RNA–Protein interactions for RNA: ENST00000519534.1

CHTF8-206, Transcript of chromosome transmission fidelity factor 8, human

TSL 2

Gene CHTF8, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHTF8-206	ENST00000519534	MS4A4A	Q96JQ5	239 aa		12.68	□□□□□ -0.38
CHTF8-206	ENST00000519534	VCPKMT	Q9H867	229 aa		12.68	□□□□□ -0.38
CHTF8-206	ENST00000519534	GOPC	Q9HD26	462 aa		12.68	□□□□□ -0.38
CHTF8-206	ENST00000519534	ZCCHC17	Q9NP64	241 aa	Known RBP	12.68	□□□□□ -0.38
CHTF8-206	ENST00000519534	STX8	Q9UNK0	236 aa		12.68	□□□□□ -0.38
CHTF8-206	ENST00000519534	SLC45A1	Q9Y2W3	748 aa		12.68	□□□□□ -0.38
CHTF8-206	ENST00000519534	TNKS	O95271	1327 aa		12.67	□□□□□ -0.38
CHTF8-206	ENST00000519534		A0A1W2PRG0	241 aa		12.67	□□□□□ -0.38
CHTF8-206	ENST00000519534		F5H6K3	240 aa		12.67	□□□□□ -0.38
CHTF8-206	ENST00000519534	SH2B2	O14492	632 aa	Predicted RBP	12.67	□□□□□ -0.38
CHTF8-206	ENST00000519534	PLA2G6	O60733	806 aa		12.67	□□□□□ -0.38
CHTF8-206	ENST00000519534	HOXA7	P31268	230 aa	Predicted RBP	12.67	□□□□□ -0.38
CHTF8-206	ENST00000519534	TM4SF4	P48230	202 aa		12.67	□□□□□ -0.38
CHTF8-206	ENST00000519534	KLRC3	Q07444	240 aa		12.67	□□□□□ -0.38
CHTF8-206	ENST00000519534	WTAP	Q15007	396 aa		12.67	□□□□□ -0.38
CHTF8-206	ENST00000519534	TMEM67	Q5HYA8	995 aa		12.67	□□□□□ -0.38
CHTF8-206	ENST00000519534	NKX2-3	Q8TAU0	364 aa		12.67	□□□□□ -0.38
CHTF8-206	ENST00000519534	OTUD5	Q96G74	571 aa		12.67	□□□□□ -0.38
CHTF8-206	ENST00000519534	GMCL1	Q96IK5	515 aa		12.67	□□□□□ -0.38
CHTF8-206	ENST00000519534	TMEM47	Q9BQJ4	181 aa		12.67	□□□□□ -0.38
CHTF8-206	ENST00000519534	KAT14	Q9H8E8	782 aa		12.67	□□□□□ -0.38
CHTF8-206	ENST00000519534	NMT2	O60551	498 aa		12.66	□□□□□ -0.38
CHTF8-206	ENST00000519534	CALM1	P0DP23	149 aa		12.66	□□□□□ -0.38
CHTF8-206	ENST00000519534	CALM2	P0DP24	149 aa		12.66	□□□□□ -0.38
CHTF8-206	ENST00000519534	CALM3	P0DP25	149 aa		12.66	□□□□□ -0.38
CHTF8-206	ENST00000519534	SNHG28	P0DPA3	235 aa		12.66	□□□□□ -0.38
CHTF8-206	ENST00000519534	GJA5	P36382	358 aa		12.66	□□□□□ -0.38
CHTF8-206	ENST00000519534	MCM2	P49736	904 aa		12.66	□□□□□ -0.38
CHTF8-206	ENST00000519534	SREBF2	Q12772	1141 aa		12.66	□□□□□ -0.38
CHTF8-206	ENST00000519534	PABPC4	Q13310	644 aa	Known RBP eCLIP	12.66	□□□□□ -0.38	3e-9	■■■□□ 18.4
CHTF8-206	ENST00000519534	SHROOM1	Q2M3G4	852 aa	Predicted RBP	12.66	□□□□□ -0.38
CHTF8-206	ENST00000519534	ACER1	Q8TDN7	264 aa		12.66	□□□□□ -0.38
CHTF8-206	ENST00000519534	CHMP4C	Q96CF2	233 aa		12.66	□□□□□ -0.38
CHTF8-206	ENST00000519534	ZNF274	Q96GC6	653 aa	Predicted RBP	12.66	□□□□□ -0.38
CHTF8-206	ENST00000519534	LY9	Q9HBG7	655 aa		12.66	□□□□□ -0.38
CHTF8-206	ENST00000519534	PDRG1	Q9NUG6	133 aa		12.66	□□□□□ -0.38
CHTF8-206	ENST00000519534	TMOD4	Q9NZQ9	345 aa		12.66	□□□□□ -0.38
CHTF8-206	ENST00000519534	SIPA1L1	O43166	1804 aa		12.66	□□□□□ -0.38
CHTF8-206	ENST00000519534	BAZ2A	Q9UIF9	1905 aa	Known RBP	12.66	□□□□□ -0.38
CHTF8-206	ENST00000519534	TRIM75P	A6NK02	468 aa		12.65	□□□□□ -0.38
CHTF8-206	ENST00000519534	WDR46	O15213	610 aa	Known RBP	12.65	□□□□□ -0.38
CHTF8-206	ENST00000519534	DDAH1	O94760	285 aa		12.65	□□□□□ -0.38
CHTF8-206	ENST00000519534	SMARCA1	P28370	1054 aa		12.65	□□□□□ -0.38
CHTF8-206	ENST00000519534	NEK4	P51957	841 aa		12.65	□□□□□ -0.38
CHTF8-206	ENST00000519534	FGD1	P98174	961 aa		12.65	□□□□□ -0.38
CHTF8-206	ENST00000519534	TROAP	Q12815	778 aa		12.65	□□□□□ -0.38
CHTF8-206	ENST00000519534	OTUD7B	Q6GQQ9	843 aa		12.65	□□□□□ -0.38
CHTF8-206	ENST00000519534	SAMD1	Q6SPF0	538 aa	Predicted RBP	12.65	□□□□□ -0.38
CHTF8-206	ENST00000519534	SYNE3	Q6ZMZ3	975 aa		12.65	□□□□□ -0.38
CHTF8-206	ENST00000519534		Q6ZUG5	572 aa		12.65	□□□□□ -0.38
CHTF8-206	ENST00000519534	CATIP	Q7Z7H3	387 aa		12.65	□□□□□ -0.38
CHTF8-206	ENST00000519534	PNMA1	Q8ND90	353 aa		12.65	□□□□□ -0.38
CHTF8-206	ENST00000519534	DCAF4	Q8WV16	495 aa		12.65	□□□□□ -0.38
CHTF8-206	ENST00000519534	ZKSCAN3	Q9BRR0	538 aa		12.65	□□□□□ -0.38
CHTF8-206	ENST00000519534	EMILIN3	Q9NT22	766 aa		12.65	□□□□□ -0.38
CHTF8-206	ENST00000519534	CCDC69	A6NI79	296 aa		12.64	□□□□□ -0.39
CHTF8-206	ENST00000519534	ST18	O60284	1047 aa		12.64	□□□□□ -0.39
CHTF8-206	ENST00000519534	ALDH1A1	P00352	501 aa		12.64	□□□□□ -0.39
CHTF8-206	ENST00000519534	FDX1	P10109	184 aa		12.64	□□□□□ -0.39
CHTF8-206	ENST00000519534	ATP2B2	Q01814	1243 aa		12.64	□□□□□ -0.39
CHTF8-206	ENST00000519534	MTMR2	Q13614	643 aa		12.64	□□□□□ -0.39
CHTF8-206	ENST00000519534	MOGS	Q13724	837 aa		12.64	□□□□□ -0.39
CHTF8-206	ENST00000519534	GPATCH4	Q5T3I0	446 aa	Known RBP	12.64	□□□□□ -0.39
CHTF8-206	ENST00000519534	SLFN13	Q68D06	897 aa		12.64	□□□□□ -0.39
CHTF8-206	ENST00000519534	CHST3	Q7LGC8	479 aa		12.64	□□□□□ -0.39
CHTF8-206	ENST00000519534	ANKRD23	Q86SG2	305 aa		12.64	□□□□□ -0.39
CHTF8-206	ENST00000519534	CAPNS2	Q96L46	248 aa		12.64	□□□□□ -0.39
CHTF8-206	ENST00000519534	FEZ1	Q99689	392 aa		12.64	□□□□□ -0.39
CHTF8-206	ENST00000519534	LZTS2	Q9BRK4	669 aa		12.64	□□□□□ -0.39
CHTF8-206	ENST00000519534	HOXC10	Q9NYD6	342 aa		12.64	□□□□□ -0.39
CHTF8-206	ENST00000519534	SLC12A7	Q9Y666	1083 aa		12.64	□□□□□ -0.39
CHTF8-206	ENST00000519534	MYPN	Q86TC9	1320 aa		12.63	□□□□□ -0.39
CHTF8-206	ENST00000519534	WDR33	Q9C0J8	1336 aa	Known RBP	12.63	□□□□□ -0.39
CHTF8-206	ENST00000519534	TRPM7	Q96QT4	1865 aa		12.63	□□□□□ -0.39
CHTF8-206	ENST00000519534	CCDC196	A0A1B0GTZ2	297 aa		12.63	□□□□□ -0.39
CHTF8-206	ENST00000519534	USP17L15	C9J2P7	530 aa		12.63	□□□□□ -0.39
CHTF8-206	ENST00000519534	USP17L13	C9JLJ4	530 aa		12.63	□□□□□ -0.39
CHTF8-206	ENST00000519534	USP17L11	C9JVI0	530 aa		12.63	□□□□□ -0.39
CHTF8-206	ENST00000519534	USP17L18	D6R9N7	530 aa		12.63	□□□□□ -0.39
CHTF8-206	ENST00000519534	USP17L22	D6RA61	530 aa		12.63	□□□□□ -0.39
CHTF8-206	ENST00000519534	USP17L17	D6RBQ6	530 aa		12.63	□□□□□ -0.39
CHTF8-206	ENST00000519534	USP17L19	D6RCP7	530 aa		12.63	□□□□□ -0.39
CHTF8-206	ENST00000519534	USP17L20	D6RJB6	530 aa		12.63	□□□□□ -0.39
CHTF8-206	ENST00000519534	NDUFB10	O96000	172 aa		12.63	□□□□□ -0.39
CHTF8-206	ENST00000519534	PDHB	P11177	359 aa		12.63	□□□□□ -0.39
CHTF8-206	ENST00000519534	KIF5B	P33176	963 aa		12.63	□□□□□ -0.39
CHTF8-206	ENST00000519534	GNAQ	P50148	359 aa		12.63	□□□□□ -0.39
CHTF8-206	ENST00000519534	USP17L24	Q0WX57	530 aa		12.63	□□□□□ -0.39
CHTF8-206	ENST00000519534	BTNL9	Q6UXG8	535 aa		12.63	□□□□□ -0.39
CHTF8-206	ENST00000519534	UPF3B	Q9BZI7	483 aa	Known RBP	12.63	□□□□□ -0.39
CHTF8-206	ENST00000519534	AGTPBP1	Q9UPW5	1226 aa		12.63	□□□□□ -0.39
CHTF8-206	ENST00000519534	LAMB1	P07942	1786 aa		12.63	□□□□□ -0.39
CHTF8-206	ENST00000519534	LAMA4	Q16363	1823 aa		12.62	□□□□□ -0.39
CHTF8-206	ENST00000519534	CCL15-CCL14	A0A0B4J2E2	113 aa		12.62	□□□□□ -0.39
CHTF8-206	ENST00000519534	PALM3	A6NDB9	673 aa	Predicted RBP	12.62	□□□□□ -0.39
CHTF8-206	ENST00000519534	BMP3	P12645	472 aa		12.62	□□□□□ -0.39
CHTF8-206	ENST00000519534	VCAM1	P19320	739 aa		12.62	□□□□□ -0.39
CHTF8-206	ENST00000519534	SLC1A4	P43007	532 aa		12.62	□□□□□ -0.39
CHTF8-206	ENST00000519534	HMGCS2	P54868	508 aa		12.62	□□□□□ -0.39
CHTF8-206	ENST00000519534	KIF23	Q02241	960 aa	Predicted RBP	12.62	□□□□□ -0.39

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