RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 SLC38A3Q99624 504 aa7.52□□□□□ -1.21
SKP1-207ENST00000520417 ASCC2Q9H1I8 757 aaPredicted RBP7.52□□□□□ -1.21
SKP1-207ENST00000520417 ADAMTS10Q9H324 1103 aa7.52□□□□□ -1.21
SKP1-207ENST00000520417 C19orf73Q9NVV2 129 aa7.52□□□□□ -1.21
SKP1-207ENST00000520417 ADAMTS1Q9UHI8 967 aa7.52□□□□□ -1.21
SKP1-207ENST00000520417 ZNF503-AS2A6NEH8 195 aa7.51□□□□□ -1.21
SKP1-207ENST00000520417 SLC22A31A6NKX4 558 aa7.51□□□□□ -1.21
SKP1-207ENST00000520417 GLI1P08151 1106 aa7.51□□□□□ -1.21
SKP1-207ENST00000520417 TSPYL5Q86VY4 417 aaPredicted RBP7.51□□□□□ -1.21
SKP1-207ENST00000520417 GPR62Q9BZJ7 368 aa7.51□□□□□ -1.21
SKP1-207ENST00000520417 FAM53CQ9NYF3 392 aa7.51□□□□□ -1.21
SKP1-207ENST00000520417 TMEM59LQ9UK28 342 aa7.51□□□□□ -1.21
SKP1-207ENST00000520417 GREM1O60565 184 aa7.5□□□□□ -1.21
SKP1-207ENST00000520417 ERVFC1P60507 584 aa7.5□□□□□ -1.21
SKP1-207ENST00000520417 ABHD4Q8TB40 342 aa7.5□□□□□ -1.21
SKP1-207ENST00000520417 NKD1Q969G9 470 aa7.5□□□□□ -1.21
SKP1-207ENST00000520417 ASPNQ9BXN1 380 aa7.5□□□□□ -1.21
SKP1-207ENST00000520417 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.5□□□□□ -1.21
SKP1-207ENST00000520417 GMIPQ9P107 970 aa7.5□□□□□ -1.21
SKP1-207ENST00000520417 PCDHA11Q9Y5I1 949 aa7.5□□□□□ -1.21
SKP1-207ENST00000520417 POLR2BP30876 1174 aaKnown RBP7.49□□□□□ -1.21
SKP1-207ENST00000520417 ZNF76P36508 570 aa7.49□□□□□ -1.21
SKP1-207ENST00000520417 CLCQ05315 142 aa7.49□□□□□ -1.21
SKP1-207ENST00000520417 OVOS1Q6IE37 1185 aa7.49□□□□□ -1.21
SKP1-207ENST00000520417 MYLIPQ8WY64 445 aa7.49□□□□□ -1.21
SKP1-207ENST00000520417 DIRC2Q96SL1 478 aa7.49□□□□□ -1.21
SKP1-207ENST00000520417 SPON2Q9BUD6 331 aa7.49□□□□□ -1.21
SKP1-207ENST00000520417 LRRC3Q9BY71 257 aa7.49□□□□□ -1.21
SKP1-207ENST00000520417 SHISA3A0PJX4 238 aa7.48□□□□□ -1.21
SKP1-207ENST00000520417 RGS13O14921 159 aa7.48□□□□□ -1.21
SKP1-207ENST00000520417 ZNF165P49910 485 aa7.48□□□□□ -1.21
SKP1-207ENST00000520417 GAB4Q2WGN9 574 aa7.48□□□□□ -1.21
SKP1-207ENST00000520417 PRR23BQ6ZRT6 265 aa7.48□□□□□ -1.21
SKP1-207ENST00000520417 KIAA0825Q8IV33 1275 aa7.48□□□□□ -1.21
SKP1-207ENST00000520417 HOMEZQ8IX15 550 aa7.48□□□□□ -1.21
SKP1-207ENST00000520417 BACH2Q9BYV9 841 aa7.48□□□□□ -1.21
SKP1-207ENST00000520417 KCNQ5Q9NR82 932 aa7.48□□□□□ -1.21
SKP1-207ENST00000520417 UBOX5O94941 541 aa7.47□□□□□ -1.21
SKP1-207ENST00000520417 SRFP11831 508 aa7.47□□□□□ -1.21
SKP1-207ENST00000520417 TRHRP34981 398 aaPredicted RBP7.47□□□□□ -1.21
SKP1-207ENST00000520417 RNF4P78317 190 aa7.47□□□□□ -1.21
SKP1-207ENST00000520417 USP48Q86UV5 1035 aa7.47□□□□□ -1.21
SKP1-207ENST00000520417 ZNF512BQ96KM6 892 aaPredicted RBP7.47□□□□□ -1.21
SKP1-207ENST00000520417 NSUN3Q9H649 340 aaKnown RBP7.47□□□□□ -1.21
SKP1-207ENST00000520417 SSU72P8A0A1W2PR75 194 aa7.46□□□□□ -1.22
SKP1-207ENST00000520417 FAM86C2PA6NEL3 165 aa7.46□□□□□ -1.22
SKP1-207ENST00000520417 BTBD11A6QL63 1104 aa7.46□□□□□ -1.22
SKP1-207ENST00000520417 ATE1O95260 518 aa7.46□□□□□ -1.22
SKP1-207ENST00000520417 NMIQ13287 307 aaPredicted RBP7.46□□□□□ -1.22
SKP1-207ENST00000520417 ATG4CQ96DT6 458 aa7.46□□□□□ -1.22
SKP1-207ENST00000520417 FAM84AQ96KN4 292 aa7.46□□□□□ -1.22
SKP1-207ENST00000520417 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.46□□□□□ -1.22
SKP1-207ENST00000520417 ANTXR1Q9H6X2 564 aa7.46□□□□□ -1.22
SKP1-207ENST00000520417 C19orf44Q9H6X5 657 aa7.46□□□□□ -1.22
SKP1-207ENST00000520417 PCDHGB7Q9Y5F8 929 aa7.46□□□□□ -1.22
SKP1-207ENST00000520417 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.45□□□□□ -1.22
SKP1-207ENST00000520417 CLEC3AO75596 197 aa7.45□□□□□ -1.22
SKP1-207ENST00000520417 ZNF394Q53GI3 561 aa7.45□□□□□ -1.22
SKP1-207ENST00000520417 FBXW10Q5XX13 1052 aa7.45□□□□□ -1.22
SKP1-207ENST00000520417 NLRC3Q7RTR2 1065 aa7.45□□□□□ -1.22
SKP1-207ENST00000520417 DHX38Q92620 1227 aaKnown RBP7.45□□□□□ -1.22
SKP1-207ENST00000520417 EAF1Q96JC9 268 aaPredicted RBP7.45□□□□□ -1.22
SKP1-207ENST00000520417 NT5C1AQ9BXI3 368 aa7.45□□□□□ -1.22
SKP1-207ENST00000520417 EHMT1Q9H9B1 1298 aa7.45□□□□□ -1.22
SKP1-207ENST00000520417 RPL10P27635 214 aaKnown RBP7.44□□□□□ -1.22
SKP1-207ENST00000520417 FZD5Q13467 585 aa7.44□□□□□ -1.22
SKP1-207ENST00000520417 SYDE1Q6ZW31 735 aaPredicted RBP7.44□□□□□ -1.22
SKP1-207ENST00000520417 OXR1Q8N573 874 aa7.44□□□□□ -1.22
SKP1-207ENST00000520417 MKRN2Q9H000 416 aaKnown RBP7.44□□□□□ -1.22
SKP1-207ENST00000520417 KCNK12Q9HB15 430 aa7.44□□□□□ -1.22
SKP1-207ENST00000520417 ZMYM5Q9UJ78 669 aa7.44□□□□□ -1.22
SKP1-207ENST00000520417 RBM47A0AV96 593 aaKnown RBP7.43□□□□□ -1.22
SKP1-207ENST00000520417 MEIS1O00470 390 aa7.43□□□□□ -1.22
SKP1-207ENST00000520417 HPXP02790 462 aa7.43□□□□□ -1.22
SKP1-207ENST00000520417 ZGLP1P0C6A0 271 aa7.43□□□□□ -1.22
SKP1-207ENST00000520417 MESP2Q0VG99 397 aa7.43□□□□□ -1.22
SKP1-207ENST00000520417 SNW1Q13573 536 aaKnown RBP7.43□□□□□ -1.22
SKP1-207ENST00000520417 LDLRAD1Q5T700 205 aa7.43□□□□□ -1.22
SKP1-207ENST00000520417 NBPF12Q5TAG4 269 aaPredicted RBP7.43□□□□□ -1.22
SKP1-207ENST00000520417 CDCP2Q5VXM1 449 aa7.43□□□□□ -1.22
SKP1-207ENST00000520417 TMC3Q7Z5M5 1100 aa7.43□□□□□ -1.22
SKP1-207ENST00000520417 REXO1Q8N1G1 1221 aaKnown RBP7.43□□□□□ -1.22
SKP1-207ENST00000520417 PDZD8Q8NEN9 1154 aa7.43□□□□□ -1.22
SKP1-207ENST00000520417 RNF34Q969K3 372 aa7.43□□□□□ -1.22
SKP1-207ENST00000520417 FERD3LQ96RJ6 166 aa7.43□□□□□ -1.22
SKP1-207ENST00000520417 CNNM2Q9H8M5 875 aa7.43□□□□□ -1.22
SKP1-207ENST00000520417 DCP1AQ9NPI6 582 aaPredicted RBP7.43□□□□□ -1.22
SKP1-207ENST00000520417 FBXL21Q9UKT6 434 aa7.43□□□□□ -1.22
SKP1-207ENST00000520417 FKTNO75072 461 aa7.42□□□□□ -1.22
SKP1-207ENST00000520417 FANCCQ00597 558 aa7.42□□□□□ -1.22
SKP1-207ENST00000520417 RAD51AP2Q09MP3 1159 aa7.42□□□□□ -1.22
SKP1-207ENST00000520417 LRRFIP1Q32MZ4 808 aaKnown RBP7.42□□□□□ -1.22
SKP1-207ENST00000520417 WAPLQ7Z5K2 1190 aa7.42□□□□□ -1.22
SKP1-207ENST00000520417 SLITRK4Q8IW52 837 aa7.42□□□□□ -1.22
SKP1-207ENST00000520417 VWCEQ96DN2 955 aa7.42□□□□□ -1.22
SKP1-207ENST00000520417 FOXP3Q9BZS1 431 aa7.42□□□□□ -1.22
SKP1-207ENST00000520417 RNF32Q9H0A6 362 aa7.42□□□□□ -1.22
SKP1-207ENST00000520417 GPR160Q9UJ42 338 aa7.42□□□□□ -1.22
SKP1-207ENST00000520417 NME1P15531 152 aaKnown RBP7.41□□□□□ -1.22
SKP1-207ENST00000520417 DUSP4Q13115 394 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms