RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 SEPT2Q15019 361 aa8.88□□□□□ -0.99
TNFRSF11B-202ENST00000517352 SHROOM1Q2M3G4 852 aaPredicted RBP8.88□□□□□ -0.99
TNFRSF11B-202ENST00000517352 MORN1Q5T089 497 aa8.88□□□□□ -0.99
TNFRSF11B-202ENST00000517352 ZSCAN25Q6NSZ9 544 aa8.88□□□□□ -0.99
TNFRSF11B-202ENST00000517352 TMEM179Q6ZVK1 233 aa8.88□□□□□ -0.99
TNFRSF11B-202ENST00000517352 METTL16Q86W50 562 aaKnown RBP8.88□□□□□ -0.99
TNFRSF11B-202ENST00000517352 ACER1Q8TDN7 264 aa8.88□□□□□ -0.99
TNFRSF11B-202ENST00000517352 BBXQ8WY36 941 aaPredicted RBP8.88□□□□□ -0.99
TNFRSF11B-202ENST00000517352 LPAR1Q92633 364 aa8.88□□□□□ -0.99
TNFRSF11B-202ENST00000517352 KIF1BPQ96EK5 621 aa8.88□□□□□ -0.99
TNFRSF11B-202ENST00000517352 GDF15Q99988 308 aa8.88□□□□□ -0.99
TNFRSF11B-202ENST00000517352 ANTXR1Q9H6X2 564 aa8.88□□□□□ -0.99
TNFRSF11B-202ENST00000517352 DNAJC18Q9H819 358 aa8.88□□□□□ -0.99
TNFRSF11B-202ENST00000517352 ZSWIM8A7E2V4 1837 aa8.88□□□□□ -0.99
TNFRSF11B-202ENST00000517352 LAMB1P07942 1786 aa8.88□□□□□ -0.99
TNFRSF11B-202ENST00000517352 DOCK2Q92608 1830 aa8.87□□□□□ -0.99
TNFRSF11B-202ENST00000517352 ZNF532Q9HCE3 1301 aa8.87□□□□□ -0.99
TNFRSF11B-202ENST00000517352 DNM1LO00429 736 aa8.87□□□□□ -0.99
TNFRSF11B-202ENST00000517352 ADORA2AP29274 412 aa8.87□□□□□ -0.99
TNFRSF11B-202ENST00000517352 PLCD1P51178 756 aa8.87□□□□□ -0.99
TNFRSF11B-202ENST00000517352 KCTD2Q14681 263 aa8.87□□□□□ -0.99
TNFRSF11B-202ENST00000517352 LRIT3Q3SXY7 679 aa8.87□□□□□ -0.99
TNFRSF11B-202ENST00000517352 MAP3K21Q5TCX8 1036 aa8.87□□□□□ -0.99
TNFRSF11B-202ENST00000517352 GPR153Q6NV75 609 aa8.87□□□□□ -0.99
TNFRSF11B-202ENST00000517352 CEP85Q6P2H3 762 aa8.87□□□□□ -0.99
TNFRSF11B-202ENST00000517352 SPICE1Q8N0Z3 855 aa8.87□□□□□ -0.99
TNFRSF11B-202ENST00000517352 MB21D1Q8N884 522 aa8.87□□□□□ -0.99
TNFRSF11B-202ENST00000517352 RHPN1Q8TCX5 695 aa8.87□□□□□ -0.99
TNFRSF11B-202ENST00000517352 C12orf42Q96LP6 360 aa8.87□□□□□ -0.99
TNFRSF11B-202ENST00000517352 MROH8Q9H579 483 aa8.87□□□□□ -0.99
TNFRSF11B-202ENST00000517352 GOPCQ9HD26 462 aa8.87□□□□□ -0.99
TNFRSF11B-202ENST00000517352 RANBP2P49792 3224 aaKnown RBP8.86□□□□□ -0.99
TNFRSF11B-202ENST00000517352 DOCK1Q14185 1865 aa8.86□□□□□ -0.99
TNFRSF11B-202ENST00000517352 SOX1O00570 391 aaPredicted RBP8.86□□□□□ -0.99
TNFRSF11B-202ENST00000517352 RAB11FIP3O75154 756 aa8.86□□□□□ -0.99
TNFRSF11B-202ENST00000517352 RARBP10826 455 aa8.86□□□□□ -0.99
TNFRSF11B-202ENST00000517352 PDE6AP16499 860 aa8.86□□□□□ -0.99
TNFRSF11B-202ENST00000517352 ERCC3P19447 782 aa8.86□□□□□ -0.99
TNFRSF11B-202ENST00000517352 ICA1Q05084 483 aa8.86□□□□□ -0.99
TNFRSF11B-202ENST00000517352 LRRC26Q2I0M4 334 aa8.86□□□□□ -0.99
TNFRSF11B-202ENST00000517352 GJC2Q5T442 439 aaPredicted RBP8.86□□□□□ -0.99
TNFRSF11B-202ENST00000517352 ZNF697Q5TEC3 545 aa8.86□□□□□ -0.99
TNFRSF11B-202ENST00000517352 ANO1Q5XXA6 986 aa8.86□□□□□ -0.99
TNFRSF11B-202ENST00000517352 Q7L0L9 218 aa8.86□□□□□ -0.99
TNFRSF11B-202ENST00000517352 RNF180Q86T96 592 aa8.86□□□□□ -0.99
TNFRSF11B-202ENST00000517352 PANK1Q8TE04 598 aa8.86□□□□□ -0.99
TNFRSF11B-202ENST00000517352 SDR42E1Q8WUS8 393 aa8.86□□□□□ -0.99
TNFRSF11B-202ENST00000517352 GPATCH3Q96I76 525 aa8.86□□□□□ -0.99
TNFRSF11B-202ENST00000517352 FAM161BQ96MY7 647 aa8.86□□□□□ -0.99
TNFRSF11B-202ENST00000517352 SPATC1LQ9H0A9 340 aa8.86□□□□□ -0.99
TNFRSF11B-202ENST00000517352 PRO3102Q9H379 93 aa8.86□□□□□ -0.99
TNFRSF11B-202ENST00000517352 BOLA2Q9H3K6 86 aa8.86□□□□□ -0.99
TNFRSF11B-202ENST00000517352 ARMT1Q9H993 441 aa8.86□□□□□ -0.99
TNFRSF11B-202ENST00000517352 MKNK2Q9HBH9 465 aa8.86□□□□□ -0.99
TNFRSF11B-202ENST00000517352 ZBTB47Q9UFB7 747 aaPredicted RBP8.86□□□□□ -0.99
TNFRSF11B-202ENST00000517352 DDX19BQ9UMR2 479 aa8.86□□□□□ -0.99
TNFRSF11B-202ENST00000517352 CNPY2Q9Y2B0 182 aa8.86□□□□□ -0.99
TNFRSF11B-202ENST00000517352 SPDYE16A6NNV3 312 aaPredicted RBP8.85□□□□□ -0.99
TNFRSF11B-202ENST00000517352 SLC25A27O95847 323 aa8.85□□□□□ -0.99
TNFRSF11B-202ENST00000517352 APPP05067 770 aa8.85□□□□□ -0.99
TNFRSF11B-202ENST00000517352 SHMT1P34896 483 aa8.85□□□□□ -0.99
TNFRSF11B-202ENST00000517352 GRB14Q14449 540 aa8.85□□□□□ -0.99
TNFRSF11B-202ENST00000517352 LHX8Q68G74 356 aa8.85□□□□□ -0.99
TNFRSF11B-202ENST00000517352 RPAP2Q8IXW5 612 aaPredicted RBP8.85□□□□□ -0.99
TNFRSF11B-202ENST00000517352 USP6NLQ92738 828 aa8.85□□□□□ -0.99
TNFRSF11B-202ENST00000517352 FERMT2Q96AC1 680 aa8.85□□□□□ -0.99
TNFRSF11B-202ENST00000517352 VTI1AQ96AJ9 217 aa8.85□□□□□ -0.99
TNFRSF11B-202ENST00000517352 DDX11Q96FC9 970 aa8.85□□□□□ -0.99
TNFRSF11B-202ENST00000517352 CCDC17Q96LX7 622 aa8.85□□□□□ -0.99
TNFRSF11B-202ENST00000517352 MMP19Q99542 508 aa8.85□□□□□ -0.99
TNFRSF11B-202ENST00000517352 MOV10L1Q9BXT6 1211 aaKnown RBP8.85□□□□□ -0.99
TNFRSF11B-202ENST00000517352 ZNF287Q9HBT7 754 aa8.85□□□□□ -0.99
TNFRSF11B-202ENST00000517352 ATP8A2Q9NTI2 1148 aa8.85□□□□□ -0.99
TNFRSF11B-202ENST00000517352 PAG1Q9NWQ8 432 aa8.85□□□□□ -0.99
TNFRSF11B-202ENST00000517352 BTBD7Q9P203 1132 aa8.85□□□□□ -0.99
TNFRSF11B-202ENST00000517352 STXBP5LQ9Y2K9 1186 aa8.85□□□□□ -0.99
TNFRSF11B-202ENST00000517352 SLC4A4Q9Y6R1 1079 aa8.85□□□□□ -0.99
TNFRSF11B-202ENST00000517352 PFASO15067 1338 aa8.84□□□□□ -0.99
TNFRSF11B-202ENST00000517352 SEPT4O43236 478 aa8.84□□□□□ -0.99
TNFRSF11B-202ENST00000517352 GABBR2O75899 941 aa8.84□□□□□ -0.99
TNFRSF11B-202ENST00000517352 MBD4O95243 580 aa8.84□□□□□ -0.99
TNFRSF11B-202ENST00000517352 HOXC6P09630 235 aa8.84□□□□□ -0.99
TNFRSF11B-202ENST00000517352 RTP1P59025 263 aa8.84□□□□□ -0.99
TNFRSF11B-202ENST00000517352 LRRFIP1Q32MZ4 808 aaKnown RBP8.84□□□□□ -0.99
TNFRSF11B-202ENST00000517352 OLFML2BQ68BL8 750 aa8.84□□□□□ -0.99
TNFRSF11B-202ENST00000517352 LBX2Q6XYB7 198 aa8.84□□□□□ -0.99
TNFRSF11B-202ENST00000517352 STK11IPQ8N1F8 1099 aa8.84□□□□□ -0.99
TNFRSF11B-202ENST00000517352 LCORLQ8N3X6 602 aa8.84□□□□□ -0.99
TNFRSF11B-202ENST00000517352 SHCBP1Q8NEM2 672 aa8.84□□□□□ -0.99
TNFRSF11B-202ENST00000517352 KANSL2Q9H9L4 492 aa8.84□□□□□ -0.99
TNFRSF11B-202ENST00000517352 SPC25Q9HBM1 224 aa8.84□□□□□ -0.99
TNFRSF11B-202ENST00000517352 DCP1AQ9NPI6 582 aaPredicted RBP8.84□□□□□ -0.99
TNFRSF11B-202ENST00000517352 SZT2Q5T011 3432 aa8.84□□□□□ -0.99
TNFRSF11B-202ENST00000517352 MINDY4BA8MYZ0 360 aa8.83□□□□□ -1
TNFRSF11B-202ENST00000517352 USP17L12C9JPN9 530 aa8.83□□□□□ -1
TNFRSF11B-202ENST00000517352 USP17L21D6R901 530 aa8.83□□□□□ -1
TNFRSF11B-202ENST00000517352 WDR46O15213 610 aaKnown RBP8.83□□□□□ -1
TNFRSF11B-202ENST00000517352 CNMDO75829 334 aa8.83□□□□□ -1
TNFRSF11B-202ENST00000517352 CYP2D6P10635 497 aa8.83□□□□□ -1
TNFRSF11B-202ENST00000517352 COL6A1P12109 1028 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms