RNA–Protein interactions for RNA: ENST00000515752.5

SDHA-218, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-218ENST00000515752 PCDHB6Q9Y5E3 794 aa17.51■□□□□ 0.39
SDHA-218ENST00000515752 PLIN4Q96Q06 1357 aa17.5■□□□□ 0.39
SDHA-218ENST00000515752 PALM3A6NDB9 673 aaPredicted RBP17.5■□□□□ 0.39
SDHA-218ENST00000515752 NLRP12P59046 1061 aa17.5■□□□□ 0.39
SDHA-218ENST00000515752 STRIP1Q5VSL9 837 aa17.5■□□□□ 0.39
SDHA-218ENST00000515752 MSL1Q68DK7 614 aa17.5■□□□□ 0.39
SDHA-218ENST00000515752 CERS5Q8N5B7 392 aa17.5■□□□□ 0.39
SDHA-218ENST00000515752 SLC44A5Q8NCS7 719 aa17.5■□□□□ 0.39
SDHA-218ENST00000515752 TNFRSF25Q93038 417 aa17.5■□□□□ 0.39
SDHA-218ENST00000515752 TNS1Q9HBL0 1735 aaKnown RBP17.5■□□□□ 0.39
SDHA-218ENST00000515752 DDX60LQ5H9U9 1706 aaKnown RBP17.49■□□□□ 0.39
SDHA-218ENST00000515752 KIAA2012Q0VF49 1180 aa17.49■□□□□ 0.39
SDHA-218ENST00000515752 DOK7Q18PE1 504 aa17.49■□□□□ 0.39
SDHA-218ENST00000515752 KRBA2Q6ZNG9 492 aa17.49■□□□□ 0.39
SDHA-218ENST00000515752 CNNM3Q8NE01 707 aa17.49■□□□□ 0.39
SDHA-218ENST00000515752 SUPT20HQ8NEM7 779 aa17.49■□□□□ 0.39
SDHA-218ENST00000515752 CLIC6Q96NY7 704 aa17.49■□□□□ 0.39
SDHA-218ENST00000515752 SPZ1Q9BXG8 430 aa17.49■□□□□ 0.39
SDHA-218ENST00000515752 TRIM5Q9C035 493 aa17.49■□□□□ 0.39
SDHA-218ENST00000515752 TUBE1Q9UJT0 475 aa17.49■□□□□ 0.39
SDHA-218ENST00000515752 QSER1Q2KHR3 1735 aa17.49■□□□□ 0.39
SDHA-218ENST00000515752 hCG_1642624A0A1W2PR95 340 aa17.49■□□□□ 0.39
SDHA-218ENST00000515752 TPM4P67936 248 aa17.49■□□□□ 0.39
SDHA-218ENST00000515752 GABPAQ06546 454 aa17.49■□□□□ 0.39
SDHA-218ENST00000515752 NPY5RQ15761 445 aa17.49■□□□□ 0.39
SDHA-218ENST00000515752 C11orf57Q6ZUT1 292 aaPredicted RBP17.49■□□□□ 0.39
SDHA-218ENST00000515752 CCDC12Q8WUD4 166 aaPredicted RBP17.49■□□□□ 0.39
SDHA-218ENST00000515752 SHISA4Q96DD7 197 aa17.49■□□□□ 0.39
SDHA-218ENST00000515752 CAMKK2Q96RR4 588 aa17.49■□□□□ 0.39
SDHA-218ENST00000515752 USP40Q9NVE5 1235 aa17.49■□□□□ 0.39
SDHA-218ENST00000515752 MYH6P13533 1939 aa17.48■□□□□ 0.39
SDHA-218ENST00000515752 SMTNL1A8MU46 457 aa17.48■□□□□ 0.39
SDHA-218ENST00000515752 HLA-DOAP06340 250 aa17.48■□□□□ 0.39
SDHA-218ENST00000515752 PARP1P09874 1014 aaKnown RBP17.48■□□□□ 0.39
SDHA-218ENST00000515752 CDC25BP30305 580 aa17.48■□□□□ 0.39
SDHA-218ENST00000515752 PLA2G4DQ86XP0 818 aa17.48■□□□□ 0.39
SDHA-218ENST00000515752 ZDHHC15Q96MV8 337 aa17.48■□□□□ 0.39
SDHA-218ENST00000515752 PYM1Q9BRP8 204 aaKnown RBP17.48■□□□□ 0.39
SDHA-218ENST00000515752 SNED1Q8TER0 1413 aa17.48■□□□□ 0.39
SDHA-218ENST00000515752 AP5Z1O43299 807 aa17.47■□□□□ 0.39
SDHA-218ENST00000515752 TTC38Q5R3I4 469 aa17.47■□□□□ 0.39
SDHA-218ENST00000515752 BLIDQ8IZY5 108 aa17.47■□□□□ 0.39
SDHA-218ENST00000515752 DAGLBQ8NCG7 672 aa17.47■□□□□ 0.39
SDHA-218ENST00000515752 SERPINB13Q9UIV8 391 aa17.47■□□□□ 0.39
SDHA-218ENST00000515752 PCDHA4Q9UN74 947 aa17.47■□□□□ 0.39
SDHA-218ENST00000515752 COL11A2P13942 1736 aaPredicted RBP17.47■□□□□ 0.39
SDHA-218ENST00000515752 F8W031 263 aaPredicted RBP17.47■□□□□ 0.39
SDHA-218ENST00000515752 ZNF75DP51815 510 aa17.47■□□□□ 0.39
SDHA-218ENST00000515752 OLFM4Q6UX06 510 aa17.47■□□□□ 0.39
SDHA-218ENST00000515752 STAG2Q8N3U4 1231 aa17.47■□□□□ 0.39
SDHA-218ENST00000515752 DHX36Q9H2U1 1008 aaKnown RBP17.47■□□□□ 0.39
SDHA-218ENST00000515752 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.47■□□□□ 0.39
SDHA-218ENST00000515752 KLRF2D3W0D1 207 aa17.46■□□□□ 0.39
SDHA-218ENST00000515752 hCG_1984214I3L0E3 225 aa17.46■□□□□ 0.39
SDHA-218ENST00000515752 NPM3O75607 178 aaKnown RBP17.46■□□□□ 0.39
SDHA-218ENST00000515752 ATP2B1P20020 1258 aa17.46■□□□□ 0.39
SDHA-218ENST00000515752 PICALMQ13492 652 aa17.46■□□□□ 0.39
SDHA-218ENST00000515752 APOBEC3HQ6NTF7 200 aaKnown RBP17.46■□□□□ 0.39
SDHA-218ENST00000515752 C10orf71Q711Q0 1435 aa17.46■□□□□ 0.39
SDHA-218ENST00000515752 DHX40Q8IX18 779 aaKnown RBP17.46■□□□□ 0.39
SDHA-218ENST00000515752 ZNF713Q8N859 430 aaPredicted RBP17.46■□□□□ 0.39
SDHA-218ENST00000515752 CEP95Q96GE4 821 aa17.46■□□□□ 0.39
SDHA-218ENST00000515752 MRFAP1L1Q96HT8 127 aa17.46■□□□□ 0.39
SDHA-218ENST00000515752 OSBPL5Q9H0X9 879 aaPredicted RBP17.46■□□□□ 0.39
SDHA-218ENST00000515752 EHD4Q9H223 541 aa17.46■□□□□ 0.39
SDHA-218ENST00000515752 BARHL2Q9NY43 387 aa17.46■□□□□ 0.39
SDHA-218ENST00000515752 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.46■□□□□ 0.39
SDHA-218ENST00000515752 IKBKBO14920 756 aa17.45■□□□□ 0.38
SDHA-218ENST00000515752 CRKP46108 304 aa17.45■□□□□ 0.38
SDHA-218ENST00000515752 EZH2Q15910 746 aaKnown RBP17.45■□□□□ 0.38
SDHA-218ENST00000515752 LONRF3Q496Y0 759 aa17.45■□□□□ 0.38
SDHA-218ENST00000515752 CDC42EP5Q6NZY7 148 aa17.45■□□□□ 0.38
SDHA-218ENST00000515752 CCDC17Q96LX7 622 aa17.45■□□□□ 0.38
SDHA-218ENST00000515752 MTMR4Q9NYA4 1195 aa17.45■□□□□ 0.38
SDHA-218ENST00000515752 CDK5RAP2Q96SN8 1893 aa17.45■□□□□ 0.38
SDHA-218ENST00000515752 ATP2C1P98194 919 aaPredicted RBP17.44■□□□□ 0.38
SDHA-218ENST00000515752 ARL6IP4Q66PJ3 421 aaKnown RBP17.44■□□□□ 0.38
SDHA-218ENST00000515752 C7orf43Q8WVR3 580 aa17.44■□□□□ 0.38
SDHA-218ENST00000515752 RRP36Q96EU6 259 aaKnown RBP17.44■□□□□ 0.38
SDHA-218ENST00000515752 DBNDD1Q9H9R9 158 aa17.44■□□□□ 0.38
SDHA-218ENST00000515752 FOCADQ5VW36 1801 aa17.44■□□□□ 0.38
SDHA-218ENST00000515752 MYO1BO43795 1136 aa17.44■□□□□ 0.38
SDHA-218ENST00000515752 ECE2O60344 883 aa17.44■□□□□ 0.38
SDHA-218ENST00000515752 SCNN1DP51172 638 aa17.44■□□□□ 0.38
SDHA-218ENST00000515752 DPCR1Q3MIW9 517 aa17.44■□□□□ 0.38
SDHA-218ENST00000515752 ASPRV1Q53RT3 343 aa17.44■□□□□ 0.38
SDHA-218ENST00000515752 DACT2Q5SW24 774 aa17.44■□□□□ 0.38
SDHA-218ENST00000515752 PIK3AP1Q6ZUJ8 805 aa17.44■□□□□ 0.38
SDHA-218ENST00000515752 DRC7Q8IY82 874 aa17.44■□□□□ 0.38
SDHA-218ENST00000515752 TRIML1Q8N9V2 468 aa17.44■□□□□ 0.38
SDHA-218ENST00000515752 CSRNP2Q9H175 543 aa17.44■□□□□ 0.38
SDHA-218ENST00000515752 ANO8Q9HCE9 1232 aaPredicted RBP17.44■□□□□ 0.38
SDHA-218ENST00000515752 SEC63Q9UGP8 760 aaKnown RBP17.44■□□□□ 0.38
SDHA-218ENST00000515752 SERPINA10Q9UK55 444 aa17.44■□□□□ 0.38
SDHA-218ENST00000515752 MYH1P12882 1939 aa17.44■□□□□ 0.38
SDHA-218ENST00000515752 CCDC194A0A1B0GVG4 234 aa17.43■□□□□ 0.38
SDHA-218ENST00000515752 POLR2DO15514 142 aaKnown RBP17.43■□□□□ 0.38
SDHA-218ENST00000515752 GNA11P29992 359 aa17.43■□□□□ 0.38
SDHA-218ENST00000515752 EN1Q05925 392 aaPredicted RBP17.43■□□□□ 0.38
SDHA-218ENST00000515752 EARS2Q5JPH6 523 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms