RNA–Protein interactions for RNA: ENST00000519770.1

IGHV3-52-201, Transcript of immunoglobulin heavy variable 3-52 (pseudogene), humanhuman

BASIC

Gene IGHV3-52, Length 353 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-52-201ENST00000519770 FANCBQ8NB91 859 aa20.48■□□□□ 0.87
IGHV3-52-201ENST00000519770 GTF3C6Q969F1 213 aa20.48■□□□□ 0.87
IGHV3-52-201ENST00000519770 MAP3K14Q99558 947 aa20.48■□□□□ 0.87
IGHV3-52-201ENST00000519770 GBA2Q9HCG7 927 aaPredicted RBP20.48■□□□□ 0.87
IGHV3-52-201ENST00000519770 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.48■□□□□ 0.87
IGHV3-52-201ENST00000519770 UTRNP46939 3433 aa20.48■□□□□ 0.87
IGHV3-52-201ENST00000519770 PARP1P09874 1014 aaKnown RBP20.47■□□□□ 0.87
IGHV3-52-201ENST00000519770 MAP3K11Q16584 847 aa20.47■□□□□ 0.87
IGHV3-52-201ENST00000519770 RAB11FIP4Q86YS3 637 aa20.47■□□□□ 0.87
IGHV3-52-201ENST00000519770 CLEC10AQ8IUN9 316 aa20.47■□□□□ 0.87
IGHV3-52-201ENST00000519770 CCDC144CPQ8IYA2 1237 aa20.47■□□□□ 0.87
IGHV3-52-201ENST00000519770 MYL10Q9BUA6 226 aa20.47■□□□□ 0.87
IGHV3-52-201ENST00000519770 FZD1Q9UP38 647 aa20.47■□□□□ 0.87
IGHV3-52-201ENST00000519770 KIF3AQ9Y496 699 aa20.47■□□□□ 0.87
IGHV3-52-201ENST00000519770 LARGE1O95461 756 aa20.46■□□□□ 0.87
IGHV3-52-201ENST00000519770 PTPRAP18433 802 aa20.46■□□□□ 0.87
IGHV3-52-201ENST00000519770 USP14P54578 494 aa20.46■□□□□ 0.87
IGHV3-52-201ENST00000519770 JAG1P78504 1218 aa20.46■□□□□ 0.87
IGHV3-52-201ENST00000519770 CUL4AQ13619 759 aa20.46■□□□□ 0.87
IGHV3-52-201ENST00000519770 SHROOM1Q2M3G4 852 aaPredicted RBP20.46■□□□□ 0.87
IGHV3-52-201ENST00000519770 INTS4Q96HW7 963 aaKnown RBP20.46■□□□□ 0.87
IGHV3-52-201ENST00000519770 LZTS2Q9BRK4 669 aa20.46■□□□□ 0.87
IGHV3-52-201ENST00000519770 LLPHQ9BRT6 129 aaKnown RBP20.46■□□□□ 0.87
IGHV3-52-201ENST00000519770 SMC3Q9UQE7 1217 aa20.46■□□□□ 0.87
IGHV3-52-201ENST00000519770 TOMM70O94826 608 aa20.45■□□□□ 0.86
IGHV3-52-201ENST00000519770 RXRAP19793 462 aa20.45■□□□□ 0.86
IGHV3-52-201ENST00000519770 AKAP17AQ02040 695 aaKnown RBP20.45■□□□□ 0.86
IGHV3-52-201ENST00000519770 SCRN1Q12765 414 aa20.45■□□□□ 0.86
IGHV3-52-201ENST00000519770 TROAPQ12815 778 aa20.45■□□□□ 0.86
IGHV3-52-201ENST00000519770 VGLL4Q14135 290 aa20.45■□□□□ 0.86
IGHV3-52-201ENST00000519770 CCDC96Q2M329 555 aa20.45■□□□□ 0.86
IGHV3-52-201ENST00000519770 ASPRV1Q53RT3 343 aa20.45■□□□□ 0.86
IGHV3-52-201ENST00000519770 SLFN13Q68D06 897 aa20.45■□□□□ 0.86
IGHV3-52-201ENST00000519770 ZNF280CQ8ND82 737 aa20.45■□□□□ 0.86
IGHV3-52-201ENST00000519770 DCAF4Q8WV16 495 aa20.45■□□□□ 0.86
IGHV3-52-201ENST00000519770 SLC10A4Q96EP9 437 aa20.45■□□□□ 0.86
IGHV3-52-201ENST00000519770 WDR18Q9BV38 432 aa20.45■□□□□ 0.86
IGHV3-52-201ENST00000519770 TMX2Q9Y320 296 aa20.45■□□□□ 0.86
IGHV3-52-201ENST00000519770 ZHX2Q9Y6X8 837 aa20.45■□□□□ 0.86
IGHV3-52-201ENST00000519770 GREB1LQ9C091 1923 aaPredicted RBP20.45■□□□□ 0.86
IGHV3-52-201ENST00000519770 DOCK1Q14185 1865 aa20.44■□□□□ 0.86
IGHV3-52-201ENST00000519770 USP17L10C9JJH3 530 aa20.44■□□□□ 0.86
IGHV3-52-201ENST00000519770 F5H6K3 240 aa20.44■□□□□ 0.86
IGHV3-52-201ENST00000519770 UBE2Q2LH0YL09 131 aa20.44■□□□□ 0.86
IGHV3-52-201ENST00000519770 KIF3CO14782 793 aa20.44■□□□□ 0.86
IGHV3-52-201ENST00000519770 SLC1A4P43007 532 aa20.44■□□□□ 0.86
IGHV3-52-201ENST00000519770 SLC4A3P48751 1232 aa20.44■□□□□ 0.86
IGHV3-52-201ENST00000519770 KLRC3Q07444 240 aa20.44■□□□□ 0.86
IGHV3-52-201ENST00000519770 GRM4Q14833 912 aa20.44■□□□□ 0.86
IGHV3-52-201ENST00000519770 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.44■□□□□ 0.86
IGHV3-52-201ENST00000519770 ERO1BQ86YB8 467 aa20.44■□□□□ 0.86
IGHV3-52-201ENST00000519770 TRIM22Q8IYM9 498 aa20.44■□□□□ 0.86
IGHV3-52-201ENST00000519770 SPRYD3Q8NCJ5 442 aa20.44■□□□□ 0.86
IGHV3-52-201ENST00000519770 GMCL1P1Q8NEA9 526 aa20.44■□□□□ 0.86
IGHV3-52-201ENST00000519770 RBM46Q8TBY0 533 aaKnown RBP20.44■□□□□ 0.86
IGHV3-52-201ENST00000519770 HPS5Q9UPZ3 1129 aa20.44■□□□□ 0.86
IGHV3-52-201ENST00000519770 ATAD5Q96QE3 1844 aa20.43■□□□□ 0.86
IGHV3-52-201ENST00000519770 C19orf81C9J6K1 198 aa20.43■□□□□ 0.86
IGHV3-52-201ENST00000519770 ITGBL1O95965 494 aaPredicted RBP20.43■□□□□ 0.86
IGHV3-52-201ENST00000519770 HMGN5P82970 282 aaKnown RBP20.43■□□□□ 0.86
IGHV3-52-201ENST00000519770 GPATCH4Q5T3I0 446 aaKnown RBP20.43■□□□□ 0.86
IGHV3-52-201ENST00000519770 FAM184AQ8NB25 1140 aa20.43■□□□□ 0.86
IGHV3-52-201ENST00000519770 ELP3Q9H9T3 547 aa20.43■□□□□ 0.86
IGHV3-52-201ENST00000519770 NCOA5Q9HCD5 579 aaKnown RBP20.43■□□□□ 0.86
IGHV3-52-201ENST00000519770 CWC22Q9HCG8 908 aaKnown RBP20.43■□□□□ 0.86
IGHV3-52-201ENST00000519770 FOXD4L1Q9NU39 408 aa20.43■□□□□ 0.86
IGHV3-52-201ENST00000519770 MYH4Q9Y623 1939 aa20.43■□□□□ 0.86
IGHV3-52-201ENST00000519770 PAPPA2Q9BXP8 1791 aa20.42■□□□□ 0.86
IGHV3-52-201ENST00000519770 PDHBP11177 359 aa20.42■□□□□ 0.86
IGHV3-52-201ENST00000519770 PPATQ06203 517 aa20.42■□□□□ 0.86
IGHV3-52-201ENST00000519770 SSRP1Q08945 709 aaKnown RBP20.42■□□□□ 0.86
IGHV3-52-201ENST00000519770 SPP2Q13103 211 aa20.42■□□□□ 0.86
IGHV3-52-201ENST00000519770 USP17L2Q6R6M4 530 aa20.42■□□□□ 0.86
IGHV3-52-201ENST00000519770 MOB2Q70IA6 237 aa20.42■□□□□ 0.86
IGHV3-52-201ENST00000519770 SIAH1Q8IUQ4 282 aa20.42■□□□□ 0.86
IGHV3-52-201ENST00000519770 ACER1Q8TDN7 264 aa20.42■□□□□ 0.86
IGHV3-52-201ENST00000519770 LPAR1Q92633 364 aa20.42■□□□□ 0.86
IGHV3-52-201ENST00000519770 KIAA1683Q9H0B3 1180 aa20.42■□□□□ 0.86
IGHV3-52-201ENST00000519770 VCPKMTQ9H867 229 aa20.42■□□□□ 0.86
IGHV3-52-201ENST00000519770 TMOD4Q9NZQ9 345 aa20.42■□□□□ 0.86
IGHV3-52-201ENST00000519770 SNCAIPQ9Y6H5 919 aa20.42■□□□□ 0.86
IGHV3-52-201ENST00000519770 NID2Q14112 1375 aa20.42■□□□□ 0.86
IGHV3-52-201ENST00000519770 ADD1P35611 737 aaKnown RBP20.41■□□□□ 0.86
IGHV3-52-201ENST00000519770 ECE1P42892 770 aa20.41■□□□□ 0.86
IGHV3-52-201ENST00000519770 IKQ13123 557 aaPredicted RBP20.41■□□□□ 0.86
IGHV3-52-201ENST00000519770 ZYXQ15942 572 aaKnown RBP20.41■□□□□ 0.86
IGHV3-52-201ENST00000519770 LDLRAD1Q5T700 205 aa20.41■□□□□ 0.86
IGHV3-52-201ENST00000519770 CCDC84Q86UT8 332 aaPredicted RBP20.41■□□□□ 0.86
IGHV3-52-201ENST00000519770 GMCL1Q96IK5 515 aa20.41■□□□□ 0.86
IGHV3-52-201ENST00000519770 RBM27Q9P2N5 1060 aaKnown RBP20.41■□□□□ 0.86
IGHV3-52-201ENST00000519770 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.41■□□□□ 0.86
IGHV3-52-201ENST00000519770 A0A1W2PRG0 241 aa20.4■□□□□ 0.86
IGHV3-52-201ENST00000519770 TRIM75PA6NK02 468 aa20.4■□□□□ 0.86
IGHV3-52-201ENST00000519770 KLRF2D3W0D1 207 aa20.4■□□□□ 0.86
IGHV3-52-201ENST00000519770 NDUFB10O96000 172 aa20.4■□□□□ 0.86
IGHV3-52-201ENST00000519770 BMP3P12645 472 aa20.4■□□□□ 0.86
IGHV3-52-201ENST00000519770 CDC27P30260 824 aa20.4■□□□□ 0.86
IGHV3-52-201ENST00000519770 BACE1P56817 501 aa20.4■□□□□ 0.86
IGHV3-52-201ENST00000519770 FMR1Q06787 632 aaKnown RBP eCLIP20.4■□□□□ 0.86
IGHV3-52-201ENST00000519770 FSTL1Q12841 308 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms