RNA–Protein interactions for RNA: ENST00000515981.1

SCARNA16-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16-201ENST00000515981 SENP2Q9HC62 589 aa11.46□□□□□ -0.57
SCARNA16-201ENST00000515981 TCP11L1Q9NUJ3 509 aa11.46□□□□□ -0.57
SCARNA16-201ENST00000515981 SNX14Q9Y5W7 946 aa11.46□□□□□ -0.57
SCARNA16-201ENST00000515981 GREB1LQ9C091 1923 aaPredicted RBP11.46□□□□□ -0.58
SCARNA16-201ENST00000515981 PLIN4Q96Q06 1357 aa11.45□□□□□ -0.58
SCARNA16-201ENST00000515981 F5H6K3 240 aa11.45□□□□□ -0.58
SCARNA16-201ENST00000515981 FOXN1O15353 648 aa11.45□□□□□ -0.58
SCARNA16-201ENST00000515981 ECM2O94769 699 aaPredicted RBP11.45□□□□□ -0.58
SCARNA16-201ENST00000515981 NDUFB10O96000 172 aa11.45□□□□□ -0.58
SCARNA16-201ENST00000515981 VCAM1P19320 739 aa11.45□□□□□ -0.58
SCARNA16-201ENST00000515981 USP14P54578 494 aa11.45□□□□□ -0.58
SCARNA16-201ENST00000515981 KLRC3Q07444 240 aa11.45□□□□□ -0.58
SCARNA16-201ENST00000515981 CRHR2Q13324 411 aa11.45□□□□□ -0.58
SCARNA16-201ENST00000515981 TAF1CQ15572 869 aaPredicted RBP11.45□□□□□ -0.58
SCARNA16-201ENST00000515981 OTUD7BQ6GQQ9 843 aa11.45□□□□□ -0.58
SCARNA16-201ENST00000515981 SAMD1Q6SPF0 538 aaPredicted RBP11.45□□□□□ -0.58
SCARNA16-201ENST00000515981 RALYLQ86SE5 291 aaKnown RBP11.45□□□□□ -0.58
SCARNA16-201ENST00000515981 PROCA1Q8NCQ7 364 aaPredicted RBP11.45□□□□□ -0.58
SCARNA16-201ENST00000515981 TCEANC2Q96MN5 208 aa11.45□□□□□ -0.58
SCARNA16-201ENST00000515981 ZSCAN10Q96SZ4 725 aaPredicted RBP11.45□□□□□ -0.58
SCARNA16-201ENST00000515981 P2RX7Q99572 595 aaKnown RBP11.45□□□□□ -0.58
SCARNA16-201ENST00000515981 BEGAINQ9BUH8 593 aa11.45□□□□□ -0.58
SCARNA16-201ENST00000515981 RPAP3Q9H6T3 665 aaPredicted RBP11.45□□□□□ -0.58
SCARNA16-201ENST00000515981 VCPKMTQ9H867 229 aa11.45□□□□□ -0.58
SCARNA16-201ENST00000515981 CNNM2Q9H8M5 875 aa11.45□□□□□ -0.58
SCARNA16-201ENST00000515981 AGTPBP1Q9UPW5 1226 aa11.45□□□□□ -0.58
SCARNA16-201ENST00000515981 PRC1O43663 620 aa11.44□□□□□ -0.58
SCARNA16-201ENST00000515981 MCCP23508 829 aa11.44□□□□□ -0.58
SCARNA16-201ENST00000515981 NOVP48745 357 aa11.44□□□□□ -0.58
SCARNA16-201ENST00000515981 TSGA10IPQ3SY00 556 aa11.44□□□□□ -0.58
SCARNA16-201ENST00000515981 FAM83BQ5T0W9 1011 aa11.44□□□□□ -0.58
SCARNA16-201ENST00000515981 RNF20Q5VTR2 975 aa11.44□□□□□ -0.58
SCARNA16-201ENST00000515981 SLFN13Q68D06 897 aa11.44□□□□□ -0.58
SCARNA16-201ENST00000515981 ENAHQ8N8S7 591 aaPredicted RBP11.44□□□□□ -0.58
SCARNA16-201ENST00000515981 C12orf42Q96LP6 360 aa11.44□□□□□ -0.58
SCARNA16-201ENST00000515981 ASCC2Q9H1I8 757 aaPredicted RBP11.44□□□□□ -0.58
SCARNA16-201ENST00000515981 FBXO28Q9NVF7 368 aa11.44□□□□□ -0.58
SCARNA16-201ENST00000515981 CPA4Q9UI42 421 aa11.44□□□□□ -0.58
SCARNA16-201ENST00000515981 THSD7BQ9C0I4 1608 aa11.44□□□□□ -0.58
SCARNA16-201ENST00000515981 MYH4Q9Y623 1939 aa11.44□□□□□ -0.58
SCARNA16-201ENST00000515981 TNKSO95271 1327 aa11.43□□□□□ -0.58
SCARNA16-201ENST00000515981 USP17L15C9J2P7 530 aa11.43□□□□□ -0.58
SCARNA16-201ENST00000515981 USP17L13C9JLJ4 530 aa11.43□□□□□ -0.58
SCARNA16-201ENST00000515981 USP17L11C9JVI0 530 aa11.43□□□□□ -0.58
SCARNA16-201ENST00000515981 USP17L18D6R9N7 530 aa11.43□□□□□ -0.58
SCARNA16-201ENST00000515981 USP17L22D6RA61 530 aa11.43□□□□□ -0.58
SCARNA16-201ENST00000515981 USP17L17D6RBQ6 530 aa11.43□□□□□ -0.58
SCARNA16-201ENST00000515981 USP17L19D6RCP7 530 aa11.43□□□□□ -0.58
SCARNA16-201ENST00000515981 USP17L20D6RJB6 530 aa11.43□□□□□ -0.58
SCARNA16-201ENST00000515981 IFIT3O14879 490 aaKnown RBP11.43□□□□□ -0.58
SCARNA16-201ENST00000515981 CA12O43570 354 aa11.43□□□□□ -0.58
SCARNA16-201ENST00000515981 TOP1P11387 765 aaKnown RBP11.43□□□□□ -0.58
SCARNA16-201ENST00000515981 ZKSCAN1P17029 563 aaPredicted RBP11.43□□□□□ -0.58
SCARNA16-201ENST00000515981 USP17L24Q0WX57 530 aa11.43□□□□□ -0.58
SCARNA16-201ENST00000515981 SEC23AQ15436 765 aa11.43□□□□□ -0.58
SCARNA16-201ENST00000515981 POTEEQ6S8J3 1075 aa11.43□□□□□ -0.58
SCARNA16-201ENST00000515981 CATSPERGQ6ZRH7 1159 aa11.43□□□□□ -0.58
SCARNA16-201ENST00000515981 IQCA1Q86XH1 822 aa11.43□□□□□ -0.58
SCARNA16-201ENST00000515981 IGDCC4Q8TDY8 1250 aa11.43□□□□□ -0.58
SCARNA16-201ENST00000515981 JAKMIP1Q96N16 626 aaKnown RBP11.43□□□□□ -0.58
SCARNA16-201ENST00000515981 NEK1Q96PY6 1258 aa11.43□□□□□ -0.58
SCARNA16-201ENST00000515981 UBAC1Q9BSL1 405 aa11.43□□□□□ -0.58
SCARNA16-201ENST00000515981 TANGO6Q9C0B7 1094 aa11.43□□□□□ -0.58
SCARNA16-201ENST00000515981 SH2D4AQ9H788 454 aa11.43□□□□□ -0.58
SCARNA16-201ENST00000515981 ZFYVE28Q9HCC9 887 aa11.43□□□□□ -0.58
SCARNA16-201ENST00000515981 GOPCQ9HD26 462 aa11.43□□□□□ -0.58
SCARNA16-201ENST00000515981 ISY1Q9ULR0 285 aaKnown RBP11.43□□□□□ -0.58
SCARNA16-201ENST00000515981 ALDH1A1P00352 501 aa11.42□□□□□ -0.58
SCARNA16-201ENST00000515981 HSPA8P11142 646 aaKnown RBP11.42□□□□□ -0.58
SCARNA16-201ENST00000515981 OSBPP22059 807 aa11.42□□□□□ -0.58
SCARNA16-201ENST00000515981 HOXA7P31268 230 aaPredicted RBP11.42□□□□□ -0.58
SCARNA16-201ENST00000515981 MCM5P33992 734 aa11.42□□□□□ -0.58
SCARNA16-201ENST00000515981 LBX1P52954 281 aa11.42□□□□□ -0.58
SCARNA16-201ENST00000515981 EXOSC10Q01780 885 aaKnown RBP11.42□□□□□ -0.58
SCARNA16-201ENST00000515981 TMEM67Q5HYA8 995 aa11.42□□□□□ -0.58
SCARNA16-201ENST00000515981 KCTD1Q719H9 257 aa11.42□□□□□ -0.58
SCARNA16-201ENST00000515981 DGKHQ86XP1 1220 aa11.42□□□□□ -0.58
SCARNA16-201ENST00000515981 GMCL1P1Q8NEA9 526 aa11.42□□□□□ -0.58
SCARNA16-201ENST00000515981 ANKS1AQ92625 1134 aa11.42□□□□□ -0.58
SCARNA16-201ENST00000515981 TTC14Q96N46 770 aa11.42□□□□□ -0.58
SCARNA16-201ENST00000515981 CASP8AP2Q9UKL3 1982 aa11.41□□□□□ -0.58
SCARNA16-201ENST00000515981 FRMPD2Q68DX3 1309 aaPredicted RBP11.41□□□□□ -0.58
SCARNA16-201ENST00000515981 WDR46O15213 610 aaKnown RBP11.41□□□□□ -0.58
SCARNA16-201ENST00000515981 GOLGA8HP0CJ92 632 aa11.41□□□□□ -0.58
SCARNA16-201ENST00000515981 HERVK_113P62684 666 aa11.41□□□□□ -0.58
SCARNA16-201ENST00000515981 IRX3P78415 501 aaPredicted RBP11.41□□□□□ -0.58
SCARNA16-201ENST00000515981 CAP1Q01518 475 aa11.41□□□□□ -0.58
SCARNA16-201ENST00000515981 PABPC4Q13310 644 aaKnown RBP eCLIP11.41□□□□□ -0.58
SCARNA16-201ENST00000515981 KRT32Q14532 448 aa11.41□□□□□ -0.58
SCARNA16-201ENST00000515981 CCDC178Q5BJE1 867 aa11.41□□□□□ -0.58
SCARNA16-201ENST00000515981 IFIT1BQ5T764 474 aaKnown RBP11.41□□□□□ -0.58
SCARNA16-201ENST00000515981 TTBK2Q6IQ55 1244 aa11.41□□□□□ -0.58
SCARNA16-201ENST00000515981 DHX32Q7L7V1 743 aaKnown RBP11.41□□□□□ -0.58
SCARNA16-201ENST00000515981 RAB11FIP4Q86YS3 637 aa11.41□□□□□ -0.58
SCARNA16-201ENST00000515981 LPAR1Q92633 364 aa11.41□□□□□ -0.58
SCARNA16-201ENST00000515981 PARK7Q99497 189 aaKnown RBP11.41□□□□□ -0.58
SCARNA16-201ENST00000515981 KAT14Q9H8E8 782 aa11.41□□□□□ -0.58
SCARNA16-201ENST00000515981 GPCPD1Q9NPB8 672 aa11.41□□□□□ -0.58
SCARNA16-201ENST00000515981 SAGE1Q9NXZ1 904 aa11.41□□□□□ -0.58
SCARNA16-201ENST00000515981 SLC45A1Q9Y2W3 748 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms