RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 AMOTL1Q8IY63 956 aa29.43■■■□□ 2.3
COL13A1-213ENST00000520267 SARSP49591 514 aaKnown RBP29.43■■■□□ 2.3
COL13A1-213ENST00000520267 NT5DC1Q5TFE4 455 aa29.43■■■□□ 2.3
COL13A1-213ENST00000520267 TMC6Q7Z403 805 aa29.43■■■□□ 2.3
COL13A1-213ENST00000520267 STAG2Q8N3U4 1231 aa29.43■■■□□ 2.3
COL13A1-213ENST00000520267 EPSTI1Q96J88 318 aa29.43■■■□□ 2.3
COL13A1-213ENST00000520267 POLLQ9UGP5 575 aa29.43■■■□□ 2.3
COL13A1-213ENST00000520267 A0A087X0B3 334 aa29.42■■■□□ 2.3
COL13A1-213ENST00000520267 GSDMDP57764 484 aa29.42■■■□□ 2.3
COL13A1-213ENST00000520267 QTRT2Q9H974 415 aaKnown RBP29.42■■■□□ 2.3
COL13A1-213ENST00000520267 EP400Q96L91 3159 aa29.42■■■□□ 2.3
COL13A1-213ENST00000520267 BBOX1O75936 387 aa29.42■■■□□ 2.3
COL13A1-213ENST00000520267 TSPY3P0CV98 308 aa29.41■■■□□ 2.3
COL13A1-213ENST00000520267 TSPY8P0CW00 308 aa29.41■■■□□ 2.3
COL13A1-213ENST00000520267 NT5C2P49902 561 aa29.41■■■□□ 2.3
COL13A1-213ENST00000520267 RBM10P98175 930 aaKnown RBP29.41■■■□□ 2.3
COL13A1-213ENST00000520267 C16orf45Q96MC5 204 aaPredicted RBP29.41■■■□□ 2.3
COL13A1-213ENST00000520267 POLRMTO00411 1230 aaKnown RBP29.41■■■□□ 2.3
COL13A1-213ENST00000520267 TRIM37O94972 964 aa29.41■■■□□ 2.3
COL13A1-213ENST00000520267 HOXA10P31260 410 aaPredicted RBP29.41■■■□□ 2.3
COL13A1-213ENST00000520267 PIK3AP1Q6ZUJ8 805 aa29.41■■■□□ 2.3
COL13A1-213ENST00000520267 ZNF444Q8N0Y2 327 aaPredicted RBP29.41■■■□□ 2.3
COL13A1-213ENST00000520267 TBC1D16Q8TBP0 767 aa29.41■■■□□ 2.3
COL13A1-213ENST00000520267 SMARCE1Q969G3 411 aa29.41■■■□□ 2.3
COL13A1-213ENST00000520267 BRWD3Q6RI45 1802 aa29.4■■■□□ 2.3
COL13A1-213ENST00000520267 GPR75-ASB3A0A0A6YYF3 556 aa29.4■■■□□ 2.3
COL13A1-213ENST00000520267 BMP15O95972 392 aa29.4■■■□□ 2.3
COL13A1-213ENST00000520267 KANK3Q6NY19 840 aa29.4■■■□□ 2.3
COL13A1-213ENST00000520267 FERMT2Q96AC1 680 aa29.4■■■□□ 2.3
COL13A1-213ENST00000520267 FANCLQ9NW38 375 aa29.4■■■□□ 2.3
COL13A1-213ENST00000520267 PODXL2Q9NZ53 605 aa29.4■■■□□ 2.3
COL13A1-213ENST00000520267 GRM4Q14833 912 aa29.4■■■□□ 2.3
COL13A1-213ENST00000520267 DPF2Q92785 391 aa29.4■■■□□ 2.3
COL13A1-213ENST00000520267 DHX58Q96C10 678 aa29.4■■■□□ 2.3
COL13A1-213ENST00000520267 TCP11L1Q9NUJ3 509 aa29.4■■■□□ 2.3
COL13A1-213ENST00000520267 MAD2L2Q9UI95 211 aa29.4■■■□□ 2.3
COL13A1-213ENST00000520267 RASA1P20936 1047 aa29.39■■■□□ 2.3
COL13A1-213ENST00000520267 MORC3Q14149 939 aa29.39■■■□□ 2.3
COL13A1-213ENST00000520267 SYMPKQ92797 1274 aaKnown RBP29.39■■■□□ 2.3
COL13A1-213ENST00000520267 PTGDRQ13258 359 aa29.38■■■□□ 2.29
COL13A1-213ENST00000520267 TPD52L1Q16890 204 aaPredicted RBP29.38■■■□□ 2.29
COL13A1-213ENST00000520267 ZNF827Q17R98 1081 aa29.38■■■□□ 2.29
COL13A1-213ENST00000520267 ATP2C1P98194 919 aaPredicted RBP29.38■■■□□ 2.29
COL13A1-213ENST00000520267 CCDC178Q5BJE1 867 aa29.38■■■□□ 2.29
COL13A1-213ENST00000520267 MFSD14BQ5SR56 506 aa29.38■■■□□ 2.29
COL13A1-213ENST00000520267 TEX11Q8IYF3 940 aa29.38■■■□□ 2.29
COL13A1-213ENST00000520267 GPKOWQ92917 476 aaPredicted RBP eCLIP29.38■■■□□ 2.29
COL13A1-213ENST00000520267 CRAMP1Q96RY5 1269 aa29.38■■■□□ 2.29
COL13A1-213ENST00000520267 DDX60LQ5H9U9 1706 aaKnown RBP29.37■■■□□ 2.29
COL13A1-213ENST00000520267 USP27XA6NNY8 438 aa29.37■■■□□ 2.29
COL13A1-213ENST00000520267 GTF2F1P35269 517 aaKnown RBP eCLIP29.37■■■□□ 2.29
COL13A1-213ENST00000520267 ARMCX5Q6P1M9 558 aa29.37■■■□□ 2.29
COL13A1-213ENST00000520267 UBASH3AP57075 661 aa29.37■■■□□ 2.29
COL13A1-213ENST00000520267 SLC35G1Q2M3R5 365 aa29.37■■■□□ 2.29
COL13A1-213ENST00000520267 SPATA20Q8TB22 786 aa29.37■■■□□ 2.29
COL13A1-213ENST00000520267 SERPINC1P01008 464 aa29.36■■■□□ 2.29
COL13A1-213ENST00000520267 TMEM47Q9BQJ4 181 aa29.36■■■□□ 2.29
COL13A1-213ENST00000520267 MTMR7Q9Y216 660 aa29.36■■■□□ 2.29
COL13A1-213ENST00000520267 LTBP1Q14766 1721 aa29.36■■■□□ 2.29
COL13A1-213ENST00000520267 VWA3AA6NCI4 1184 aa29.36■■■□□ 2.29
COL13A1-213ENST00000520267 C6orf229H3BNL8 230 aa29.36■■■□□ 2.29
COL13A1-213ENST00000520267 TNNT1P13805 278 aa29.36■■■□□ 2.29
COL13A1-213ENST00000520267 CERS3Q8IU89 383 aa29.36■■■□□ 2.29
COL13A1-213ENST00000520267 MLKLQ8NB16 471 aa29.36■■■□□ 2.29
COL13A1-213ENST00000520267 MYH1P12882 1939 aa29.35■■■□□ 2.29
COL13A1-213ENST00000520267 KLRG2A4D1S0 409 aaPredicted RBP29.35■■■□□ 2.29
COL13A1-213ENST00000520267 RIOK3O14730 519 aaKnown RBP29.35■■■□□ 2.29
COL13A1-213ENST00000520267 RHBDL3P58872 404 aa29.35■■■□□ 2.29
COL13A1-213ENST00000520267 FMR1Q06787 632 aaKnown RBP eCLIP29.35■■■□□ 2.29
COL13A1-213ENST00000520267 KRT27Q7Z3Y8 459 aa29.35■■■□□ 2.29
COL13A1-213ENST00000520267 TRIML1Q8N9V2 468 aa29.35■■■□□ 2.29
COL13A1-213ENST00000520267 STX8Q9UNK0 236 aa29.35■■■□□ 2.29
COL13A1-213ENST00000520267 FLT1P17948 1338 aa29.35■■■□□ 2.29
COL13A1-213ENST00000520267 LRRC37AA6NMS7 1700 aa29.34■■■□□ 2.29
COL13A1-213ENST00000520267 SLFN14P0C7P3 912 aa29.34■■■□□ 2.29
COL13A1-213ENST00000520267 TRAPPC10P48553 1259 aa29.34■■■□□ 2.29
COL13A1-213ENST00000520267 CDK8P49336 464 aa29.34■■■□□ 2.29
COL13A1-213ENST00000520267 BLIDQ8IZY5 108 aa29.34■■■□□ 2.29
COL13A1-213ENST00000520267 PROM2Q8N271 834 aa29.34■■■□□ 2.29
COL13A1-213ENST00000520267 CCDC150Q8NCX0 1101 aa29.34■■■□□ 2.29
COL13A1-213ENST00000520267 SNED1Q8TER0 1413 aa29.34■■■□□ 2.29
COL13A1-213ENST00000520267 TSC1Q92574 1164 aa29.34■■■□□ 2.29
COL13A1-213ENST00000520267 FAM205AQ6ZU69 1335 aa29.34■■■□□ 2.29
COL13A1-213ENST00000520267 CALML3P27482 149 aa29.34■■■□□ 2.29
COL13A1-213ENST00000520267 AFMP43652 599 aa29.34■■■□□ 2.29
COL13A1-213ENST00000520267 GNAQP50148 359 aa29.34■■■□□ 2.29
COL13A1-213ENST00000520267 TYW1BQ6NUM6 668 aa29.34■■■□□ 2.29
COL13A1-213ENST00000520267 C16orf86Q6ZW13 317 aa29.34■■■□□ 2.29
COL13A1-213ENST00000520267 SH3RF1Q7Z6J0 888 aa29.34■■■□□ 2.29
COL13A1-213ENST00000520267 FAM163AQ96GL9 167 aaPredicted RBP29.34■■■□□ 2.29
COL13A1-213ENST00000520267 SH3GLB2Q9NR46 395 aa29.34■■■□□ 2.29
COL13A1-213ENST00000520267 CYTH3O43739 400 aa29.33■■■□□ 2.29
COL13A1-213ENST00000520267 MCM7P33993 719 aa29.33■■■□□ 2.29
COL13A1-213ENST00000520267 PAGE5Q96GU1 130 aa29.33■■■□□ 2.29
COL13A1-213ENST00000520267 CBFA2T2O43439 604 aa29.33■■■□□ 2.29
COL13A1-213ENST00000520267 MYO1BO43795 1136 aa29.33■■■□□ 2.29
COL13A1-213ENST00000520267 RRP9O43818 475 aaKnown RBP29.33■■■□□ 2.29
COL13A1-213ENST00000520267 DACH1Q9UI36 760 aa29.33■■■□□ 2.29
COL13A1-213ENST00000520267 HSP90AA2PQ14568 343 aaPredicted RBP29.32■■■□□ 2.28
COL13A1-213ENST00000520267 IL17AQ16552 155 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms