RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 A0A087X0B3 334 aa12.85□□□□□ -0.35
NUDCD1-203ENST00000519607 FAM205CA6NFA0 338 aa12.85□□□□□ -0.35
NUDCD1-203ENST00000519607 FANCGO15287 622 aa12.85□□□□□ -0.35
NUDCD1-203ENST00000519607 TEX33O43247 280 aa12.85□□□□□ -0.35
NUDCD1-203ENST00000519607 PLEKHA8P1O95397 391 aa12.85□□□□□ -0.35
NUDCD1-203ENST00000519607 TXLNAP40222 546 aa12.85□□□□□ -0.35
NUDCD1-203ENST00000519607 NLRP5P59047 1200 aa12.85□□□□□ -0.35
NUDCD1-203ENST00000519607 KARSQ15046 597 aaKnown RBP12.85□□□□□ -0.35
NUDCD1-203ENST00000519607 TMED8Q6PL24 325 aaPredicted RBP12.85□□□□□ -0.35
NUDCD1-203ENST00000519607 CPLX3Q8WVH0 158 aa12.85□□□□□ -0.35
NUDCD1-203ENST00000519607 KIFC2Q96AC6 838 aa12.85□□□□□ -0.35
NUDCD1-203ENST00000519607 DESI2Q9BSY9 194 aa12.85□□□□□ -0.35
NUDCD1-203ENST00000519607 BSDC1Q9NW68 430 aaPredicted RBP12.85□□□□□ -0.35
NUDCD1-203ENST00000519607 LOC102724428A0A0B4J2F2 783 aa12.85□□□□□ -0.35
NUDCD1-203ENST00000519607 hCG_1642624A0A1W2PR95 340 aa12.85□□□□□ -0.35
NUDCD1-203ENST00000519607 SOWAHDA6NJG2 315 aa12.85□□□□□ -0.35
NUDCD1-203ENST00000519607 PPP1R3GB7ZBB8 358 aa12.85□□□□□ -0.35
NUDCD1-203ENST00000519607 KIF5BP33176 963 aa12.85□□□□□ -0.35
NUDCD1-203ENST00000519607 SIK1P57059 783 aa12.85□□□□□ -0.35
NUDCD1-203ENST00000519607 TRIM14Q14142 442 aa12.85□□□□□ -0.35
NUDCD1-203ENST00000519607 RSRC2Q7L4I2 434 aaKnown RBP12.85□□□□□ -0.35
NUDCD1-203ENST00000519607 TMTC1Q8IUR5 882 aa12.85□□□□□ -0.35
NUDCD1-203ENST00000519607 CEP112Q8N8E3 955 aa12.85□□□□□ -0.35
NUDCD1-203ENST00000519607 TTF2Q9UNY4 1162 aaKnown RBP12.85□□□□□ -0.35
NUDCD1-203ENST00000519607 ADGRG1Q9Y653 693 aa12.85□□□□□ -0.35
NUDCD1-203ENST00000519607 POTEB2H3BUK9 544 aa12.84□□□□□ -0.35
NUDCD1-203ENST00000519607 N4BP3O15049 544 aa12.84□□□□□ -0.35
NUDCD1-203ENST00000519607 MFAP3LO75121 409 aa12.84□□□□□ -0.35
NUDCD1-203ENST00000519607 CD44P16070 742 aaKnown RBP12.84□□□□□ -0.35
NUDCD1-203ENST00000519607 CALML3P27482 149 aa12.84□□□□□ -0.35
NUDCD1-203ENST00000519607 PBX1P40424 430 aa12.84□□□□□ -0.35
NUDCD1-203ENST00000519607 EARS2Q5JPH6 523 aaKnown RBP12.84□□□□□ -0.35
NUDCD1-203ENST00000519607 RRAGBQ5VZM2 374 aa12.84□□□□□ -0.35
NUDCD1-203ENST00000519607 CTR9Q6PD62 1173 aa12.84□□□□□ -0.35
NUDCD1-203ENST00000519607 CLEC4GQ6UXB4 293 aa12.84□□□□□ -0.35
NUDCD1-203ENST00000519607 APTXQ7Z2E3 356 aaKnown RBP12.84□□□□□ -0.35
NUDCD1-203ENST00000519607 CRNKL1Q9BZJ0 848 aaKnown RBP12.84□□□□□ -0.35
NUDCD1-203ENST00000519607 LZTFL1Q9NQ48 299 aa12.84□□□□□ -0.35
NUDCD1-203ENST00000519607 CACNA1SQ13698 1873 aa12.84□□□□□ -0.35
NUDCD1-203ENST00000519607 BCL9LQ86UU0 1499 aa12.84□□□□□ -0.35
NUDCD1-203ENST00000519607 USP17L12C9JPN9 530 aa12.83□□□□□ -0.35
NUDCD1-203ENST00000519607 USP17L21D6R901 530 aa12.83□□□□□ -0.35
NUDCD1-203ENST00000519607 ORC4O43929 436 aa12.83□□□□□ -0.35
NUDCD1-203ENST00000519607 SCG2P13521 617 aa12.83□□□□□ -0.35
NUDCD1-203ENST00000519607 DYNLL1P63167 89 aaKnown RBP12.83□□□□□ -0.35
NUDCD1-203ENST00000519607 ARL6IP4Q66PJ3 421 aaKnown RBP12.83□□□□□ -0.35
NUDCD1-203ENST00000519607 RASGRP2Q7LDG7 609 aa12.83□□□□□ -0.35
NUDCD1-203ENST00000519607 TNFRSF25Q93038 417 aa12.83□□□□□ -0.35
NUDCD1-203ENST00000519607 RWDD2AQ9UIY3 292 aa12.83□□□□□ -0.35
NUDCD1-203ENST00000519607 CTNND2Q9UQB3 1225 aa12.83□□□□□ -0.35
NUDCD1-203ENST00000519607 WNK3Q9BYP7 1800 aa12.83□□□□□ -0.36
NUDCD1-203ENST00000519607 MYH13Q9UKX3 1938 aa12.83□□□□□ -0.36
NUDCD1-203ENST00000519607 GTPBP6O43824 516 aaPredicted RBP12.83□□□□□ -0.36
NUDCD1-203ENST00000519607 CASP14P31944 242 aa12.83□□□□□ -0.36
NUDCD1-203ENST00000519607 PLA2G4AP47712 749 aa12.83□□□□□ -0.36
NUDCD1-203ENST00000519607 DDB1Q16531 1140 aa12.83□□□□□ -0.36
NUDCD1-203ENST00000519607 CC2D1AQ6P1N0 951 aaPredicted RBP12.83□□□□□ -0.36
NUDCD1-203ENST00000519607 SHISA4Q96DD7 197 aa12.83□□□□□ -0.36
NUDCD1-203ENST00000519607 MRPL44Q9H9J2 332 aaKnown RBP12.83□□□□□ -0.36
NUDCD1-203ENST00000519607 CNTNAP5Q8WYK1 1306 aa12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 CYP2D7A0A087X1C5 515 aa12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 GTF2E1P29083 439 aaPredicted RBP12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 NT5C2P49902 561 aa12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 CHMP4BP1P59074 171 aa12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 PAK1Q13153 545 aa12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 MTF1Q14872 753 aa12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 SF3B3Q15393 1217 aaKnown RBP12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 PIK3AP1Q6ZUJ8 805 aa12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 SRGAP1Q7Z6B7 1085 aa12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 PARD6BQ9BYG5 372 aa12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 ATP8A2Q9NTI2 1148 aa12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 LIMA1Q9UHB6 759 aaKnown RBP12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 CICQ96RK0 1608 aaPredicted RBP12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 MYH14Q7Z406 1995 aaKnown RBP12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 A0A1B0GUL6 1792 aa12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 CTAGE9A4FU28 777 aa12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 CCDC151A5D8V7 595 aa12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 LRRC10BA6NIK2 292 aa12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 CASP1P29466 404 aa12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 MCM7P33993 719 aa12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 LONP1P36776 959 aaKnown RBP12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 BRD3Q15059 726 aa12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 PFKFB3Q16875 520 aaPredicted RBP12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 ZNF658Q5TYW1 1059 aaPredicted RBP12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 CYP26C1Q6V0L0 522 aa12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 RAD9BQ6WBX8 426 aa12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 SMYD4Q8IYR2 804 aaPredicted RBP12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 SRBD1Q8N5C6 995 aaKnown RBP12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 FAM84BQ96KN1 310 aaPredicted RBP12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 NUP88Q99567 741 aaPredicted RBP12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 MYO1AQ9UBC5 1043 aa12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 ARPP21Q9UBL0 812 aaPredicted RBP12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 CDC23Q9UJX2 597 aa12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 BAZ2BQ9UIF8 2168 aaKnown RBP12.82□□□□□ -0.36
NUDCD1-203ENST00000519607 COL22A1Q8NFW1 1626 aaPredicted RBP12.81□□□□□ -0.36
NUDCD1-203ENST00000519607 CCDC88AQ3V6T2 1871 aa12.81□□□□□ -0.36
NUDCD1-203ENST00000519607 TSPY2A6NKD2 308 aa12.81□□□□□ -0.36
NUDCD1-203ENST00000519607 CCT6AP40227 531 aaKnown RBP12.81□□□□□ -0.36
NUDCD1-203ENST00000519607 GPS2Q13227 327 aa12.81□□□□□ -0.36
NUDCD1-203ENST00000519607 E2F4Q16254 413 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms