RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 CMA1P23946 247 aa31.01■■■□□ 2.56
COL13A1-212ENST00000520133 POLD1P28340 1107 aa31.01■■■□□ 2.56
COL13A1-212ENST00000520133 MARCKSP29966 332 aaPredicted RBP31.01■■■□□ 2.56
COL13A1-212ENST00000520133 AXDND1Q5T1B0 1012 aaPredicted RBP31.01■■■□□ 2.56
COL13A1-212ENST00000520133 LARGE2Q8N3Y3 721 aa31.01■■■□□ 2.56
COL13A1-212ENST00000520133 SHISA4Q96DD7 197 aa31.01■■■□□ 2.56
COL13A1-212ENST00000520133 FMR1NBQ8N0W7 255 aaPredicted RBP31.01■■■□□ 2.55
COL13A1-212ENST00000520133 PPP1R9BQ96SB3 815 aa31.01■■■□□ 2.55
COL13A1-212ENST00000520133 CEP131Q9UPN4 1083 aa31.01■■■□□ 2.55
COL13A1-212ENST00000520133 A0A1B0GVL5 298 aa31■■■□□ 2.55
COL13A1-212ENST00000520133 TOB1P50616 345 aaPredicted RBP31■■■□□ 2.55
COL13A1-212ENST00000520133 SASS6Q6UVJ0 657 aa31■■■□□ 2.55
COL13A1-212ENST00000520133 CABP5Q9NP86 173 aa31■■■□□ 2.55
COL13A1-212ENST00000520133 SH3GLB2Q9NR46 395 aa31■■■□□ 2.55
COL13A1-212ENST00000520133 MTMR4Q9NYA4 1195 aa31■■■□□ 2.55
COL13A1-212ENST00000520133 PIM2Q9P1W9 311 aa31■■■□□ 2.55
COL13A1-212ENST00000520133 MTMR7Q9Y216 660 aa31■■■□□ 2.55
COL13A1-212ENST00000520133 PARP1P09874 1014 aaKnown RBP30.99■■■□□ 2.55
COL13A1-212ENST00000520133 TYRO3Q06418 890 aa30.99■■■□□ 2.55
COL13A1-212ENST00000520133 ZBTB7AO95365 584 aa30.98■■■□□ 2.55
COL13A1-212ENST00000520133 AKR1B1P15121 316 aa30.98■■■□□ 2.55
COL13A1-212ENST00000520133 NLRP5P59047 1200 aa30.98■■■□□ 2.55
COL13A1-212ENST00000520133 PCDHAC2Q9Y5I4 1007 aa30.98■■■□□ 2.55
COL13A1-212ENST00000520133 CUTAO60888 179 aa30.98■■■□□ 2.55
COL13A1-212ENST00000520133 CALML3P27482 149 aa30.98■■■□□ 2.55
COL13A1-212ENST00000520133 SHMT1P34896 483 aa30.98■■■□□ 2.55
COL13A1-212ENST00000520133 NDUFA8P51970 172 aa30.98■■■□□ 2.55
COL13A1-212ENST00000520133 PIBF1Q8WXW3 757 aa30.98■■■□□ 2.55
COL13A1-212ENST00000520133 KLRF2D3W0D1 207 aa30.97■■■□□ 2.55
COL13A1-212ENST00000520133 CFAP100Q494V2 611 aa30.97■■■□□ 2.55
COL13A1-212ENST00000520133 PPP4R3BQ5MIZ7 849 aa30.97■■■□□ 2.55
COL13A1-212ENST00000520133 RSBN1LQ6PCB5 846 aaPredicted RBP30.97■■■□□ 2.55
COL13A1-212ENST00000520133 CCDC17Q96LX7 622 aa30.97■■■□□ 2.55
COL13A1-212ENST00000520133 MTFR1LQ9H019 292 aa30.97■■■□□ 2.55
COL13A1-212ENST00000520133 ZNF277Q9NRM2 450 aaPredicted RBP30.97■■■□□ 2.55
COL13A1-212ENST00000520133 PI4KBQ9UBF8 816 aa30.97■■■□□ 2.55
COL13A1-212ENST00000520133 NOL7Q9UMY1 257 aaKnown RBP30.97■■■□□ 2.55
COL13A1-212ENST00000520133 IGKV6D-41A0A0C4DH26 115 aa30.96■■■□□ 2.55
COL13A1-212ENST00000520133 SMARCA1P28370 1054 aa30.96■■■□□ 2.55
COL13A1-212ENST00000520133 SPZ1Q9BXG8 430 aa30.96■■■□□ 2.55
COL13A1-212ENST00000520133 FAM198AQ9UFP1 575 aa30.96■■■□□ 2.55
COL13A1-212ENST00000520133 CACNB3P54284 484 aa30.96■■■□□ 2.55
COL13A1-212ENST00000520133 TCP10Q12799 353 aa30.96■■■□□ 2.55
COL13A1-212ENST00000520133 FAM177A1Q8N128 213 aaPredicted RBP30.96■■■□□ 2.55
COL13A1-212ENST00000520133 KRI1Q8N9T8 703 aaKnown RBP30.96■■■□□ 2.55
COL13A1-212ENST00000520133 TTLL1O95922 423 aa30.95■■■□□ 2.55
COL13A1-212ENST00000520133 ZSCAN29Q8IWY8 852 aaPredicted RBP30.95■■■□□ 2.55
COL13A1-212ENST00000520133 ZFPM1Q8IX07 1006 aa30.95■■■□□ 2.55
COL13A1-212ENST00000520133 GREB1LQ9C091 1923 aaPredicted RBP30.95■■■□□ 2.54
COL13A1-212ENST00000520133 NPY5RQ15761 445 aa30.94■■■□□ 2.54
COL13A1-212ENST00000520133 HDAC9Q9UKV0 1011 aa30.94■■■□□ 2.54
COL13A1-212ENST00000520133 ATF5Q9Y2D1 282 aaPredicted RBP30.94■■■□□ 2.54
COL13A1-212ENST00000520133 MRVI1Q9Y6F6 885 aa30.94■■■□□ 2.54
COL13A1-212ENST00000520133 SIPA1L1O43166 1804 aa30.94■■■□□ 2.54
COL13A1-212ENST00000520133 TRIM75PA6NK02 468 aa30.94■■■□□ 2.54
COL13A1-212ENST00000520133 VIL1P09327 827 aaKnown RBP30.94■■■□□ 2.54
COL13A1-212ENST00000520133 GOLGA8HP0CJ92 632 aa30.94■■■□□ 2.54
COL13A1-212ENST00000520133 PFKFB1P16118 471 aa30.94■■■□□ 2.54
COL13A1-212ENST00000520133 CCDC148Q8NFR7 591 aa30.94■■■□□ 2.54
COL13A1-212ENST00000520133 TNFRSF25Q93038 417 aa30.94■■■□□ 2.54
COL13A1-212ENST00000520133 TRIM44Q96DX7 344 aaPredicted RBP30.94■■■□□ 2.54
COL13A1-212ENST00000520133 SDF4Q9BRK5 362 aa30.94■■■□□ 2.54
COL13A1-212ENST00000520133 TRIM34Q9BYJ4 488 aa30.94■■■□□ 2.54
COL13A1-212ENST00000520133 PCDHB6Q9Y5E3 794 aa30.94■■■□□ 2.54
COL13A1-212ENST00000520133 CYTH3O43739 400 aa30.93■■■□□ 2.54
COL13A1-212ENST00000520133 ENTPD3O75355 529 aa30.93■■■□□ 2.54
COL13A1-212ENST00000520133 FAM200AQ8TCP9 573 aa30.93■■■□□ 2.54
COL13A1-212ENST00000520133 TDRD3Q9H7E2 651 aaKnown RBP30.93■■■□□ 2.54
COL13A1-212ENST00000520133 MORC2Q9Y6X9 1032 aaPredicted RBP30.93■■■□□ 2.54
COL13A1-212ENST00000520133 MYH4Q9Y623 1939 aa30.92■■■□□ 2.54
COL13A1-212ENST00000520133 CAVIN2O95810 425 aa30.92■■■□□ 2.54
COL13A1-212ENST00000520133 BMP15O95972 392 aa30.92■■■□□ 2.54
COL13A1-212ENST00000520133 USP17L2Q6R6M4 530 aa30.92■■■□□ 2.54
COL13A1-212ENST00000520133 FOXP4Q8IVH2 680 aaPredicted RBP30.92■■■□□ 2.54
COL13A1-212ENST00000520133 DDTLA6NHG4 134 aaPredicted RBP30.91■■■□□ 2.54
COL13A1-212ENST00000520133 PSMD14O00487 310 aa30.91■■■□□ 2.54
COL13A1-212ENST00000520133 MPHOSPH10O00566 681 aaKnown RBP30.91■■■□□ 2.54
COL13A1-212ENST00000520133 RAD17O75943 681 aa30.91■■■□□ 2.54
COL13A1-212ENST00000520133 ZNF202O95125 648 aa30.91■■■□□ 2.54
COL13A1-212ENST00000520133 DALRD3Q5D0E6 543 aaKnown RBP30.91■■■□□ 2.54
COL13A1-212ENST00000520133 RESP18Q5W5W9 173 aa30.91■■■□□ 2.54
COL13A1-212ENST00000520133 GALNT17Q6IS24 598 aa30.91■■■□□ 2.54
COL13A1-212ENST00000520133 SHC4Q6S5L8 630 aa30.91■■■□□ 2.54
COL13A1-212ENST00000520133 NIM1KQ8IY84 436 aa30.91■■■□□ 2.54
COL13A1-212ENST00000520133 FAM237AA0A1B0GTK4 181 aa30.91■■■□□ 2.54
COL13A1-212ENST00000520133 ATP2B1P20020 1258 aa30.91■■■□□ 2.54
COL13A1-212ENST00000520133 OGFOD1Q8N543 542 aa30.91■■■□□ 2.54
COL13A1-212ENST00000520133 PDLIM2Q96JY6 352 aa30.91■■■□□ 2.54
COL13A1-212ENST00000520133 PRMT6Q96LA8 375 aaPredicted RBP30.91■■■□□ 2.54
COL13A1-212ENST00000520133 TMOD2Q9NZR1 351 aa30.91■■■□□ 2.54
COL13A1-212ENST00000520133 CLIP2Q9UDT6 1046 aa30.91■■■□□ 2.54
COL13A1-212ENST00000520133 ZNRF3Q9ULT6 936 aa30.91■■■□□ 2.54
COL13A1-212ENST00000520133 PDHBP11177 359 aa30.9■■■□□ 2.54
COL13A1-212ENST00000520133 VEGFAP15692 232 aaPredicted RBP30.9■■■□□ 2.54
COL13A1-212ENST00000520133 PTPREP23469 700 aa30.9■■■□□ 2.54
COL13A1-212ENST00000520133 SYKP43405 635 aa30.9■■■□□ 2.54
COL13A1-212ENST00000520133 SLC35G1Q2M3R5 365 aa30.9■■■□□ 2.54
COL13A1-212ENST00000520133 ASPRV1Q53RT3 343 aa30.9■■■□□ 2.54
COL13A1-212ENST00000520133 GPKOWQ92917 476 aaPredicted RBP eCLIP30.9■■■□□ 2.54
COL13A1-212ENST00000520133 TIGD1Q96MW7 591 aa30.9■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms