RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 AGGF1Q8N302 714 aaeCLIP7.55□□□□□ -1.2
HMGB1P46-201ENST00000520062 DNAJB8Q8NHS0 232 aa7.55□□□□□ -1.2
HMGB1P46-201ENST00000520062 LENG1Q96BZ8 264 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P46-201ENST00000520062 ARHGEF4Q9NR80 690 aa7.55□□□□□ -1.2
HMGB1P46-201ENST00000520062 WHRNQ9P202 907 aa7.55□□□□□ -1.2
HMGB1P46-201ENST00000520062 TRAV20A0A0B4J274 112 aa7.54□□□□□ -1.2
HMGB1P46-201ENST00000520062 SPATA31C1P0DKV0 1188 aa7.54□□□□□ -1.2
HMGB1P46-201ENST00000520062 PREPP48147 710 aa7.54□□□□□ -1.2
HMGB1P46-201ENST00000520062 NRG1Q02297 640 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P46-201ENST00000520062 UVSSAQ2YD98 709 aa7.54□□□□□ -1.2
HMGB1P46-201ENST00000520062 NBPF12Q5TAG4 269 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P46-201ENST00000520062 ZNF513Q8N8E2 541 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P46-201ENST00000520062 KISS1RQ969F8 398 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P46-201ENST00000520062 VWCEQ96DN2 955 aa7.54□□□□□ -1.2
HMGB1P46-201ENST00000520062 AARSD1Q9BTE6 412 aaKnown RBP7.54□□□□□ -1.2
HMGB1P46-201ENST00000520062 ASPNQ9BXN1 380 aa7.54□□□□□ -1.2
HMGB1P46-201ENST00000520062 MKRN2Q9H000 416 aaKnown RBP7.54□□□□□ -1.2
HMGB1P46-201ENST00000520062 CD2APQ9Y5K6 639 aa7.54□□□□□ -1.2
HMGB1P46-201ENST00000520062 COL17A1Q9UMD9 1497 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P46-201ENST00000520062 KRBA1A5PL33 1030 aa7.53□□□□□ -1.2
HMGB1P46-201ENST00000520062 SART1O43290 800 aaKnown RBP7.53□□□□□ -1.2
HMGB1P46-201ENST00000520062 GAS2O43903 313 aaKnown RBP7.53□□□□□ -1.2
HMGB1P46-201ENST00000520062 PPM1BO75688 479 aa7.53□□□□□ -1.2
HMGB1P46-201ENST00000520062 ETV3P41162 512 aa7.53□□□□□ -1.2
HMGB1P46-201ENST00000520062 USP11P51784 963 aa7.53□□□□□ -1.2
HMGB1P46-201ENST00000520062 LETMD1Q6P1Q0 360 aa7.53□□□□□ -1.2
HMGB1P46-201ENST00000520062 PODNQ7Z5L7 613 aa7.53□□□□□ -1.2
HMGB1P46-201ENST00000520062 C7orf61Q8IZ16 206 aa7.53□□□□□ -1.2
HMGB1P46-201ENST00000520062 RNF141Q8WVD5 230 aa7.53□□□□□ -1.2
HMGB1P46-201ENST00000520062 EZH1Q92800 747 aaPredicted RBP7.53□□□□□ -1.2
HMGB1P46-201ENST00000520062 NINJ1Q92982 152 aa7.53□□□□□ -1.2
HMGB1P46-201ENST00000520062 MFSD3Q96ES6 412 aa7.53□□□□□ -1.2
HMGB1P46-201ENST00000520062 RCC1LQ96I51 464 aaKnown RBP7.53□□□□□ -1.2
HMGB1P46-201ENST00000520062 FBXL18Q96ME1 805 aa7.53□□□□□ -1.2
HMGB1P46-201ENST00000520062 KREMEN1Q96MU8 473 aa7.53□□□□□ -1.2
HMGB1P46-201ENST00000520062 IPO9Q96P70 1041 aaKnown RBP7.53□□□□□ -1.2
HMGB1P46-201ENST00000520062 NACC1Q96RE7 527 aa7.53□□□□□ -1.2
HMGB1P46-201ENST00000520062 DHRS4Q9BTZ2 278 aa7.53□□□□□ -1.2
HMGB1P46-201ENST00000520062 LRP2BPQ9P2M1 347 aa7.53□□□□□ -1.2
HMGB1P46-201ENST00000520062 A0A087WZG4 1122 aa7.52□□□□□ -1.21
HMGB1P46-201ENST00000520062 PLD2O14939 933 aa7.52□□□□□ -1.21
HMGB1P46-201ENST00000520062 CAPNS1P04632 268 aa7.52□□□□□ -1.21
HMGB1P46-201ENST00000520062 ITGAVP06756 1048 aa7.52□□□□□ -1.21
HMGB1P46-201ENST00000520062 FGFR1P11362 822 aa7.52□□□□□ -1.21
HMGB1P46-201ENST00000520062 PPP2R2AP63151 447 aa7.52□□□□□ -1.21
HMGB1P46-201ENST00000520062 AUHQ13825 339 aaKnown RBP7.52□□□□□ -1.21
HMGB1P46-201ENST00000520062 FNDC3BQ53EP0 1204 aaKnown RBP7.52□□□□□ -1.21
HMGB1P46-201ENST00000520062 DCAF15Q66K64 600 aa7.52□□□□□ -1.21
HMGB1P46-201ENST00000520062 SHISA2Q6UWI4 295 aa7.52□□□□□ -1.21
HMGB1P46-201ENST00000520062 TREML4Q6UXN2 200 aa7.52□□□□□ -1.21
HMGB1P46-201ENST00000520062 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.52□□□□□ -1.21
HMGB1P46-201ENST00000520062 KRT26Q7Z3Y9 468 aa7.52□□□□□ -1.21
HMGB1P46-201ENST00000520062 ZNF227Q86WZ6 799 aa7.52□□□□□ -1.21
HMGB1P46-201ENST00000520062 SCUBE1Q8IWY4 988 aa7.52□□□□□ -1.21
HMGB1P46-201ENST00000520062 CRACR2BQ8N4Y2 399 aaPredicted RBP7.52□□□□□ -1.21
HMGB1P46-201ENST00000520062 XAGE3Q8WTP9 111 aa7.52□□□□□ -1.21
HMGB1P46-201ENST00000520062 FAM46AQ96IP4 442 aaKnown RBP7.52□□□□□ -1.21
HMGB1P46-201ENST00000520062 EXOC2Q96KP1 924 aa7.52□□□□□ -1.21
HMGB1P46-201ENST00000520062 PSMG3-AS1Q96PY0 264 aa7.52□□□□□ -1.21
HMGB1P46-201ENST00000520062 CDC6Q99741 560 aa7.52□□□□□ -1.21
HMGB1P46-201ENST00000520062 MIPEPQ99797 713 aa7.52□□□□□ -1.21
HMGB1P46-201ENST00000520062 SEMA6CQ9H3T2 930 aa7.52□□□□□ -1.21
HMGB1P46-201ENST00000520062 NCOA5Q9HCD5 579 aaKnown RBP7.52□□□□□ -1.21
HMGB1P46-201ENST00000520062 FAM86C1Q9NVL1 165 aa7.52□□□□□ -1.21
HMGB1P46-201ENST00000520062 PRR13Q9NZ81 148 aa7.52□□□□□ -1.21
HMGB1P46-201ENST00000520062 APEX2Q9UBZ4 518 aa7.52□□□□□ -1.21
HMGB1P46-201ENST00000520062 USP21Q9UK80 565 aa7.52□□□□□ -1.21
HMGB1P46-201ENST00000520062 DNAJC25-GNG10A0A024R161 153 aa7.51□□□□□ -1.21
HMGB1P46-201ENST00000520062 C9orf172C9J069 976 aa7.51□□□□□ -1.21
HMGB1P46-201ENST00000520062 SHOXO15266 292 aa7.51□□□□□ -1.21
HMGB1P46-201ENST00000520062 RAB6AP20340 208 aa7.51□□□□□ -1.21
HMGB1P46-201ENST00000520062 CD247P20963 164 aa7.51□□□□□ -1.21
HMGB1P46-201ENST00000520062 MAP7Q14244 749 aa7.51□□□□□ -1.21
HMGB1P46-201ENST00000520062 GRIK4Q16099 956 aa7.51□□□□□ -1.21
HMGB1P46-201ENST00000520062 TM4SF20Q53R12 229 aa7.51□□□□□ -1.21
HMGB1P46-201ENST00000520062 FOXB2Q5VYV0 432 aa7.51□□□□□ -1.21
HMGB1P46-201ENST00000520062 POMZP3Q6PJE2 187 aa7.51□□□□□ -1.21
HMGB1P46-201ENST00000520062 NIM1KQ8IY84 436 aa7.51□□□□□ -1.21
HMGB1P46-201ENST00000520062 BEND7Q8N7W2 519 aaPredicted RBP7.51□□□□□ -1.21
HMGB1P46-201ENST00000520062 LRRN4CLQ8ND94 238 aa7.51□□□□□ -1.21
HMGB1P46-201ENST00000520062 BVESQ8NE79 360 aa7.51□□□□□ -1.21
HMGB1P46-201ENST00000520062 COX4I2Q96KJ9 171 aa7.51□□□□□ -1.21
HMGB1P46-201ENST00000520062 ZNF512BQ96KM6 892 aaPredicted RBP7.51□□□□□ -1.21
HMGB1P46-201ENST00000520062 MRPS23Q9Y3D9 190 aaKnown RBP7.51□□□□□ -1.21
HMGB1P46-201ENST00000520062 DAGLAQ9Y4D2 1042 aa7.51□□□□□ -1.21
HMGB1P46-201ENST00000520062 ZNF451Q9Y4E5 1061 aa7.51□□□□□ -1.21
HMGB1P46-201ENST00000520062 TRBV23-1A0A0A0MS06 115 aa7.5□□□□□ -1.21
HMGB1P46-201ENST00000520062 NOP56O00567 594 aaKnown RBP7.5□□□□□ -1.21
HMGB1P46-201ENST00000520062 SLITRK5O94991 958 aa7.5□□□□□ -1.21
HMGB1P46-201ENST00000520062 ALX3O95076 343 aa7.5□□□□□ -1.21
HMGB1P46-201ENST00000520062 ITGA4P13612 1032 aa7.5□□□□□ -1.21
HMGB1P46-201ENST00000520062 GLB1P16278 677 aa7.5□□□□□ -1.21
HMGB1P46-201ENST00000520062 SUMO1P63165 101 aaKnown RBP7.5□□□□□ -1.21
HMGB1P46-201ENST00000520062 AMPD3Q01432 767 aa7.5□□□□□ -1.21
HMGB1P46-201ENST00000520062 PABPC4Q13310 644 aaKnown RBP eCLIP7.5□□□□□ -1.21
HMGB1P46-201ENST00000520062 LCE2AQ5TA79 106 aaPredicted RBP7.5□□□□□ -1.21
HMGB1P46-201ENST00000520062 CDPF1Q6NVV7 123 aa7.5□□□□□ -1.21
HMGB1P46-201ENST00000520062 ADAT2Q7Z6V5 191 aaKnown RBP7.5□□□□□ -1.21
HMGB1P46-201ENST00000520062 FGD4Q96M96 766 aa7.5□□□□□ -1.21
HMGB1P46-201ENST00000520062 MRPL4Q9BYD3 311 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms