RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 SHROOM1Q2M3G4 852 aaPredicted RBP10.89□□□□□ -0.67
PVT1-207ENST00000518528 FAM47AQ5JRC9 791 aa10.89□□□□□ -0.67
PVT1-207ENST00000518528 CCDC158Q5M9N0 1113 aa10.89□□□□□ -0.67
PVT1-207ENST00000518528 TTC39AQ5SRH9 613 aa10.89□□□□□ -0.67
PVT1-207ENST00000518528 TTC6Q86TZ1 520 aa10.89□□□□□ -0.67
PVT1-207ENST00000518528 SLC44A5Q8NCS7 719 aa10.89□□□□□ -0.67
PVT1-207ENST00000518528 NUP133Q8WUM0 1156 aa10.89□□□□□ -0.67
PVT1-207ENST00000518528 TOX2Q96NM4 488 aa10.89□□□□□ -0.67
PVT1-207ENST00000518528 MOV10L1Q9BXT6 1211 aaKnown RBP10.89□□□□□ -0.67
PVT1-207ENST00000518528 API5Q9BZZ5 524 aaKnown RBP10.89□□□□□ -0.67
PVT1-207ENST00000518528 TANGO6Q9C0B7 1094 aa10.89□□□□□ -0.67
PVT1-207ENST00000518528 SPATC1LQ9H0A9 340 aa10.89□□□□□ -0.67
PVT1-207ENST00000518528 SERPINB13Q9UIV8 391 aa10.89□□□□□ -0.67
PVT1-207ENST00000518528 MSRAQ9UJ68 235 aa10.89□□□□□ -0.67
PVT1-207ENST00000518528 HCN4Q9Y3Q4 1203 aa10.89□□□□□ -0.67
PVT1-207ENST00000518528 MYH13Q9UKX3 1938 aa10.89□□□□□ -0.67
PVT1-207ENST00000518528 SPTBN5Q9NRC6 3674 aaKnown RBP10.89□□□□□ -0.67
PVT1-207ENST00000518528 PLXNB2O15031 1838 aa10.88□□□□□ -0.67
PVT1-207ENST00000518528 FCER1AP12319 257 aa10.88□□□□□ -0.67
PVT1-207ENST00000518528 IGFBP4P22692 258 aa10.88□□□□□ -0.67
PVT1-207ENST00000518528 PLS1Q14651 629 aa10.88□□□□□ -0.67
PVT1-207ENST00000518528 RAB30Q15771 203 aa10.88□□□□□ -0.67
PVT1-207ENST00000518528 PRAMEF19Q5SWL8 479 aa10.88□□□□□ -0.67
PVT1-207ENST00000518528 TATDN1Q6P1N9 297 aa10.88□□□□□ -0.67
PVT1-207ENST00000518528 NCAPG2Q86XI2 1143 aa10.88□□□□□ -0.67
PVT1-207ENST00000518528 TSEN34Q9BSV6 310 aaKnown RBP10.88□□□□□ -0.67
PVT1-207ENST00000518528 EHD4Q9H223 541 aa10.88□□□□□ -0.67
PVT1-207ENST00000518528 MTIF3Q9H2K0 278 aaKnown RBP10.88□□□□□ -0.67
PVT1-207ENST00000518528 ARIH1Q9Y4X5 557 aaPredicted RBP10.88□□□□□ -0.67
PVT1-207ENST00000518528 MROH7Q68CQ1 1323 aa10.87□□□□□ -0.67
PVT1-207ENST00000518528 A0A1W2PQ45 241 aaPredicted RBP10.87□□□□□ -0.67
PVT1-207ENST00000518528 A0A1W2PQY0 241 aa10.87□□□□□ -0.67
PVT1-207ENST00000518528 ANP32CO43423 234 aa10.87□□□□□ -0.67
PVT1-207ENST00000518528 COBLO75128 1261 aa10.87□□□□□ -0.67
PVT1-207ENST00000518528 TIMP1P01033 207 aa10.87□□□□□ -0.67
PVT1-207ENST00000518528 ITGB8P26012 769 aa10.87□□□□□ -0.67
PVT1-207ENST00000518528 HOXD11P31277 338 aaPredicted RBP10.87□□□□□ -0.67
PVT1-207ENST00000518528 ANKRD33Q7Z3H0 272 aa10.87□□□□□ -0.67
PVT1-207ENST00000518528 ACER1Q8TDN7 264 aa10.87□□□□□ -0.67
PVT1-207ENST00000518528 MAML3Q96JK9 1138 aa10.87□□□□□ -0.67
PVT1-207ENST00000518528 PRDM12Q9H4Q4 367 aa10.87□□□□□ -0.67
PVT1-207ENST00000518528 STARD7Q9NQZ5 370 aa10.87□□□□□ -0.67
PVT1-207ENST00000518528 SNRKQ9NRH2 765 aa10.87□□□□□ -0.67
PVT1-207ENST00000518528 MAST2Q6P0Q8 1798 aa10.87□□□□□ -0.67
PVT1-207ENST00000518528 LAMA2P24043 3122 aaKnown RBP10.86□□□□□ -0.67
PVT1-207ENST00000518528 SLC25A27O95847 323 aa10.86□□□□□ -0.67
PVT1-207ENST00000518528 PGK1P00558 417 aa10.86□□□□□ -0.67
PVT1-207ENST00000518528 AKR1A1P14550 325 aa10.86□□□□□ -0.67
PVT1-207ENST00000518528 CYP7A1P22680 504 aa10.86□□□□□ -0.67
PVT1-207ENST00000518528 MTX1Q13505 466 aa10.86□□□□□ -0.67
PVT1-207ENST00000518528 CCDC85BQ15834 202 aaPredicted RBP10.86□□□□□ -0.67
PVT1-207ENST00000518528 MFSD5Q6N075 450 aa10.86□□□□□ -0.67
PVT1-207ENST00000518528 PSRC1Q6PGN9 363 aaPredicted RBP10.86□□□□□ -0.67
PVT1-207ENST00000518528 FAM9BQ8IZU0 186 aa10.86□□□□□ -0.67
PVT1-207ENST00000518528 TMEM199Q8N511 208 aa10.86□□□□□ -0.67
PVT1-207ENST00000518528 MEIS3Q99687 375 aa10.86□□□□□ -0.67
PVT1-207ENST00000518528 CNPY2Q9Y2B0 182 aa10.86□□□□□ -0.67
PVT1-207ENST00000518528 PIEZO1Q92508 2521 aa10.86□□□□□ -0.67
PVT1-207ENST00000518528 PRUNE2Q8WUY3 3088 aa10.86□□□□□ -0.67
PVT1-207ENST00000518528 MOXD2PA6NHM9 499 aa10.85□□□□□ -0.67
PVT1-207ENST00000518528 APBB1O00213 710 aa10.85□□□□□ -0.67
PVT1-207ENST00000518528 MPHOSPH10O00566 681 aaKnown RBP10.85□□□□□ -0.67
PVT1-207ENST00000518528 COPB2P35606 906 aa10.85□□□□□ -0.67
PVT1-207ENST00000518528 FAAP100Q0VG06 881 aa10.85□□□□□ -0.67
PVT1-207ENST00000518528 KCTD2Q14681 263 aa10.85□□□□□ -0.67
PVT1-207ENST00000518528 TMED8Q6PL24 325 aaPredicted RBP10.85□□□□□ -0.67
PVT1-207ENST00000518528 VTI1AQ96AJ9 217 aa10.85□□□□□ -0.67
PVT1-207ENST00000518528 MMP19Q99542 508 aa10.85□□□□□ -0.67
PVT1-207ENST00000518528 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.85□□□□□ -0.671e-10■□□□□ 10.1
PVT1-207ENST00000518528 PBX4Q9BYU1 374 aa10.85□□□□□ -0.67
PVT1-207ENST00000518528 SH2D4AQ9H788 454 aa10.85□□□□□ -0.67
PVT1-207ENST00000518528 SPC25Q9HBM1 224 aa10.85□□□□□ -0.67
PVT1-207ENST00000518528 CXXC1Q9P0U4 656 aaPredicted RBP10.85□□□□□ -0.67
PVT1-207ENST00000518528 NOB1Q9ULX3 412 aaKnown RBP10.85□□□□□ -0.67
PVT1-207ENST00000518528 BDP1A6H8Y1 2624 aa10.84□□□□□ -0.67
PVT1-207ENST00000518528 TLR3O15455 904 aaKnown RBP10.84□□□□□ -0.67
PVT1-207ENST00000518528 FLOT1O75955 427 aa10.84□□□□□ -0.67
PVT1-207ENST00000518528 POLR3DP05423 398 aaPredicted RBP10.84□□□□□ -0.67
PVT1-207ENST00000518528 DSG3P32926 999 aa10.84□□□□□ -0.67
PVT1-207ENST00000518528 ACLYP53396 1101 aa10.84□□□□□ -0.67
PVT1-207ENST00000518528 DYNLL1P63167 89 aaKnown RBP10.84□□□□□ -0.67
PVT1-207ENST00000518528 OS9Q13438 667 aaPredicted RBP10.84□□□□□ -0.67
PVT1-207ENST00000518528 TMEM240Q5SV17 173 aa10.84□□□□□ -0.67
PVT1-207ENST00000518528 ADGRA1Q86SQ6 560 aa10.84□□□□□ -0.67
PVT1-207ENST00000518528 GLT1D1Q96MS3 346 aa10.84□□□□□ -0.67
PVT1-207ENST00000518528 TINF2Q9BSI4 451 aa10.84□□□□□ -0.67
PVT1-207ENST00000518528 SLC28A3Q9HAS3 691 aa10.84□□□□□ -0.67
PVT1-207ENST00000518528 GPR108Q9NPR9 543 aa10.84□□□□□ -0.67
PVT1-207ENST00000518528 DIS3Q9Y2L1 958 aaKnown RBP10.84□□□□□ -0.67
PVT1-207ENST00000518528 ELP1O95163 1332 aa10.84□□□□□ -0.67
PVT1-207ENST00000518528 ZNF521Q96K83 1311 aa10.84□□□□□ -0.67
PVT1-207ENST00000518528 SYNGAP1Q96PV0 1343 aa10.84□□□□□ -0.67
PVT1-207ENST00000518528 IDH1O75874 414 aaKnown RBP10.83□□□□□ -0.68
PVT1-207ENST00000518528 CYP2E1P05181 493 aaPredicted RBP10.83□□□□□ -0.68
PVT1-207ENST00000518528 CT47B1P0C2W7 299 aaPredicted RBP10.83□□□□□ -0.68
PVT1-207ENST00000518528 PBX2P40425 430 aa10.83□□□□□ -0.68
PVT1-207ENST00000518528 SEPT2Q15019 361 aa10.83□□□□□ -0.68
PVT1-207ENST00000518528 SKIV2LQ15477 1246 aaKnown RBP10.83□□□□□ -0.68
PVT1-207ENST00000518528 SAMD1Q6SPF0 538 aaPredicted RBP10.83□□□□□ -0.68
PVT1-207ENST00000518528 MSL3Q8N5Y2 521 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms