RNA–Protein interactions for RNA: ENST00000519768.5

CTNNA1-218, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-218ENST00000519768 CABP4P57796 275 aa6.66□□□□□ -1.34
CTNNA1-218ENST00000519768 ZSCAN29Q8IWY8 852 aaPredicted RBP6.66□□□□□ -1.34
CTNNA1-218ENST00000519768 SNX29Q8TEQ0 813 aa6.66□□□□□ -1.34
CTNNA1-218ENST00000519768 ALKBH8Q96BT7 664 aaKnown RBP6.66□□□□□ -1.34
CTNNA1-218ENST00000519768 BTBD6Q96KE9 485 aa6.66□□□□□ -1.34
CTNNA1-218ENST00000519768 BRIP1Q9BX63 1249 aa6.66□□□□□ -1.34
CTNNA1-218ENST00000519768 IGFLR1Q9H665 355 aa6.66□□□□□ -1.34
CTNNA1-218ENST00000519768 LGR6Q9HBX8 967 aa6.66□□□□□ -1.34
CTNNA1-218ENST00000519768 RNF186Q9NXI6 227 aa6.66□□□□□ -1.34
CTNNA1-218ENST00000519768 SLC6A14Q9UN76 642 aa6.66□□□□□ -1.34
CTNNA1-218ENST00000519768 ROCK2O75116 1388 aaKnown RBP6.66□□□□□ -1.34
CTNNA1-218ENST00000519768 CANXP27824 592 aaKnown RBP6.65□□□□□ -1.34
CTNNA1-218ENST00000519768 KIF23Q02241 960 aaPredicted RBP6.65□□□□□ -1.34
CTNNA1-218ENST00000519768 EIF4A2Q14240 407 aaKnown RBP6.65□□□□□ -1.34
CTNNA1-218ENST00000519768 CHSY3Q70JA7 882 aa6.65□□□□□ -1.34
CTNNA1-218ENST00000519768 TMC7Q7Z402 723 aa6.65□□□□□ -1.34
CTNNA1-218ENST00000519768 PNMA8AQ86V59 439 aaPredicted RBP6.65□□□□□ -1.34
CTNNA1-218ENST00000519768 ASB16Q96NS5 453 aa6.65□□□□□ -1.34
CTNNA1-218ENST00000519768 TESK2Q96S53 571 aa6.65□□□□□ -1.34
CTNNA1-218ENST00000519768 ZNF408Q9H9D4 720 aa6.65□□□□□ -1.34
CTNNA1-218ENST00000519768 CNTN3Q9P232 1028 aa6.65□□□□□ -1.34
CTNNA1-218ENST00000519768 UNC80Q8N2C7 3258 aa6.65□□□□□ -1.34
CTNNA1-218ENST00000519768 POLR2AP24928 1970 aaKnown RBP6.65□□□□□ -1.34
CTNNA1-218ENST00000519768 VCANP13611 3396 aa6.65□□□□□ -1.35
CTNNA1-218ENST00000519768 FLT4P35916 1363 aa6.65□□□□□ -1.35
CTNNA1-218ENST00000519768 SMG6Q86US8 1419 aaKnown RBP6.65□□□□□ -1.35
CTNNA1-218ENST00000519768 SPTBN5Q9NRC6 3674 aaKnown RBP6.64□□□□□ -1.35
CTNNA1-218ENST00000519768 LAMA3Q16787 3333 aa6.64□□□□□ -1.35
CTNNA1-218ENST00000519768 BTBD11A6QL63 1104 aa6.64□□□□□ -1.35
CTNNA1-218ENST00000519768 PHF20L1A8MW92 1017 aa6.64□□□□□ -1.35
CTNNA1-218ENST00000519768 KIF4AO95239 1232 aa6.64□□□□□ -1.35
CTNNA1-218ENST00000519768 TBC1D8BQ0IIM8 1120 aa6.64□□□□□ -1.35
CTNNA1-218ENST00000519768 HYAL2Q12891 473 aa6.64□□□□□ -1.35
CTNNA1-218ENST00000519768 C1orf127Q8N9H9 656 aa6.64□□□□□ -1.35
CTNNA1-218ENST00000519768 NEDD1Q8NHV4 660 aa6.64□□□□□ -1.35
CTNNA1-218ENST00000519768 CHRDQ9H2X0 955 aa6.64□□□□□ -1.35
CTNNA1-218ENST00000519768 STARD13Q9Y3M8 1113 aa6.64□□□□□ -1.35
CTNNA1-218ENST00000519768 COL15A1P39059 1388 aa6.64□□□□□ -1.35
CTNNA1-218ENST00000519768 GPR182O15218 404 aa6.63□□□□□ -1.35
CTNNA1-218ENST00000519768 TREHO43280 583 aa6.63□□□□□ -1.35
CTNNA1-218ENST00000519768 CA12O43570 354 aa6.63□□□□□ -1.35
CTNNA1-218ENST00000519768 PHACTR2O75167 634 aa6.63□□□□□ -1.35
CTNNA1-218ENST00000519768 AMPD1P23109 780 aa6.63□□□□□ -1.35
CTNNA1-218ENST00000519768 CES1P23141 567 aa6.63□□□□□ -1.35
CTNNA1-218ENST00000519768 PDE6BP35913 854 aa6.63□□□□□ -1.35
CTNNA1-218ENST00000519768 IARSP41252 1262 aaKnown RBP6.63□□□□□ -1.35
CTNNA1-218ENST00000519768 EIF5P55010 431 aaKnown RBP6.63□□□□□ -1.35
CTNNA1-218ENST00000519768 WASHC2AQ641Q2 1341 aa6.63□□□□□ -1.35
CTNNA1-218ENST00000519768 STYK1Q6J9G0 422 aa6.63□□□□□ -1.35
CTNNA1-218ENST00000519768 ZNF530Q6P9A1 599 aaPredicted RBP6.63□□□□□ -1.35
CTNNA1-218ENST00000519768 CTU1Q7Z7A3 348 aaKnown RBP6.63□□□□□ -1.35
CTNNA1-218ENST00000519768 FAM35AQ86V20 835 aa6.63□□□□□ -1.35
CTNNA1-218ENST00000519768 GPC2Q8N158 579 aa6.63□□□□□ -1.35
CTNNA1-218ENST00000519768 SLC17A8Q8NDX2 589 aa6.63□□□□□ -1.35
CTNNA1-218ENST00000519768 SNED1Q8TER0 1413 aa6.63□□□□□ -1.35
CTNNA1-218ENST00000519768 CSRNP1Q96S65 589 aa6.63□□□□□ -1.35
CTNNA1-218ENST00000519768 SPOCK3Q9BQ16 436 aa6.63□□□□□ -1.35
CTNNA1-218ENST00000519768 R3HDMLQ9H3Y0 253 aa6.63□□□□□ -1.35
CTNNA1-218ENST00000519768 FRRS1LQ9P0K9 344 aa6.63□□□□□ -1.35
CTNNA1-218ENST00000519768 POLKQ9UBT6 870 aa6.63□□□□□ -1.35
CTNNA1-218ENST00000519768 FOXD3Q9UJU5 478 aaPredicted RBP6.63□□□□□ -1.35
CTNNA1-218ENST00000519768 ST20-MTHFSA0A0A6YYL1 179 aa6.62□□□□□ -1.35
CTNNA1-218ENST00000519768 CYP2E1P05181 493 aaPredicted RBP6.62□□□□□ -1.35
CTNNA1-218ENST00000519768 HOXB4P17483 251 aaPredicted RBP6.62□□□□□ -1.35
CTNNA1-218ENST00000519768 PIP4K2AP48426 406 aaPredicted RBP6.62□□□□□ -1.35
CTNNA1-218ENST00000519768 MTHFSP49914 203 aa6.62□□□□□ -1.35
CTNNA1-218ENST00000519768 DSC3Q14574 896 aa6.62□□□□□ -1.35
CTNNA1-218ENST00000519768 CCDC27Q2M243 656 aa6.62□□□□□ -1.35
CTNNA1-218ENST00000519768 CCDC93Q567U6 631 aa6.62□□□□□ -1.35
CTNNA1-218ENST00000519768 C20orf204Q6ZNR8 217 aa6.62□□□□□ -1.35
CTNNA1-218ENST00000519768 USP48Q86UV5 1035 aa6.62□□□□□ -1.35
CTNNA1-218ENST00000519768 TTC9Q92623 222 aa6.62□□□□□ -1.35
CTNNA1-218ENST00000519768 MASTLQ96GX5 879 aa6.62□□□□□ -1.35
CTNNA1-218ENST00000519768 NIF3L1Q9GZT8 377 aa6.62□□□□□ -1.35
CTNNA1-218ENST00000519768 DNAJC25Q9H1X3 360 aa6.62□□□□□ -1.35
CTNNA1-218ENST00000519768 ZFYVE28Q9HCC9 887 aa6.62□□□□□ -1.35
CTNNA1-218ENST00000519768 PRDM6Q9NQX0 595 aa6.62□□□□□ -1.35
CTNNA1-218ENST00000519768 SALL4Q9UJQ4 1053 aa6.62□□□□□ -1.35
CTNNA1-218ENST00000519768 NAGPAQ9UK23 515 aa6.62□□□□□ -1.35
CTNNA1-218ENST00000519768 TBC1D8O95759 1140 aa6.61□□□□□ -1.35
CTNNA1-218ENST00000519768 GHRHP01286 108 aa6.61□□□□□ -1.35
CTNNA1-218ENST00000519768 DGKGP49619 791 aa6.61□□□□□ -1.35
CTNNA1-218ENST00000519768 HUNKP57058 714 aa6.61□□□□□ -1.35
CTNNA1-218ENST00000519768 PLCB3Q01970 1234 aa6.61□□□□□ -1.35
CTNNA1-218ENST00000519768 PLA2G4EQ3MJ16 856 aa6.61□□□□□ -1.35
CTNNA1-218ENST00000519768 MICALL1Q8N3F8 863 aa6.61□□□□□ -1.35
CTNNA1-218ENST00000519768 GCC1Q96CN9 775 aa6.61□□□□□ -1.35
CTNNA1-218ENST00000519768 SPACA7Q96KW9 195 aa6.61□□□□□ -1.35
CTNNA1-218ENST00000519768 NSUN5Q96P11 429 aaKnown RBP6.61□□□□□ -1.35
CTNNA1-218ENST00000519768 CARD11Q9BXL7 1154 aa6.61□□□□□ -1.35
CTNNA1-218ENST00000519768 RBSNQ9H1K0 784 aa6.61□□□□□ -1.35
CTNNA1-218ENST00000519768 PGAP2Q9UHJ9 254 aa6.61□□□□□ -1.35
CTNNA1-218ENST00000519768 ARFGEF2Q9Y6D5 1785 aa6.6□□□□□ -1.35
CTNNA1-218ENST00000519768 FAM177BA6PVY3 158 aa6.6□□□□□ -1.35
CTNNA1-218ENST00000519768 J3QW42 95 aa6.6□□□□□ -1.35
CTNNA1-218ENST00000519768 M0R082 166 aa6.6□□□□□ -1.35
CTNNA1-218ENST00000519768 TCERG1O14776 1098 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-218ENST00000519768 EREGO14944 169 aa6.6□□□□□ -1.35
CTNNA1-218ENST00000519768 CPNE3O75131 537 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-218ENST00000519768 CAMTA2O94983 1202 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms