RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 C20orf173Q96LM9 149 aa5.26□□□□□ -1.57
HMGB1P41-201ENST00000520234 FERD3LQ96RJ6 166 aa5.26□□□□□ -1.57
HMGB1P41-201ENST00000520234 GMLQ99445 158 aa5.26□□□□□ -1.57
HMGB1P41-201ENST00000520234 GMIPQ9P107 970 aa5.26□□□□□ -1.57
HMGB1P41-201ENST00000520234 ZNRF3Q9ULT6 936 aa5.26□□□□□ -1.57
HMGB1P41-201ENST00000520234 NFIBO00712 420 aa5.25□□□□□ -1.57
HMGB1P41-201ENST00000520234 DYNC1LI2O43237 492 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P41-201ENST00000520234 C1QTNF9P0C862 333 aa5.25□□□□□ -1.57
HMGB1P41-201ENST00000520234 NASPP49321 788 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P41-201ENST00000520234 KCNMB1Q16558 191 aa5.25□□□□□ -1.57
HMGB1P41-201ENST00000520234 NKG7Q16617 165 aa5.25□□□□□ -1.57
HMGB1P41-201ENST00000520234 CYP27C1Q4G0S4 372 aa5.25□□□□□ -1.57
HMGB1P41-201ENST00000520234 PRAMEF13Q5VWM6 474 aa5.25□□□□□ -1.57
HMGB1P41-201ENST00000520234 OGFOD3Q6PK18 319 aa5.25□□□□□ -1.57
HMGB1P41-201ENST00000520234 UBE3DQ7Z6J8 389 aa5.25□□□□□ -1.57
HMGB1P41-201ENST00000520234 SLFN12Q8IYM2 578 aa5.25□□□□□ -1.57
HMGB1P41-201ENST00000520234 FAM13CQ8NE31 585 aa5.25□□□□□ -1.57
HMGB1P41-201ENST00000520234 OR6P1Q8NGX9 317 aa5.25□□□□□ -1.57
HMGB1P41-201ENST00000520234 CRBNQ96SW2 442 aa5.25□□□□□ -1.57
HMGB1P41-201ENST00000520234 LGR6Q9HBX8 967 aa5.25□□□□□ -1.57
HMGB1P41-201ENST00000520234 PRDM10Q9NQV6 1147 aa5.25□□□□□ -1.57
HMGB1P41-201ENST00000520234 SLC22A31A6NKX4 558 aa5.24□□□□□ -1.57
HMGB1P41-201ENST00000520234 MEIS3P2A8K0S8 358 aa5.24□□□□□ -1.57
HMGB1P41-201ENST00000520234 CD8BP10966 210 aa5.24□□□□□ -1.57
HMGB1P41-201ENST00000520234 CDK5R2Q13319 367 aa5.24□□□□□ -1.57
HMGB1P41-201ENST00000520234 CDCP2Q5VXM1 449 aa5.24□□□□□ -1.57
HMGB1P41-201ENST00000520234 RBBP8NLQ8NC74 664 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P41-201ENST00000520234 CPLX3Q8WVH0 158 aa5.24□□□□□ -1.57
HMGB1P41-201ENST00000520234 BORCS6Q96GS4 357 aa5.24□□□□□ -1.57
HMGB1P41-201ENST00000520234 DUSP23Q9BVJ7 150 aa5.24□□□□□ -1.57
HMGB1P41-201ENST00000520234 SRRTQ9BXP5 876 aaKnown RBP5.24□□□□□ -1.57
HMGB1P41-201ENST00000520234 EIF6P56537 245 aaKnown RBP5.23□□□□□ -1.57
HMGB1P41-201ENST00000520234 BNIP3Q12983 259 aa5.23□□□□□ -1.57
HMGB1P41-201ENST00000520234 FBXW10Q5XX13 1052 aa5.23□□□□□ -1.57
HMGB1P41-201ENST00000520234 INTS3Q68E01 1043 aaKnown RBP5.23□□□□□ -1.57
HMGB1P41-201ENST00000520234 ZNF746Q6NUN9 644 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P41-201ENST00000520234 NLRC3Q7RTR2 1065 aa5.23□□□□□ -1.57
HMGB1P41-201ENST00000520234 TAB3Q8N5C8 712 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P41-201ENST00000520234 CYB5D2Q8WUJ1 264 aa5.23□□□□□ -1.57
HMGB1P41-201ENST00000520234 TM9SF2Q99805 663 aa5.23□□□□□ -1.57
HMGB1P41-201ENST00000520234 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.23□□□□□ -1.57
HMGB1P41-201ENST00000520234 TMPRSS5Q9H3S3 457 aa5.23□□□□□ -1.57
HMGB1P41-201ENST00000520234 CNNM2Q9H8M5 875 aa5.23□□□□□ -1.57
HMGB1P41-201ENST00000520234 KLHL3Q9UH77 587 aa5.23□□□□□ -1.57
HMGB1P41-201ENST00000520234 PPT2Q9UMR5 302 aa5.23□□□□□ -1.57
HMGB1P41-201ENST00000520234 UPK3BL1B0FP48 263 aa5.22□□□□□ -1.57
HMGB1P41-201ENST00000520234 CHURC1-FNTBB4DL54 471 aa5.22□□□□□ -1.57
HMGB1P41-201ENST00000520234 UPK3BL2E5RIL1 263 aa5.22□□□□□ -1.57
HMGB1P41-201ENST00000520234 FOXD2O60548 495 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P41-201ENST00000520234 KRT1P04264 644 aa5.22□□□□□ -1.57
HMGB1P41-201ENST00000520234 SSBP05455 408 aaKnown RBP eCLIP5.22□□□□□ -1.57
HMGB1P41-201ENST00000520234 FAM87AP0C7U9 286 aa5.22□□□□□ -1.57
HMGB1P41-201ENST00000520234 RAG1P15918 1043 aa5.22□□□□□ -1.57
HMGB1P41-201ENST00000520234 DNAJA1P31689 397 aaKnown RBP5.22□□□□□ -1.57
HMGB1P41-201ENST00000520234 CCNFP41002 786 aa5.22□□□□□ -1.57
HMGB1P41-201ENST00000520234 ETV3P41162 512 aa5.22□□□□□ -1.57
HMGB1P41-201ENST00000520234 GIPRP48546 466 aa5.22□□□□□ -1.57
HMGB1P41-201ENST00000520234 OVOS1Q6IE37 1185 aa5.22□□□□□ -1.57
HMGB1P41-201ENST00000520234 LETMD1Q6P1Q0 360 aa5.22□□□□□ -1.57
HMGB1P41-201ENST00000520234 TOP6BLQ8N6T0 577 aa5.22□□□□□ -1.57
HMGB1P41-201ENST00000520234 ATG4CQ96DT6 458 aa5.22□□□□□ -1.57
HMGB1P41-201ENST00000520234 COX4I2Q96KJ9 171 aa5.22□□□□□ -1.57
HMGB1P41-201ENST00000520234 CCDC74BQ96LY2 380 aa5.22□□□□□ -1.57
HMGB1P41-201ENST00000520234 GTF2IRD1Q9UHL9 959 aa5.22□□□□□ -1.57
HMGB1P41-201ENST00000520234 CEP131Q9UPN4 1083 aa5.22□□□□□ -1.57
HMGB1P41-201ENST00000520234 IGF2BP3O00425 579 aaKnown RBP eCLIP5.21□□□□□ -1.58
HMGB1P41-201ENST00000520234 RGS13O14921 159 aa5.21□□□□□ -1.58
HMGB1P41-201ENST00000520234 DNAJA2O60884 412 aa5.21□□□□□ -1.58
HMGB1P41-201ENST00000520234 SLITRK5O94991 958 aa5.21□□□□□ -1.58
HMGB1P41-201ENST00000520234 FGRP09769 529 aa5.21□□□□□ -1.58
HMGB1P41-201ENST00000520234 NME1P15531 152 aaKnown RBP5.21□□□□□ -1.58
HMGB1P41-201ENST00000520234 CYP7A1P22680 504 aa5.21□□□□□ -1.58
HMGB1P41-201ENST00000520234 SF3A1Q15459 793 aaKnown RBP5.21□□□□□ -1.58
HMGB1P41-201ENST00000520234 ARSHQ5FYA8 562 aa5.21□□□□□ -1.58
HMGB1P41-201ENST00000520234 CIAPIN1Q6FI81 312 aa5.21□□□□□ -1.58
HMGB1P41-201ENST00000520234 PHACTR4Q8IZ21 702 aa5.21□□□□□ -1.58
HMGB1P41-201ENST00000520234 SHDQ96IW2 340 aa5.21□□□□□ -1.58
HMGB1P41-201ENST00000520234 MIPEPQ99797 713 aa5.21□□□□□ -1.58
HMGB1P41-201ENST00000520234 DPH2Q9BQC3 489 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P41-201ENST00000520234 NISCHQ9Y2I1 1504 aa5.21□□□□□ -1.58
HMGB1P41-201ENST00000520234 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P41-201ENST00000520234 NPIPB6E9PJ23 425 aa5.2□□□□□ -1.58
HMGB1P41-201ENST00000520234 TNFRSF10CO14798 259 aa5.2□□□□□ -1.58
HMGB1P41-201ENST00000520234 LEFTY1O75610 366 aa5.2□□□□□ -1.58
HMGB1P41-201ENST00000520234 EOMESO95936 686 aa5.2□□□□□ -1.58
HMGB1P41-201ENST00000520234 SYN1P17600 705 aa5.2□□□□□ -1.58
HMGB1P41-201ENST00000520234 CCDC81Q6ZN84 652 aa5.2□□□□□ -1.58
HMGB1P41-201ENST00000520234 GGNQ86UU5 652 aa5.2□□□□□ -1.58
HMGB1P41-201ENST00000520234 MCF2L2Q86YR7 1114 aa5.2□□□□□ -1.58
HMGB1P41-201ENST00000520234 C19orf47Q8N9M1 422 aaKnown RBP5.2□□□□□ -1.58
HMGB1P41-201ENST00000520234 DNAJB8Q8NHS0 232 aa5.2□□□□□ -1.58
HMGB1P41-201ENST00000520234 XAGE3Q8WTP9 111 aa5.2□□□□□ -1.58
HMGB1P41-201ENST00000520234 LIN37Q96GY3 246 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P41-201ENST00000520234 DHRS1Q96LJ7 313 aa5.2□□□□□ -1.58
HMGB1P41-201ENST00000520234 KIF2CQ99661 725 aa5.2□□□□□ -1.58
HMGB1P41-201ENST00000520234 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.2□□□□□ -1.58
HMGB1P41-201ENST00000520234 ANTXR1Q9H6X2 564 aa5.2□□□□□ -1.58
HMGB1P41-201ENST00000520234 MKNK2Q9HBH9 465 aa5.2□□□□□ -1.58
HMGB1P41-201ENST00000520234 PRDM5Q9NQX1 630 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P41-201ENST00000520234 VAV3Q9UKW4 847 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms