RNA–Protein interactions for RNA: ENST00000516329.1

SNORA40.12-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 111 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.12-201ENST00000516329 DUSP13Q9UII6 198 aa5.47□□□□□ -1.53
SNORA40.12-201ENST00000516329 DDX41Q9UJV9 622 aaKnown RBP5.47□□□□□ -1.53
SNORA40.12-201ENST00000516329 CTNND2Q9UQB3 1225 aa5.47□□□□□ -1.53
SNORA40.12-201ENST00000516329 SHISA3A0PJX4 238 aa5.46□□□□□ -1.54
SNORA40.12-201ENST00000516329 TMPRSS7Q7RTY8 843 aa5.46□□□□□ -1.54
SNORA40.12-201ENST00000516329 REXO1Q8N1G1 1221 aaKnown RBP5.46□□□□□ -1.54
SNORA40.12-201ENST00000516329 FLAD1Q8NFF5 587 aa5.46□□□□□ -1.54
SNORA40.12-201ENST00000516329 TMEM40Q8WWA1 233 aa5.46□□□□□ -1.54
SNORA40.12-201ENST00000516329 FMNL2Q96PY5 1086 aa5.46□□□□□ -1.54
SNORA40.12-201ENST00000516329 ALPK1Q96QP1 1244 aa5.46□□□□□ -1.54
SNORA40.12-201ENST00000516329 FERD3LQ96RJ6 166 aa5.46□□□□□ -1.54
SNORA40.12-201ENST00000516329 GPR62Q9BZJ7 368 aa5.46□□□□□ -1.54
SNORA40.12-201ENST00000516329 CNNM2Q9H8M5 875 aa5.46□□□□□ -1.54
SNORA40.12-201ENST00000516329 CARMIL2Q6F5E8 1435 aa5.46□□□□□ -1.54
SNORA40.12-201ENST00000516329 DNAJC25-GNG10A0A024R161 153 aa5.45□□□□□ -1.54
SNORA40.12-201ENST00000516329 SRFP11831 508 aa5.45□□□□□ -1.54
SNORA40.12-201ENST00000516329 NME1P15531 152 aaKnown RBP5.45□□□□□ -1.54
SNORA40.12-201ENST00000516329 HK2P52789 917 aa5.45□□□□□ -1.54
SNORA40.12-201ENST00000516329 RNF4P78317 190 aa5.45□□□□□ -1.54
SNORA40.12-201ENST00000516329 HDLBPQ00341 1268 aaKnown RBP5.45□□□□□ -1.54
SNORA40.12-201ENST00000516329 EGR3Q06889 387 aa5.45□□□□□ -1.54
SNORA40.12-201ENST00000516329 CLEC16AQ2KHT3 1053 aa5.45□□□□□ -1.54
SNORA40.12-201ENST00000516329 GAB4Q2WGN9 574 aa5.45□□□□□ -1.54
SNORA40.12-201ENST00000516329 RALGPS1Q5JS13 557 aa5.45□□□□□ -1.54
SNORA40.12-201ENST00000516329 FYB2Q5VWT5 728 aa5.45□□□□□ -1.54
SNORA40.12-201ENST00000516329 CDCP2Q5VXM1 449 aa5.45□□□□□ -1.54
SNORA40.12-201ENST00000516329 FBXW10Q5XX13 1052 aa5.45□□□□□ -1.54
SNORA40.12-201ENST00000516329 TTC6Q86TZ1 520 aa5.45□□□□□ -1.54
SNORA40.12-201ENST00000516329 TSPYL5Q86VY4 417 aaPredicted RBP5.45□□□□□ -1.54
SNORA40.12-201ENST00000516329 METTL16Q86W50 562 aaKnown RBP5.45□□□□□ -1.54
SNORA40.12-201ENST00000516329 C19orf73Q9NVV2 129 aa5.45□□□□□ -1.54
SNORA40.12-201ENST00000516329 PPT2Q9UMR5 302 aa5.45□□□□□ -1.54
SNORA40.12-201ENST00000516329 CCDC9Q9Y3X0 531 aaKnown RBP5.45□□□□□ -1.54
SNORA40.12-201ENST00000516329 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.45□□□□□ -1.54
SNORA40.12-201ENST00000516329 MEIS3P2A8K0S8 358 aa5.44□□□□□ -1.54
SNORA40.12-201ENST00000516329 CLEC3AO75596 197 aa5.44□□□□□ -1.54
SNORA40.12-201ENST00000516329 TXKP42681 527 aa5.44□□□□□ -1.54
SNORA40.12-201ENST00000516329 PAK2Q13177 524 aa5.44□□□□□ -1.54
SNORA40.12-201ENST00000516329 KCNMB1Q16558 191 aa5.44□□□□□ -1.54
SNORA40.12-201ENST00000516329 LRRFIP1Q32MZ4 808 aaKnown RBP5.44□□□□□ -1.54
SNORA40.12-201ENST00000516329 OGFOD2Q6N063 350 aa5.44□□□□□ -1.54
SNORA40.12-201ENST00000516329 CCDC81Q6ZN84 652 aa5.44□□□□□ -1.54
SNORA40.12-201ENST00000516329 ZSWIM9Q86XI8 627 aa5.44□□□□□ -1.54
SNORA40.12-201ENST00000516329 NT5DC4Q86YG4 428 aa5.44□□□□□ -1.54
SNORA40.12-201ENST00000516329 ZNF654Q8IZM8 581 aa5.44□□□□□ -1.54
SNORA40.12-201ENST00000516329 VWCEQ96DN2 955 aa5.44□□□□□ -1.54
SNORA40.12-201ENST00000516329 SLC6A18Q96N87 628 aa5.44□□□□□ -1.54
SNORA40.12-201ENST00000516329 KRTAP9-2Q9BYQ4 174 aa5.44□□□□□ -1.54
SNORA40.12-201ENST00000516329 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.44□□□□□ -1.54
SNORA40.12-201ENST00000516329 ASCC2Q9H1I8 757 aaPredicted RBP5.44□□□□□ -1.54
SNORA40.12-201ENST00000516329 ZNRF3Q9ULT6 936 aa5.44□□□□□ -1.54
SNORA40.12-201ENST00000516329 PCDHA11Q9Y5I1 949 aa5.44□□□□□ -1.54
SNORA40.12-201ENST00000516329 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.43□□□□□ -1.54
SNORA40.12-201ENST00000516329 AFMP43652 599 aa5.43□□□□□ -1.54
SNORA40.12-201ENST00000516329 NMIQ13287 307 aaPredicted RBP5.43□□□□□ -1.54
SNORA40.12-201ENST00000516329 SNW1Q13573 536 aaKnown RBP5.43□□□□□ -1.54
SNORA40.12-201ENST00000516329 NBPF12Q5TAG4 269 aaPredicted RBP5.43□□□□□ -1.54
SNORA40.12-201ENST00000516329 TMC3Q7Z5M5 1100 aa5.43□□□□□ -1.54
SNORA40.12-201ENST00000516329 TMEM192Q8IY95 271 aa5.43□□□□□ -1.54
SNORA40.12-201ENST00000516329 KIRREL1Q96J84 757 aa5.43□□□□□ -1.54
SNORA40.12-201ENST00000516329 SLC9A7Q96T83 725 aa5.43□□□□□ -1.54
SNORA40.12-201ENST00000516329 MKRN2Q9H000 416 aaKnown RBP5.43□□□□□ -1.54
SNORA40.12-201ENST00000516329 ADAMTS10Q9H324 1103 aa5.43□□□□□ -1.54
SNORA40.12-201ENST00000516329 TMEM59LQ9UK28 342 aa5.43□□□□□ -1.54
SNORA40.12-201ENST00000516329 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.43□□□□□ -1.54
SNORA40.12-201ENST00000516329 KRTAP9-6A0A140TA67 174 aa5.42□□□□□ -1.54
SNORA40.12-201ENST00000516329 ACRP10323 421 aa5.42□□□□□ -1.54
SNORA40.12-201ENST00000516329 GDNFP39905 211 aa5.42□□□□□ -1.54
SNORA40.12-201ENST00000516329 ERVFC1P60507 584 aa5.42□□□□□ -1.54
SNORA40.12-201ENST00000516329 HDAC8Q9BY41 377 aa5.42□□□□□ -1.54
SNORA40.12-201ENST00000516329 GINM1Q9NU53 330 aa5.42□□□□□ -1.54
SNORA40.12-201ENST00000516329 MINPP1Q9UNW1 487 aa5.42□□□□□ -1.54
SNORA40.12-201ENST00000516329 MEIS1O00470 390 aa5.41□□□□□ -1.54
SNORA40.12-201ENST00000516329 TNFRSF10CO14798 259 aa5.41□□□□□ -1.54
SNORA40.12-201ENST00000516329 IMPDH2P12268 514 aa5.41□□□□□ -1.54
SNORA40.12-201ENST00000516329 RAD51AP2Q09MP3 1159 aa5.41□□□□□ -1.54
SNORA40.12-201ENST00000516329 NBPF9Q3BBW0 867 aa5.41□□□□□ -1.54
SNORA40.12-201ENST00000516329 TDRD10Q5VZ19 366 aaKnown RBP5.41□□□□□ -1.54
SNORA40.12-201ENST00000516329 RUFY4Q6ZNE9 571 aa5.41□□□□□ -1.54
SNORA40.12-201ENST00000516329 ZNF428Q96B54 188 aa5.41□□□□□ -1.54
SNORA40.12-201ENST00000516329 GPRASP2Q96D09 838 aa5.41□□□□□ -1.54
SNORA40.12-201ENST00000516329 CCDC120Q96HB5 630 aa5.41□□□□□ -1.54
SNORA40.12-201ENST00000516329 EFR3BQ9Y2G0 817 aa5.41□□□□□ -1.54
SNORA40.12-201ENST00000516329 ZNF503-AS2A6NEH8 195 aa5.4□□□□□ -1.54
SNORA40.12-201ENST00000516329 PRAMEF1O95521 474 aa5.4□□□□□ -1.54
SNORA40.12-201ENST00000516329 RAC2P15153 192 aa5.4□□□□□ -1.54
SNORA40.12-201ENST00000516329 TRHRP34981 398 aaPredicted RBP5.4□□□□□ -1.54
SNORA40.12-201ENST00000516329 CCNFP41002 786 aa5.4□□□□□ -1.54
SNORA40.12-201ENST00000516329 TEKQ02763 1124 aa5.4□□□□□ -1.54
SNORA40.12-201ENST00000516329 TMEM67Q5HYA8 995 aa5.4□□□□□ -1.54
SNORA40.12-201ENST00000516329 LSRQ86X29 649 aaPredicted RBP5.4□□□□□ -1.54
SNORA40.12-201ENST00000516329 ABHD4Q8TB40 342 aa5.4□□□□□ -1.54
SNORA40.12-201ENST00000516329 SYTL5Q8TDW5 730 aaPredicted RBP5.4□□□□□ -1.54
SNORA40.12-201ENST00000516329 LIN37Q96GY3 246 aaPredicted RBP5.4□□□□□ -1.54
SNORA40.12-201ENST00000516329 FOXP3Q9BZS1 431 aa5.4□□□□□ -1.54
SNORA40.12-201ENST00000516329 PRDM14Q9GZV8 571 aa5.4□□□□□ -1.54
SNORA40.12-201ENST00000516329 FAM86C1Q9NVL1 165 aa5.4□□□□□ -1.54
SNORA40.12-201ENST00000516329 GFOD1Q9NXC2 390 aa5.4□□□□□ -1.54
SNORA40.12-201ENST00000516329 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.4□□□□□ -1.54
SNORA40.12-201ENST00000516329 FBXL21Q9UKT6 434 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms