RNA–Protein interactions for RNA: ENST00000520808.6

NPIPB4-205, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 4

Gene NPIPB4, Length 560 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-205	ENST00000520808	DCPS	Q96C86	337 aa	Known RBP	6.58	□□□□□ -1.36
NPIPB4-205	ENST00000520808	TRIM44	Q96DX7	344 aa	Predicted RBP	6.58	□□□□□ -1.36
NPIPB4-205	ENST00000520808	FAM227B	Q96M60	508 aa		6.58	□□□□□ -1.36
NPIPB4-205	ENST00000520808	NEUROD6	Q96NK8	337 aa		6.58	□□□□□ -1.36
NPIPB4-205	ENST00000520808	DBNDD2	Q9BQY9	259 aa		6.58	□□□□□ -1.36
NPIPB4-205	ENST00000520808	TLR7	Q9NYK1	1049 aa	Known RBP	6.58	□□□□□ -1.36
NPIPB4-205	ENST00000520808	GPRC5D	Q9NZD1	345 aa		6.58	□□□□□ -1.36
NPIPB4-205	ENST00000520808	HDAC9	Q9UKV0	1011 aa		6.58	□□□□□ -1.36
NPIPB4-205	ENST00000520808	PCDHB9	Q9Y5E1	797 aa		6.58	□□□□□ -1.36
NPIPB4-205	ENST00000520808	KIAA1551	Q9HCM1	1747 aa		6.58	□□□□□ -1.36
NPIPB4-205	ENST00000520808	ZNF831	Q5JPB2	1677 aa		6.58	□□□□□ -1.36
NPIPB4-205	ENST00000520808	ABCC12	Q96J65	1359 aa		6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	RPAP1	Q9BWH6	1393 aa	Predicted RBP	6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	MAP3K15	Q6ZN16	1313 aa		6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808		A0A0D9SFI3	127 aa		6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	CDC14C	A4D256	554 aa		6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	ZBBX	A8MT70	800 aa		6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	ERVV-1	B6SEH8	477 aa		6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	TAF5L	O75529	589 aa		6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	BBOX1	O75936	387 aa		6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	LETM1	O95202	739 aa	Predicted RBP	6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	ZFY	P08048	801 aa	Predicted RBP	6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	IFIT1	P09914	478 aa	Known RBP	6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	HSP90B1	P14625	803 aa	Known RBP	6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	RPS6KB1	P23443	525 aa		6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	NASP	P49321	788 aa	Predicted RBP	6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	SCNN1D	P51172	638 aa		6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	ZNF157	P51786	506 aa	Predicted RBP	6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	IFIT5	Q13325	482 aa	Known RBP	6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	AOC3	Q16853	763 aa		6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	ADCK5	Q3MIX3	580 aa		6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	TAF7L	Q5H9L4	462 aa		6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	ATG9A	Q7Z3C6	839 aa		6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	USP48	Q86UV5	1035 aa		6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	CCDC83	Q8IWF9	413 aa		6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	TMEM87A	Q8NBN3	555 aa		6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	JARID2	Q92833	1246 aa	Predicted RBP	6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	CRAMP1	Q96RY5	1269 aa		6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	DNAJC2	Q99543	621 aa	Known RBP	6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	DSCC1	Q9BVC3	393 aa		6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	GLIS2	Q9BZE0	524 aa	Predicted RBP	6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	PAG1	Q9NWQ8	432 aa		6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	CNOT7	Q9UIV1	285 aa	Known RBP	6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	ZNF609	O15014	1411 aa		6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	LAMA4	Q16363	1823 aa		6.57	□□□□□ -1.36
NPIPB4-205	ENST00000520808	TRPA1	O75762	1119 aa		6.56	□□□□□ -1.36
NPIPB4-205	ENST00000520808	RAD17	O75943	681 aa		6.56	□□□□□ -1.36
NPIPB4-205	ENST00000520808	F13A1	P00488	732 aa		6.56	□□□□□ -1.36
NPIPB4-205	ENST00000520808	CSF1R	P07333	972 aa		6.56	□□□□□ -1.36
NPIPB4-205	ENST00000520808	SYT1	P21579	422 aa		6.56	□□□□□ -1.36
NPIPB4-205	ENST00000520808	GPT	P24298	496 aa		6.56	□□□□□ -1.36
NPIPB4-205	ENST00000520808	GJB2	P29033	226 aa		6.56	□□□□□ -1.36
NPIPB4-205	ENST00000520808	GMPS	P49915	693 aa	Predicted RBP	6.56	□□□□□ -1.36
NPIPB4-205	ENST00000520808	SOX10	P56693	466 aa		6.56	□□□□□ -1.36
NPIPB4-205	ENST00000520808	CXCL9	Q07325	125 aa		6.56	□□□□□ -1.36
NPIPB4-205	ENST00000520808	HLF	Q16534	295 aa		6.56	□□□□□ -1.36
NPIPB4-205	ENST00000520808	ZSCAN23	Q3MJ62	389 aa		6.56	□□□□□ -1.36
NPIPB4-205	ENST00000520808	GORAB	Q5T7V8	394 aa		6.56	□□□□□ -1.36
NPIPB4-205	ENST00000520808	ZSCAN25	Q6NSZ9	544 aa		6.56	□□□□□ -1.36
NPIPB4-205	ENST00000520808	RGMB	Q6NW40	437 aa		6.56	□□□□□ -1.36
NPIPB4-205	ENST00000520808	LRSAM1	Q6UWE0	723 aa		6.56	□□□□□ -1.36
NPIPB4-205	ENST00000520808	DDX46	Q7L014	1031 aa	Known RBP	6.56	□□□□□ -1.36
NPIPB4-205	ENST00000520808	GAS2L3	Q86XJ1	694 aa		6.56	□□□□□ -1.36
NPIPB4-205	ENST00000520808	NEK1	Q96PY6	1258 aa		6.56	□□□□□ -1.36
NPIPB4-205	ENST00000520808	UTP14A	Q9BVJ6	771 aa	Known RBP	6.56	□□□□□ -1.36
NPIPB4-205	ENST00000520808	KIF3A	Q9Y496	699 aa		6.56	□□□□□ -1.36
NPIPB4-205	ENST00000520808	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	6.56	□□□□□ -1.36
NPIPB4-205	ENST00000520808	BRCA1	P38398	1863 aa	Known RBP	6.56	□□□□□ -1.36
NPIPB4-205	ENST00000520808		A0A1B0GUL7	405 aa		6.55	□□□□□ -1.36
NPIPB4-205	ENST00000520808	ANKRD18B	A2A2Z9	1011 aa		6.55	□□□□□ -1.36
NPIPB4-205	ENST00000520808	GOLIM4	O00461	696 aa		6.55	□□□□□ -1.36
NPIPB4-205	ENST00000520808	RNF113A	O15541	343 aa	Known RBP	6.55	□□□□□ -1.36
NPIPB4-205	ENST00000520808	HOXA10	P31260	410 aa	Predicted RBP	6.55	□□□□□ -1.36
NPIPB4-205	ENST00000520808	UBE2H	P62256	183 aa		6.55	□□□□□ -1.36
NPIPB4-205	ENST00000520808	KIF23	Q02241	960 aa	Predicted RBP	6.55	□□□□□ -1.36
NPIPB4-205	ENST00000520808	PKN2	Q16513	984 aa	Known RBP	6.55	□□□□□ -1.36
NPIPB4-205	ENST00000520808	ME3	Q16798	604 aa		6.55	□□□□□ -1.36
NPIPB4-205	ENST00000520808	CRY2	Q49AN0	593 aa		6.55	□□□□□ -1.36
NPIPB4-205	ENST00000520808	PARP10	Q53GL7	1025 aa		6.55	□□□□□ -1.36
NPIPB4-205	ENST00000520808	TTC39A	Q5SRH9	613 aa		6.55	□□□□□ -1.36
NPIPB4-205	ENST00000520808	ZMYM1	Q5SVZ6	1142 aa		6.55	□□□□□ -1.36
NPIPB4-205	ENST00000520808	SV2A	Q7L0J3	742 aa		6.55	□□□□□ -1.36
NPIPB4-205	ENST00000520808	KRT26	Q7Z3Y9	468 aa		6.55	□□□□□ -1.36
NPIPB4-205	ENST00000520808	ZNF589	Q86UQ0	364 aa	Predicted RBP	6.55	□□□□□ -1.36
NPIPB4-205	ENST00000520808	GPT2	Q8TD30	523 aa		6.55	□□□□□ -1.36
NPIPB4-205	ENST00000520808	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	6.55	□□□□□ -1.36
NPIPB4-205	ENST00000520808	CUEDC1	Q9NWM3	386 aa	Predicted RBP	6.55	□□□□□ -1.36
NPIPB4-205	ENST00000520808	CTNNA3	Q9UI47	895 aa		6.55	□□□□□ -1.36
NPIPB4-205	ENST00000520808	ATP6V0A2	Q9Y487	856 aa		6.55	□□□□□ -1.36
NPIPB4-205	ENST00000520808	COL5A3	P25940	1745 aa	Predicted RBP	6.55	□□□□□ -1.36
NPIPB4-205	ENST00000520808	PDE8A	O60658	829 aa		6.54	□□□□□ -1.36
NPIPB4-205	ENST00000520808	CPA1	P15085	419 aa		6.54	□□□□□ -1.36
NPIPB4-205	ENST00000520808	RHOQ	P17081	205 aa		6.54	□□□□□ -1.36
NPIPB4-205	ENST00000520808	TIMM10	P62072	90 aa		6.54	□□□□□ -1.36
NPIPB4-205	ENST00000520808	KRT85	P78386	507 aa		6.54	□□□□□ -1.36
NPIPB4-205	ENST00000520808	FGD1	P98174	961 aa		6.54	□□□□□ -1.36
NPIPB4-205	ENST00000520808	TTF1	Q15361	905 aa	Predicted RBP	6.54	□□□□□ -1.36
NPIPB4-205	ENST00000520808	TMEM132A	Q24JP5	1023 aa		6.54	□□□□□ -1.36
NPIPB4-205	ENST00000520808	WASHC4	Q2M389	1173 aa		6.54	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms