□□□□□ -1.02
PABPC1-216ENST00000520868 AGMOQ6ZNB7 445 aa8.68□□□□□ -1.02
PABPC1-216ENST00000520868 ZNF507Q8TCN5 953 aa8.68□□□□□ -1.02
PABPC1-216ENST00000520868 CRELD1Q96HD1 420 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms