RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 ZKSCAN5Q9Y2L8 839 aa0.3□□□□□ -2.36
SNORA40.16-201ENST00000517238 FAN1Q9Y2M0 1017 aa0.3□□□□□ -2.36
SNORA40.16-201ENST00000517238 TP53BP1Q12888 1972 aaPredicted RBP0.29□□□□□ -2.36
SNORA40.16-201ENST00000517238 PRR33A8MZF0 331 aa0.29□□□□□ -2.36
SNORA40.16-201ENST00000517238 RTL8CO15255 209 aa0.29□□□□□ -2.36
SNORA40.16-201ENST00000517238 SPRY2O43597 315 aa0.29□□□□□ -2.36
SNORA40.16-201ENST00000517238 SCNN1AP37088 669 aa0.29□□□□□ -2.36
SNORA40.16-201ENST00000517238 KRTAP12-2P59991 146 aa0.29□□□□□ -2.36
SNORA40.16-201ENST00000517238 PSMA6P60900 246 aaKnown RBP0.29□□□□□ -2.36
SNORA40.16-201ENST00000517238 FOXF2Q12947 444 aa0.29□□□□□ -2.36
SNORA40.16-201ENST00000517238 RAPGEF1Q13905 1077 aa0.29□□□□□ -2.36
SNORA40.16-201ENST00000517238 TARBP2Q15633 366 aaKnown RBP0.29□□□□□ -2.36
SNORA40.16-201ENST00000517238 KIAA1161Q6NSJ0 714 aa0.29□□□□□ -2.36
SNORA40.16-201ENST00000517238 TTLL7Q6ZT98 887 aa0.29□□□□□ -2.36
SNORA40.16-201ENST00000517238 NLRX1Q86UT6 975 aa0.29□□□□□ -2.36
SNORA40.16-201ENST00000517238 ALDH16A1Q8IZ83 802 aa0.29□□□□□ -2.36
SNORA40.16-201ENST00000517238 SIMC1Q8NDZ2 872 aa0.29□□□□□ -2.36
SNORA40.16-201ENST00000517238 ANKS1AQ92625 1134 aa0.29□□□□□ -2.36
SNORA40.16-201ENST00000517238 QTRT2Q9H974 415 aaKnown RBP0.29□□□□□ -2.36
SNORA40.16-201ENST00000517238 SSU72Q9NP77 194 aaKnown RBP0.29□□□□□ -2.36
SNORA40.16-201ENST00000517238 ARHGAP20Q9P2F6 1191 aa0.29□□□□□ -2.36
SNORA40.16-201ENST00000517238 KLHL14Q9P2G3 628 aa0.29□□□□□ -2.36
SNORA40.16-201ENST00000517238 DMGDHQ9UI17 866 aaKnown RBP0.29□□□□□ -2.36
SNORA40.16-201ENST00000517238 ERRFI1Q9UJM3 462 aaPredicted RBP0.29□□□□□ -2.36
SNORA40.16-201ENST00000517238 PCOLCE2Q9UKZ9 415 aa0.29□□□□□ -2.36
SNORA40.16-201ENST00000517238 MAPK8IP1Q9UQF2 711 aa0.29□□□□□ -2.36
SNORA40.16-201ENST00000517238 ST14Q9Y5Y6 855 aa0.29□□□□□ -2.36
SNORA40.16-201ENST00000517238 SEMA3EO15041 775 aa0.28□□□□□ -2.36
SNORA40.16-201ENST00000517238 KIAA0355O15063 1070 aa0.28□□□□□ -2.36
SNORA40.16-201ENST00000517238 MPOP05164 745 aa0.28□□□□□ -2.36
SNORA40.16-201ENST00000517238 CTSBP07858 339 aa0.28□□□□□ -2.36
SNORA40.16-201ENST00000517238 MAOBP27338 520 aa0.28□□□□□ -2.36
SNORA40.16-201ENST00000517238 NOVP48745 357 aa0.28□□□□□ -2.36
SNORA40.16-201ENST00000517238 CCT4P50991 539 aaKnown RBP0.28□□□□□ -2.36
SNORA40.16-201ENST00000517238 ZNF200P98182 395 aaPredicted RBP0.28□□□□□ -2.36
SNORA40.16-201ENST00000517238 RAB3GAP1Q15042 981 aa0.28□□□□□ -2.36
SNORA40.16-201ENST00000517238 ZNF425Q6IV72 752 aa0.28□□□□□ -2.36
SNORA40.16-201ENST00000517238 SRRM1Q8IYB3 904 aaKnown RBP0.28□□□□□ -2.36
SNORA40.16-201ENST00000517238 ZNF276Q8N554 614 aa0.28□□□□□ -2.36
SNORA40.16-201ENST00000517238 ANKS4BQ8N8V4 417 aa0.28□□□□□ -2.36
SNORA40.16-201ENST00000517238 DBF4BQ8NFT6 615 aa0.28□□□□□ -2.36
SNORA40.16-201ENST00000517238 CCDC102AQ96A19 550 aa0.28□□□□□ -2.36
SNORA40.16-201ENST00000517238 NGLY1Q96IV0 654 aa0.28□□□□□ -2.36
SNORA40.16-201ENST00000517238 GGNBP2Q9H3C7 697 aa0.28□□□□□ -2.36
SNORA40.16-201ENST00000517238 ATXN3LQ9H3M9 355 aa0.28□□□□□ -2.36
SNORA40.16-201ENST00000517238 SOX17Q9H6I2 414 aaPredicted RBP0.28□□□□□ -2.36
SNORA40.16-201ENST00000517238 PPP1R9AQ9ULJ8 1098 aa0.28□□□□□ -2.36
SNORA40.16-201ENST00000517238 SOX13Q9UN79 622 aa0.28□□□□□ -2.36
SNORA40.16-201ENST00000517238 ZNF330Q9Y3S2 320 aaPredicted RBP0.28□□□□□ -2.36
SNORA40.16-201ENST00000517238 TCF20Q9UGU0 1960 aaKnown RBP0.28□□□□□ -2.36
SNORA40.16-201ENST00000517238 B4GALT3O60512 393 aa0.27□□□□□ -2.37
SNORA40.16-201ENST00000517238 PRG2P13727 222 aa0.27□□□□□ -2.37
SNORA40.16-201ENST00000517238 HCLS1P14317 486 aaPredicted RBP0.27□□□□□ -2.37
SNORA40.16-201ENST00000517238 HOXC13P31276 330 aa0.27□□□□□ -2.37
SNORA40.16-201ENST00000517238 MCAMP43121 646 aa0.27□□□□□ -2.37
SNORA40.16-201ENST00000517238 TAF6P49848 677 aa0.27□□□□□ -2.37
SNORA40.16-201ENST00000517238 FOXG1P55316 489 aaPredicted RBP0.27□□□□□ -2.37
SNORA40.16-201ENST00000517238 FGD1P98174 961 aa0.27□□□□□ -2.37
SNORA40.16-201ENST00000517238 DUSP4Q13115 394 aa0.27□□□□□ -2.37
SNORA40.16-201ENST00000517238 GRM2Q14416 872 aa0.27□□□□□ -2.37
SNORA40.16-201ENST00000517238 TTLL4Q14679 1199 aa0.27□□□□□ -2.37
SNORA40.16-201ENST00000517238 TUSC1Q2TAM9 212 aa0.27□□□□□ -2.37
SNORA40.16-201ENST00000517238 TSGA10IPQ3SY00 556 aa0.27□□□□□ -2.37
SNORA40.16-201ENST00000517238 NCAPG2Q86XI2 1143 aa0.27□□□□□ -2.37
SNORA40.16-201ENST00000517238 GPIHBP1Q8IV16 184 aa0.27□□□□□ -2.37
SNORA40.16-201ENST00000517238 OR13H1Q8NG92 308 aa0.27□□□□□ -2.37
SNORA40.16-201ENST00000517238 IL17DQ8TAD2 202 aa0.27□□□□□ -2.37
SNORA40.16-201ENST00000517238 NR4A3Q92570 626 aa0.27□□□□□ -2.37
SNORA40.16-201ENST00000517238 NELL1Q92832 810 aa0.27□□□□□ -2.37
SNORA40.16-201ENST00000517238 EDAQ92838 391 aa0.27□□□□□ -2.37
SNORA40.16-201ENST00000517238 CRTAC1Q9NQ79 661 aa0.27□□□□□ -2.37
SNORA40.16-201ENST00000517238 PRDM10Q9NQV6 1147 aa0.27□□□□□ -2.37
SNORA40.16-201ENST00000517238 PACSIN3Q9UKS6 424 aa0.27□□□□□ -2.37
SNORA40.16-201ENST00000517238 BCS1LQ9Y276 419 aa0.27□□□□□ -2.37
SNORA40.16-201ENST00000517238 IGKV2D-30A0A075B6S6 120 aa0.26□□□□□ -2.37
SNORA40.16-201ENST00000517238 IGKV6D-41A0A0C4DH26 115 aa0.26□□□□□ -2.37
SNORA40.16-201ENST00000517238 NUDT19A8MXV4 375 aa0.26□□□□□ -2.37
SNORA40.16-201ENST00000517238 TMPRSS2O15393 492 aa0.26□□□□□ -2.37
SNORA40.16-201ENST00000517238 EIF4EBP3O60516 100 aaPredicted RBP0.26□□□□□ -2.37
SNORA40.16-201ENST00000517238 NTN1O95631 604 aa0.26□□□□□ -2.37
SNORA40.16-201ENST00000517238 EFEMP2O95967 443 aa0.26□□□□□ -2.37
SNORA40.16-201ENST00000517238 C1RP00736 705 aa0.26□□□□□ -2.37
SNORA40.16-201ENST00000517238 CCKARP32238 428 aa0.26□□□□□ -2.37
SNORA40.16-201ENST00000517238 EPHA4P54764 986 aa0.26□□□□□ -2.37
SNORA40.16-201ENST00000517238 ERVFRD-1P60508 538 aa0.26□□□□□ -2.37
SNORA40.16-201ENST00000517238 EGR3Q06889 387 aa0.26□□□□□ -2.37
SNORA40.16-201ENST00000517238 TTLL12Q14166 644 aaPredicted RBP0.26□□□□□ -2.37
SNORA40.16-201ENST00000517238 SLC44A4Q53GD3 710 aa0.26□□□□□ -2.37
SNORA40.16-201ENST00000517238 GFI1BQ5VTD9 330 aa0.26□□□□□ -2.37
SNORA40.16-201ENST00000517238 MBNL2Q5VZF2 373 aaKnown RBP0.26□□□□□ -2.37
SNORA40.16-201ENST00000517238 SLFN13Q68D06 897 aa0.26□□□□□ -2.37
SNORA40.16-201ENST00000517238 FBXO42Q6P3S6 717 aa0.26□□□□□ -2.37
SNORA40.16-201ENST00000517238 ARHGEF18Q6ZSZ5 1173 aa0.26□□□□□ -2.37
SNORA40.16-201ENST00000517238 ERICH6Q7L0X2 663 aa0.26□□□□□ -2.37
SNORA40.16-201ENST00000517238 SH2D6Q7Z4S9 175 aa0.26□□□□□ -2.37
SNORA40.16-201ENST00000517238 PHF6Q8IWS0 365 aaKnown RBP eCLIP0.26□□□□□ -2.37
SNORA40.16-201ENST00000517238 TNS4Q8IZW8 715 aa0.26□□□□□ -2.37
SNORA40.16-201ENST00000517238 CMTR1Q8N1G2 835 aaKnown RBP0.26□□□□□ -2.37
SNORA40.16-201ENST00000517238 KREMEN1Q96MU8 473 aa0.26□□□□□ -2.37
SNORA40.16-201ENST00000517238 FANCD2OSQ96PS1 177 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms