RNA–Protein interactions for RNA: ENST00000515943.1

RNU4-29P-201, Transcript of RNA, U4 small nuclear 29, pseudogene, humanhuman

BASIC

Gene RNU4-29P, Length 174 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-29P-201ENST00000515943 ZP2Q05996 745 aa5.29□□□□□ -1.56
RNU4-29P-201ENST00000515943 ARSHQ5FYA8 562 aa5.29□□□□□ -1.56
RNU4-29P-201ENST00000515943 GK5Q6ZS86 529 aa5.29□□□□□ -1.56
RNU4-29P-201ENST00000515943 PHACTR4Q8IZ21 702 aa5.29□□□□□ -1.56
RNU4-29P-201ENST00000515943 DTWD2Q8NBA8 298 aa5.29□□□□□ -1.56
RNU4-29P-201ENST00000515943 LRRN4CLQ8ND94 238 aa5.29□□□□□ -1.56
RNU4-29P-201ENST00000515943 PI4K2BQ8TCG2 481 aa5.29□□□□□ -1.56
RNU4-29P-201ENST00000515943 KREMEN1Q96MU8 473 aa5.29□□□□□ -1.56
RNU4-29P-201ENST00000515943 KIF2CQ99661 725 aa5.29□□□□□ -1.56
RNU4-29P-201ENST00000515943 ASPNQ9BXN1 380 aa5.29□□□□□ -1.56
RNU4-29P-201ENST00000515943 RC3H2Q9HBD1 1191 aaKnown RBP5.29□□□□□ -1.56
RNU4-29P-201ENST00000515943 LMCD1Q9NZU5 365 aa5.29□□□□□ -1.56
RNU4-29P-201ENST00000515943 DDX41Q9UJV9 622 aaKnown RBP5.29□□□□□ -1.56
RNU4-29P-201ENST00000515943 MEIS3P2A8K0S8 358 aa5.28□□□□□ -1.56
RNU4-29P-201ENST00000515943 UBOX5O94941 541 aa5.28□□□□□ -1.56
RNU4-29P-201ENST00000515943 PAPLNO95428 1278 aa5.28□□□□□ -1.56
RNU4-29P-201ENST00000515943 TNNI2P48788 182 aa5.28□□□□□ -1.56
RNU4-29P-201ENST00000515943 CDCP2Q5VXM1 449 aa5.28□□□□□ -1.56
RNU4-29P-201ENST00000515943 CARS2Q9HA77 564 aaKnown RBP5.28□□□□□ -1.56
RNU4-29P-201ENST00000515943 PRDM7Q9NQW5 492 aa5.28□□□□□ -1.56
RNU4-29P-201ENST00000515943 CCDC9Q9Y3X0 531 aaKnown RBP5.28□□□□□ -1.56
RNU4-29P-201ENST00000515943 LRRN2O75325 713 aa5.27□□□□□ -1.57
RNU4-29P-201ENST00000515943 SRFP11831 508 aa5.27□□□□□ -1.57
RNU4-29P-201ENST00000515943 RAG1P15918 1043 aa5.27□□□□□ -1.57
RNU4-29P-201ENST00000515943 JUNBP17275 347 aaPredicted RBP5.27□□□□□ -1.57
RNU4-29P-201ENST00000515943 POLR2BP30876 1174 aaKnown RBP5.27□□□□□ -1.57
RNU4-29P-201ENST00000515943 MCM4P33991 863 aa5.27□□□□□ -1.57
RNU4-29P-201ENST00000515943 HDLBPQ00341 1268 aaKnown RBP5.27□□□□□ -1.57
RNU4-29P-201ENST00000515943 KRTAP19-1Q8IUB9 90 aa5.27□□□□□ -1.57
RNU4-29P-201ENST00000515943 TMEM40Q8WWA1 233 aa5.27□□□□□ -1.57
RNU4-29P-201ENST00000515943 UBE2FQ969M7 185 aa5.27□□□□□ -1.57
RNU4-29P-201ENST00000515943 VWCEQ96DN2 955 aa5.27□□□□□ -1.57
RNU4-29P-201ENST00000515943 ATG4CQ96DT6 458 aa5.27□□□□□ -1.57
RNU4-29P-201ENST00000515943 GPR62Q9BZJ7 368 aa5.27□□□□□ -1.57
RNU4-29P-201ENST00000515943 DUSP15Q9H1R2 295 aaPredicted RBP5.27□□□□□ -1.57
RNU4-29P-201ENST00000515943 CNNM2Q9H8M5 875 aa5.27□□□□□ -1.57
RNU4-29P-201ENST00000515943 ZSWIM5Q9P217 1185 aa5.27□□□□□ -1.57
RNU4-29P-201ENST00000515943 KCNH3Q9ULD8 1083 aa5.27□□□□□ -1.57
RNU4-29P-201ENST00000515943 ZNRF3Q9ULT6 936 aa5.27□□□□□ -1.57
RNU4-29P-201ENST00000515943 PAX4O43316 350 aa5.26□□□□□ -1.57
RNU4-29P-201ENST00000515943 ESR1P03372 595 aa5.26□□□□□ -1.57
RNU4-29P-201ENST00000515943 GBP1P32455 592 aa5.26□□□□□ -1.57
RNU4-29P-201ENST00000515943 GAB4Q2WGN9 574 aa5.26□□□□□ -1.57
RNU4-29P-201ENST00000515943 NLRC3Q7RTR2 1065 aa5.26□□□□□ -1.57
RNU4-29P-201ENST00000515943 TMPRSS7Q7RTY8 843 aa5.26□□□□□ -1.57
RNU4-29P-201ENST00000515943 ATG4DQ86TL0 474 aaPredicted RBP5.26□□□□□ -1.57
RNU4-29P-201ENST00000515943 ZNF654Q8IZM8 581 aa5.26□□□□□ -1.57
RNU4-29P-201ENST00000515943 FLAD1Q8NFF5 587 aa5.26□□□□□ -1.57
RNU4-29P-201ENST00000515943 FMNL2Q96PY5 1086 aa5.26□□□□□ -1.57
RNU4-29P-201ENST00000515943 TRIT1Q9H3H1 467 aaKnown RBP5.26□□□□□ -1.57
RNU4-29P-201ENST00000515943 ANTXR1Q9H6X2 564 aa5.26□□□□□ -1.57
RNU4-29P-201ENST00000515943 WASH4PA8MWX3 477 aa5.25□□□□□ -1.57
RNU4-29P-201ENST00000515943 TNFRSF10CO14798 259 aa5.25□□□□□ -1.57
RNU4-29P-201ENST00000515943 NME1P15531 152 aaKnown RBP5.25□□□□□ -1.57
RNU4-29P-201ENST00000515943 RNF4P78317 190 aa5.25□□□□□ -1.57
RNU4-29P-201ENST00000515943 LRRFIP1Q32MZ4 808 aaKnown RBP5.25□□□□□ -1.57
RNU4-29P-201ENST00000515943 NT5DC4Q86YG4 428 aa5.25□□□□□ -1.57
RNU4-29P-201ENST00000515943 GPATCH2Q9NW75 528 aa5.25□□□□□ -1.57
RNU4-29P-201ENST00000515943 BIN1O00499 593 aa5.24□□□□□ -1.57
RNU4-29P-201ENST00000515943 IMPDH2P12268 514 aa5.24□□□□□ -1.57
RNU4-29P-201ENST00000515943 CCNFP41002 786 aa5.24□□□□□ -1.57
RNU4-29P-201ENST00000515943 PAK2Q13177 524 aa5.24□□□□□ -1.57
RNU4-29P-201ENST00000515943 TSPYL5Q86VY4 417 aaPredicted RBP5.24□□□□□ -1.57
RNU4-29P-201ENST00000515943 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.24□□□□□ -1.57
RNU4-29P-201ENST00000515943 C19orf73Q9NVV2 129 aa5.24□□□□□ -1.57
RNU4-29P-201ENST00000515943 CTNND2Q9UQB3 1225 aa5.24□□□□□ -1.57
RNU4-29P-201ENST00000515943 CFTRP13569 1480 aa5.24□□□□□ -1.57
RNU4-29P-201ENST00000515943 FANCD2Q9BXW9 1451 aa5.24□□□□□ -1.57
RNU4-29P-201ENST00000515943 URB2Q14146 1524 aaKnown RBP5.23□□□□□ -1.57
RNU4-29P-201ENST00000515943 SHISA3A0PJX4 238 aa5.23□□□□□ -1.57
RNU4-29P-201ENST00000515943 TPP2P29144 1249 aaPredicted RBP5.23□□□□□ -1.57
RNU4-29P-201ENST00000515943 CHMP4BP1P59074 171 aa5.23□□□□□ -1.57
RNU4-29P-201ENST00000515943 RAD51AP2Q09MP3 1159 aa5.23□□□□□ -1.57
RNU4-29P-201ENST00000515943 NBPF12Q5TAG4 269 aaPredicted RBP5.23□□□□□ -1.57
RNU4-29P-201ENST00000515943 C9orf131Q5VYM1 1079 aa5.23□□□□□ -1.57
RNU4-29P-201ENST00000515943 CREG2Q8IUH2 290 aa5.23□□□□□ -1.57
RNU4-29P-201ENST00000515943 ASIC4Q96FT7 647 aa5.23□□□□□ -1.57
RNU4-29P-201ENST00000515943 ALPK1Q96QP1 1244 aa5.23□□□□□ -1.57
RNU4-29P-201ENST00000515943 FERD3LQ96RJ6 166 aa5.23□□□□□ -1.57
RNU4-29P-201ENST00000515943 DUSP13Q9UII6 198 aa5.23□□□□□ -1.57
RNU4-29P-201ENST00000515943 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.23□□□□□ -1.57
RNU4-29P-201ENST00000515943 RNF114Q9Y508 228 aa5.23□□□□□ -1.57
RNU4-29P-201ENST00000515943 CEP164Q9UPV0 1460 aa5.23□□□□□ -1.57
RNU4-29P-201ENST00000515943 CARMIL2Q6F5E8 1435 aa5.23□□□□□ -1.57
RNU4-29P-201ENST00000515943 WIZO95785 1651 aa5.22□□□□□ -1.57
RNU4-29P-201ENST00000515943 CLEC3AO75596 197 aa5.22□□□□□ -1.57
RNU4-29P-201ENST00000515943 GJA8P48165 433 aa5.22□□□□□ -1.57
RNU4-29P-201ENST00000515943 COL9A2Q14055 689 aaPredicted RBP5.22□□□□□ -1.57
RNU4-29P-201ENST00000515943 LCE1DQ5T752 114 aa5.22□□□□□ -1.57
RNU4-29P-201ENST00000515943 TMEM192Q8IY95 271 aa5.22□□□□□ -1.57
RNU4-29P-201ENST00000515943 TAB3Q8N5C8 712 aaPredicted RBP5.22□□□□□ -1.57
RNU4-29P-201ENST00000515943 RBBP8NLQ8NC74 664 aaPredicted RBP5.22□□□□□ -1.57
RNU4-29P-201ENST00000515943 RASGRP4Q8TDF6 673 aa5.22□□□□□ -1.57
RNU4-29P-201ENST00000515943 GPRASP2Q96D09 838 aa5.22□□□□□ -1.57
RNU4-29P-201ENST00000515943 SLC9A7Q96T83 725 aa5.22□□□□□ -1.57
RNU4-29P-201ENST00000515943 GINM1Q9NU53 330 aa5.22□□□□□ -1.57
RNU4-29P-201ENST00000515943 SLAMF8Q9P0V8 285 aa5.22□□□□□ -1.57
RNU4-29P-201ENST00000515943 PPT2Q9UMR5 302 aa5.22□□□□□ -1.57
RNU4-29P-201ENST00000515943 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.22□□□□□ -1.57
RNU4-29P-201ENST00000515943 ACRP10323 421 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms