RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.87■□□□□ 0.132e-6■□□□□ 9
VEGFA-219ENST00000518824 MYH4Q9Y623 1939 aa15.86■□□□□ 0.13
VEGFA-219ENST00000518824 POTEFA5A3E0 1075 aa15.86■□□□□ 0.13
VEGFA-219ENST00000518824 SPDYE16A6NNV3 312 aaPredicted RBP15.86■□□□□ 0.13
VEGFA-219ENST00000518824 ARMC5Q96C12 935 aa15.86■□□□□ 0.13
VEGFA-219ENST00000518824 NBPF3Q9H094 633 aa15.86■□□□□ 0.13
VEGFA-219ENST00000518824 PORCNQ9H237 461 aa15.86■□□□□ 0.13
VEGFA-219ENST00000518824 VCPKMTQ9H867 229 aa15.86■□□□□ 0.13
VEGFA-219ENST00000518824 KANSL2Q9H9L4 492 aa15.86■□□□□ 0.13
VEGFA-219ENST00000518824 ARHGEF10LQ9HCE6 1279 aa15.86■□□□□ 0.13
VEGFA-219ENST00000518824 BTBD7Q9P203 1132 aa15.86■□□□□ 0.13
VEGFA-219ENST00000518824 TNPO2O14787 897 aaKnown RBP15.85■□□□□ 0.13
VEGFA-219ENST00000518824 FLT3LGP49771 235 aa15.85■□□□□ 0.13
VEGFA-219ENST00000518824 HAND2P61296 217 aa15.85■□□□□ 0.13
VEGFA-219ENST00000518824 ERVK-9P63128 1117 aa15.85■□□□□ 0.13
VEGFA-219ENST00000518824 ERVK-24P63145 666 aa15.85■□□□□ 0.13
VEGFA-219ENST00000518824 ARHGEF6Q15052 776 aa15.85■□□□□ 0.13
VEGFA-219ENST00000518824 ALX1Q15699 326 aa15.85■□□□□ 0.13
VEGFA-219ENST00000518824 SLC9C1Q4G0N8 1177 aa15.85■□□□□ 0.13
VEGFA-219ENST00000518824 ZNF444Q8N0Y2 327 aaPredicted RBP15.85■□□□□ 0.13
VEGFA-219ENST00000518824 CEP95Q96GE4 821 aa15.85■□□□□ 0.13
VEGFA-219ENST00000518824 ZNF333Q96JL9 665 aa15.85■□□□□ 0.13
VEGFA-219ENST00000518824 NUP88Q99567 741 aaPredicted RBP15.85■□□□□ 0.13
VEGFA-219ENST00000518824 FBXO28Q9NVF7 368 aa15.85■□□□□ 0.13
VEGFA-219ENST00000518824 CENPFP49454 3210 aa15.84■□□□□ 0.13
VEGFA-219ENST00000518824 NMT2O60551 498 aa15.84■□□□□ 0.13
VEGFA-219ENST00000518824 GNRH1P01148 92 aa15.84■□□□□ 0.13
VEGFA-219ENST00000518824 ELNP15502 786 aa15.84■□□□□ 0.13
VEGFA-219ENST00000518824 RGS19P49795 217 aa15.84■□□□□ 0.13
VEGFA-219ENST00000518824 TFAP4Q01664 338 aa15.84■□□□□ 0.13
VEGFA-219ENST00000518824 MTFR1Q15390 333 aa15.84■□□□□ 0.13
VEGFA-219ENST00000518824 TANGO6Q9C0B7 1094 aa15.84■□□□□ 0.13
VEGFA-219ENST00000518824 DIAPH3Q9NSV4 1193 aa15.84■□□□□ 0.13
VEGFA-219ENST00000518824 ANAPC4Q9UJX5 808 aa15.84■□□□□ 0.13
VEGFA-219ENST00000518824 GJD2Q9UKL4 321 aa15.84■□□□□ 0.13
VEGFA-219ENST00000518824 A0A0G2JMZ2 1700 aa15.83■□□□□ 0.13
VEGFA-219ENST00000518824 SAMD1Q6SPF0 538 aaPredicted RBP15.83■□□□□ 0.12
VEGFA-219ENST00000518824 TICAM2Q86XR7 235 aa15.83■□□□□ 0.12
VEGFA-219ENST00000518824 LRRC47Q8N1G4 583 aaKnown RBP15.83■□□□□ 0.12
VEGFA-219ENST00000518824 GPRC5AQ8NFJ5 357 aa15.83■□□□□ 0.12
VEGFA-219ENST00000518824 NEDD1Q8NHV4 660 aa15.83■□□□□ 0.12
VEGFA-219ENST00000518824 RAET1EQ8TD07 263 aa15.83■□□□□ 0.12
VEGFA-219ENST00000518824 CHMP4CQ96CF2 233 aa15.83■□□□□ 0.12
VEGFA-219ENST00000518824 ATG4CQ96DT6 458 aa15.83■□□□□ 0.12
VEGFA-219ENST00000518824 IL17RBQ9NRM6 502 aa15.83■□□□□ 0.12
VEGFA-219ENST00000518824 MTMR4Q9NYA4 1195 aa15.83■□□□□ 0.12
VEGFA-219ENST00000518824 NYAP2Q9P242 653 aa15.83■□□□□ 0.12
VEGFA-219ENST00000518824 CLIP2Q9UDT6 1046 aa15.83■□□□□ 0.12
VEGFA-219ENST00000518824 COL11A1P12107 1806 aaPredicted RBP15.82■□□□□ 0.12
VEGFA-219ENST00000518824 RAD21O60216 631 aa15.82■□□□□ 0.12
VEGFA-219ENST00000518824 HOXD10P28358 340 aa15.82■□□□□ 0.12
VEGFA-219ENST00000518824 GRK4P32298 578 aa15.82■□□□□ 0.12
VEGFA-219ENST00000518824 PRMT2P55345 433 aa15.82■□□□□ 0.12
VEGFA-219ENST00000518824 PDE4BQ07343 736 aa15.82■□□□□ 0.12
VEGFA-219ENST00000518824 FAM83BQ5T0W9 1011 aa15.82■□□□□ 0.12
VEGFA-219ENST00000518824 LBX2Q6XYB7 198 aa15.82■□□□□ 0.12
VEGFA-219ENST00000518824 RASGRP2Q7LDG7 609 aa15.82■□□□□ 0.12
VEGFA-219ENST00000518824 TBC1D10CQ8IV04 446 aa15.82■□□□□ 0.12
VEGFA-219ENST00000518824 RABGAP1Q9Y3P9 1069 aa15.82■□□□□ 0.12
VEGFA-219ENST00000518824 PLIN4Q96Q06 1357 aa15.82■□□□□ 0.12
VEGFA-219ENST00000518824 F5H6K3 240 aa15.81■□□□□ 0.12
VEGFA-219ENST00000518824 WDR46O15213 610 aaKnown RBP15.81■□□□□ 0.12
VEGFA-219ENST00000518824 ADCY3O60266 1144 aa15.81■□□□□ 0.12
VEGFA-219ENST00000518824 NDUFB10O96000 172 aa15.81■□□□□ 0.12
VEGFA-219ENST00000518824 FGRP09769 529 aa15.81■□□□□ 0.12
VEGFA-219ENST00000518824 TSPY3P0CV98 308 aa15.81■□□□□ 0.12
VEGFA-219ENST00000518824 TSPY8P0CW00 308 aa15.81■□□□□ 0.12
VEGFA-219ENST00000518824 DSG3P32926 999 aa15.81■□□□□ 0.12
VEGFA-219ENST00000518824 KLRC3Q07444 240 aa15.81■□□□□ 0.12
VEGFA-219ENST00000518824 KIAA0100Q14667 2235 aaKnown RBP15.81■□□□□ 0.12
VEGFA-219ENST00000518824 COG2Q14746 738 aa15.81■□□□□ 0.12
VEGFA-219ENST00000518824 LPAR1Q92633 364 aa15.81■□□□□ 0.12
VEGFA-219ENST00000518824 COA7Q96BR5 231 aa15.81■□□□□ 0.12
VEGFA-219ENST00000518824 LAMA4Q16363 1823 aa15.8■□□□□ 0.12
VEGFA-219ENST00000518824 RBBP6Q7Z6E9 1792 aaKnown RBP15.8■□□□□ 0.12
VEGFA-219ENST00000518824 ZMYM6O95789 1325 aa15.8■□□□□ 0.12
VEGFA-219ENST00000518824 FLOT1O75955 427 aa15.8■□□□□ 0.12
VEGFA-219ENST00000518824 SLC3A2P08195 630 aaKnown RBP15.8■□□□□ 0.12
VEGFA-219ENST00000518824 EN2P19622 333 aaPredicted RBP15.8■□□□□ 0.12
VEGFA-219ENST00000518824 CHMLP26374 656 aa15.8■□□□□ 0.12
VEGFA-219ENST00000518824 TRIM32Q13049 653 aa15.8■□□□□ 0.12
VEGFA-219ENST00000518824 RRP12Q5JTH9 1297 aaKnown RBP15.8■□□□□ 0.12
VEGFA-219ENST00000518824 GPR142Q7Z601 462 aa15.8■□□□□ 0.12
VEGFA-219ENST00000518824 SH2D4AQ9H788 454 aa15.8■□□□□ 0.12
VEGFA-219ENST00000518824 NEDD4P46934 1319 aa15.79■□□□□ 0.12
VEGFA-219ENST00000518824 ORC4O43929 436 aa15.79■□□□□ 0.12
VEGFA-219ENST00000518824 RANBP6O60518 1105 aaKnown RBP15.79■□□□□ 0.12
VEGFA-219ENST00000518824 CYP2B6P20813 491 aa15.79■□□□□ 0.12
VEGFA-219ENST00000518824 IRF5Q13568 498 aa15.79■□□□□ 0.12
VEGFA-219ENST00000518824 GTF3C2Q8WUA4 911 aaPredicted RBP15.79■□□□□ 0.12
VEGFA-219ENST00000518824 MKL1Q969V6 931 aa15.79■□□□□ 0.12
VEGFA-219ENST00000518824 MOV10L1Q9BXT6 1211 aaKnown RBP15.79■□□□□ 0.12
VEGFA-219ENST00000518824 ZNF287Q9HBT7 754 aa15.79■□□□□ 0.12
VEGFA-219ENST00000518824 GOPCQ9HD26 462 aa15.79■□□□□ 0.12
VEGFA-219ENST00000518824 TSPY2A6NKD2 308 aa15.78■□□□□ 0.12
VEGFA-219ENST00000518824 HIP1O00291 1037 aa15.78■□□□□ 0.12
VEGFA-219ENST00000518824 TTLL1O95922 423 aa15.78■□□□□ 0.12
VEGFA-219ENST00000518824 PTH1RQ03431 593 aa15.78■□□□□ 0.12
VEGFA-219ENST00000518824 TMEM132BQ14DG7 1078 aa15.78■□□□□ 0.12
VEGFA-219ENST00000518824 CCL14Q16627 93 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms