RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 SBNO1A3KN83 1393 aa9.6□□□□□ -0.87
CSMD1-206ENST00000520002 NUDCD3Q8IVD9 361 aa9.59□□□□□ -0.87
CSMD1-206ENST00000520002 LRRC59Q96AG4 307 aaKnown RBP9.59□□□□□ -0.87
CSMD1-206ENST00000520002 UIMC1Q96RL1 719 aa9.59□□□□□ -0.87
CSMD1-206ENST00000520002 ZBTB40Q9NUA8 1239 aa9.59□□□□□ -0.87
CSMD1-206ENST00000520002 FLT4P35916 1363 aa9.59□□□□□ -0.87
CSMD1-206ENST00000520002 NPATQ14207 1427 aa9.59□□□□□ -0.87
CSMD1-206ENST00000520002 B4DLN1 442 aa9.59□□□□□ -0.87
CSMD1-206ENST00000520002 STX10O60499 249 aa9.59□□□□□ -0.87
CSMD1-206ENST00000520002 MRPL12P52815 198 aaKnown RBP9.59□□□□□ -0.87
CSMD1-206ENST00000520002 TBC1D8BQ0IIM8 1120 aa9.59□□□□□ -0.87
CSMD1-206ENST00000520002 CAPRIN2Q6IMN6 1127 aaKnown RBP9.59□□□□□ -0.87
CSMD1-206ENST00000520002 PHACTR3Q96KR7 559 aa9.59□□□□□ -0.87
CSMD1-206ENST00000520002 SAR1BQ9Y6B6 198 aa9.59□□□□□ -0.87
CSMD1-206ENST00000520002 DYTNA2CJ06 578 aa9.59□□□□□ -0.87
CSMD1-206ENST00000520002 HAUS7Q99871 368 aa9.59□□□□□ -0.87
CSMD1-206ENST00000520002 MGEA5O60502 916 aa9.59□□□□□ -0.87
CSMD1-206ENST00000520002 PIK3AP1Q6ZUJ8 805 aa9.59□□□□□ -0.87
CSMD1-206ENST00000520002 PCYT1AP49585 367 aa9.59□□□□□ -0.87
CSMD1-206ENST00000520002 AKAP4Q5JQC9 854 aa9.59□□□□□ -0.87
CSMD1-206ENST00000520002 THEGQ9P2T0 379 aa9.59□□□□□ -0.87
CSMD1-206ENST00000520002 MAST1Q9Y2H9 1570 aa9.59□□□□□ -0.87
CSMD1-206ENST00000520002 TRPM2O94759 1503 aa9.59□□□□□ -0.87
CSMD1-206ENST00000520002 MAP3K7O43318 606 aa9.59□□□□□ -0.87
CSMD1-206ENST00000520002 DZIP3Q86Y13 1208 aaKnown RBP9.59□□□□□ -0.87
CSMD1-206ENST00000520002 PLCH2O75038 1416 aa9.59□□□□□ -0.87
CSMD1-206ENST00000520002 GPATCH8Q9UKJ3 1502 aaKnown RBP9.59□□□□□ -0.87
CSMD1-206ENST00000520002 KRT15P19012 456 aa9.59□□□□□ -0.87
CSMD1-206ENST00000520002 TRIM14Q14142 442 aa9.59□□□□□ -0.87
CSMD1-206ENST00000520002 TAF12Q16514 161 aa9.59□□□□□ -0.87
CSMD1-206ENST00000520002 CCT6BQ92526 530 aa9.59□□□□□ -0.87
CSMD1-206ENST00000520002 MTHFSDQ2M296 383 aaKnown RBP9.59□□□□□ -0.87
CSMD1-206ENST00000520002 ATL3Q6DD88 541 aa9.59□□□□□ -0.87
CSMD1-206ENST00000520002 NCAPGQ9BPX3 1015 aa9.59□□□□□ -0.87
CSMD1-206ENST00000520002 APOEP02649 317 aa9.58□□□□□ -0.88
CSMD1-206ENST00000520002 SMTNP53814 917 aa9.58□□□□□ -0.88
CSMD1-206ENST00000520002 PKP1Q13835 747 aa9.58□□□□□ -0.88
CSMD1-206ENST00000520002 CFAP221Q4G0U5 840 aa9.58□□□□□ -0.88
CSMD1-206ENST00000520002 NYXQ9GZU5 481 aa9.58□□□□□ -0.88
CSMD1-206ENST00000520002 CD2APQ9Y5K6 639 aa9.58□□□□□ -0.88
CSMD1-206ENST00000520002 TNRQ92752 1358 aa9.58□□□□□ -0.88
CSMD1-206ENST00000520002 EIF4G3O43432 1585 aaKnown RBP9.58□□□□□ -0.88
CSMD1-206ENST00000520002 ANKRD20A3Q5VUR7 823 aa9.58□□□□□ -0.88
CSMD1-206ENST00000520002 SLC27A2O14975 620 aa9.58□□□□□ -0.88
CSMD1-206ENST00000520002 RIMBP2O15034 1052 aa9.58□□□□□ -0.88
CSMD1-206ENST00000520002 PLCD1P51178 756 aa9.58□□□□□ -0.88
CSMD1-206ENST00000520002 ASIC2Q16515 512 aa9.58□□□□□ -0.88
CSMD1-206ENST00000520002 ARMC2Q8NEN0 867 aa9.58□□□□□ -0.88
CSMD1-206ENST00000520002 PRPF31Q8WWY3 499 aaKnown RBP9.58□□□□□ -0.88
CSMD1-206ENST00000520002 C16orf87Q6PH81 154 aa9.58□□□□□ -0.88
CSMD1-206ENST00000520002 RCN2Q14257 317 aa9.58□□□□□ -0.88
CSMD1-206ENST00000520002 CSGALNACT2Q8N6G5 542 aa9.58□□□□□ -0.88
CSMD1-206ENST00000520002 CSRNP2Q9H175 543 aa9.58□□□□□ -0.88
CSMD1-206ENST00000520002 EIF6P56537 245 aaKnown RBP9.58□□□□□ -0.88
CSMD1-206ENST00000520002 GRAMD4Q6IC98 578 aa9.58□□□□□ -0.88
CSMD1-206ENST00000520002 CDC37L1Q7L3B6 337 aa9.58□□□□□ -0.88
CSMD1-206ENST00000520002 PDZD8Q8NEN9 1154 aa9.58□□□□□ -0.88
CSMD1-206ENST00000520002 CCDC169A6NNP5 214 aa9.58□□□□□ -0.88
CSMD1-206ENST00000520002 HNRNPCP07910 306 aaKnown RBP eCLIP9.58□□□□□ -0.88
CSMD1-206ENST00000520002 VWA3BQ502W6 1294 aa9.58□□□□□ -0.88
CSMD1-206ENST00000520002 RABGGTAQ92696 567 aa9.58□□□□□ -0.88
CSMD1-206ENST00000520002 IFIH1Q9BYX4 1025 aaKnown RBP9.58□□□□□ -0.88
CSMD1-206ENST00000520002 ANGEL1Q9UNK9 670 aaKnown RBP9.58□□□□□ -0.88
CSMD1-206ENST00000520002 POLR3AO14802 1390 aaPredicted RBP9.58□□□□□ -0.88
CSMD1-206ENST00000520002 ZBBXA8MT70 800 aa9.58□□□□□ -0.88
CSMD1-206ENST00000520002 FBXO41Q8TF61 875 aa9.58□□□□□ -0.88
CSMD1-206ENST00000520002 TBC1D8O95759 1140 aa9.58□□□□□ -0.88
CSMD1-206ENST00000520002 ADAT2Q7Z6V5 191 aaKnown RBP9.58□□□□□ -0.88
CSMD1-206ENST00000520002 LRRC8AQ8IWT6 810 aa9.58□□□□□ -0.88
CSMD1-206ENST00000520002 ITIH3Q06033 890 aa9.57□□□□□ -0.88
CSMD1-206ENST00000520002 PPP2R5DQ14738 602 aa9.57□□□□□ -0.88
CSMD1-206ENST00000520002 FCHSD1Q86WN1 690 aa9.57□□□□□ -0.88
CSMD1-206ENST00000520002 FGD4Q96M96 766 aa9.57□□□□□ -0.88
CSMD1-206ENST00000520002 SKOR1P84550 965 aa9.57□□□□□ -0.88
CSMD1-206ENST00000520002 TSPY1Q01534 308 aa9.57□□□□□ -0.88
CSMD1-206ENST00000520002 PDE4DQ08499 809 aa9.57□□□□□ -0.88
CSMD1-206ENST00000520002 PAK1Q13153 545 aa9.57□□□□□ -0.88
CSMD1-206ENST00000520002 PTPN21Q16825 1174 aa9.57□□□□□ -0.88
CSMD1-206ENST00000520002 VPS37BQ9H9H4 285 aa9.57□□□□□ -0.88
CSMD1-206ENST00000520002 ZNF202O95125 648 aa9.57□□□□□ -0.88
CSMD1-206ENST00000520002 ZFXP17010 805 aaPredicted RBP9.57□□□□□ -0.88
CSMD1-206ENST00000520002 RILPL1Q5EBL4 403 aa9.57□□□□□ -0.88
CSMD1-206ENST00000520002 RBM26Q5T8P6 1007 aaKnown RBP9.57□□□□□ -0.88
CSMD1-206ENST00000520002 MYO1EQ12965 1108 aa9.57□□□□□ -0.88
CSMD1-206ENST00000520002 PHKBQ93100 1093 aa9.57□□□□□ -0.88
CSMD1-206ENST00000520002 C8orf37Q96NL8 207 aa9.57□□□□□ -0.88
CSMD1-206ENST00000520002 BIN2Q9UBW5 565 aaPredicted RBP9.57□□□□□ -0.88
CSMD1-206ENST00000520002 NSFL1CQ9UNZ2 370 aaKnown RBP9.57□□□□□ -0.88
CSMD1-206ENST00000520002 SUN1O94901 812 aa9.57□□□□□ -0.88
CSMD1-206ENST00000520002 TNFAIP3P21580 790 aa9.57□□□□□ -0.88
CSMD1-206ENST00000520002 LIN9Q5TKA1 542 aa9.57□□□□□ -0.88
CSMD1-206ENST00000520002 NUP160Q12769 1436 aa9.57□□□□□ -0.88
CSMD1-206ENST00000520002 TROVE2P10155 538 aaKnown RBP eCLIP9.57□□□□□ -0.88
CSMD1-206ENST00000520002 TYW1BQ6NUM6 668 aa9.57□□□□□ -0.88
CSMD1-206ENST00000520002 FNBP1Q96RU3 617 aa9.57□□□□□ -0.88
CSMD1-206ENST00000520002 OSBPL1AQ9BXW6 950 aa9.57□□□□□ -0.88
CSMD1-206ENST00000520002 CADPS2Q86UW7 1296 aa9.57□□□□□ -0.88
CSMD1-206ENST00000520002 TMTC1Q8IUR5 882 aa9.57□□□□□ -0.88
CSMD1-206ENST00000520002 STK10O94804 968 aaKnown RBP9.56□□□□□ -0.88
CSMD1-206ENST00000520002 FBXO18Q8NFZ0 1043 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms