RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 MAGEA9P43362 315 aa15.27■□□□□ 0.03
SH3TC1-225ENST00000515682 KCNQ4P56696 695 aa15.27■□□□□ 0.03
SH3TC1-225ENST00000515682 TAF4BQ92750 862 aa15.27■□□□□ 0.03
SH3TC1-225ENST00000515682 PDE8AO60658 829 aa15.26■□□□□ 0.03
SH3TC1-225ENST00000515682 SRGAP2O75044 1071 aa15.26■□□□□ 0.03
SH3TC1-225ENST00000515682 RESP18Q5W5W9 173 aa15.26■□□□□ 0.03
SH3TC1-225ENST00000515682 NELFBQ8WX92 580 aa15.26■□□□□ 0.03
SH3TC1-225ENST00000515682 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.26■□□□□ 0.03
SH3TC1-225ENST00000515682 RMND1Q9NWS8 449 aa15.26■□□□□ 0.03
SH3TC1-225ENST00000515682 TRPC5Q9UL62 973 aaPredicted RBP15.26■□□□□ 0.03
SH3TC1-225ENST00000515682 OVOS2A0A0J9YW53 1432 aa15.26■□□□□ 0.03
SH3TC1-225ENST00000515682 TFRCP02786 760 aaKnown RBP15.26■□□□□ 0.03
SH3TC1-225ENST00000515682 CDC25AP30304 524 aa15.26■□□□□ 0.03
SH3TC1-225ENST00000515682 HPDP32754 393 aaPredicted RBP15.26■□□□□ 0.03
SH3TC1-225ENST00000515682 TBC1D8BQ0IIM8 1120 aa15.26■□□□□ 0.03
SH3TC1-225ENST00000515682 OVOS2Q6IE36 1432 aa15.26■□□□□ 0.03
SH3TC1-225ENST00000515682 ZBTB1Q9Y2K1 713 aa15.26■□□□□ 0.03
SH3TC1-225ENST00000515682 ZRANB2O95218 330 aaKnown RBP eCLIP15.26■□□□□ 0.03
SH3TC1-225ENST00000515682 CCDC93Q567U6 631 aa15.26■□□□□ 0.03
SH3TC1-225ENST00000515682 IFIT1BQ5T764 474 aaKnown RBP15.26■□□□□ 0.03
SH3TC1-225ENST00000515682 KIF20BQ96Q89 1820 aa15.26■□□□□ 0.03
SH3TC1-225ENST00000515682 MUM1L1Q5H9M0 696 aa15.26■□□□□ 0.03
SH3TC1-225ENST00000515682 RIN2Q8WYP3 895 aaPredicted RBP15.26■□□□□ 0.03
SH3TC1-225ENST00000515682 EPSTI1Q96J88 318 aa15.26■□□□□ 0.03
SH3TC1-225ENST00000515682 LUC7LQ9NQ29 371 aaKnown RBP15.26■□□□□ 0.03
SH3TC1-225ENST00000515682 CAPN7Q9Y6W3 813 aa15.26■□□□□ 0.03
SH3TC1-225ENST00000515682 KCTD16Q68DU8 428 aa15.25■□□□□ 0.03
SH3TC1-225ENST00000515682 GBP6Q6ZN66 633 aa15.25■□□□□ 0.03
SH3TC1-225ENST00000515682 ILDR1Q86SU0 546 aaPredicted RBP15.25■□□□□ 0.03
SH3TC1-225ENST00000515682 MKNK2Q9HBH9 465 aa15.25■□□□□ 0.03
SH3TC1-225ENST00000515682 ARID5AQ03989 594 aa15.25■□□□□ 0.03
SH3TC1-225ENST00000515682 SF3A3Q12874 501 aaKnown RBP eCLIP15.25■□□□□ 0.032e-6■■■■□ 26.7
SH3TC1-225ENST00000515682 CFAP58Q5T655 872 aa15.25■□□□□ 0.03
SH3TC1-225ENST00000515682 CNBD1Q8NA66 436 aa15.25■□□□□ 0.03
SH3TC1-225ENST00000515682 OR8K1Q8NGG5 319 aa15.25■□□□□ 0.03
SH3TC1-225ENST00000515682 KCNJ18B7U540 433 aa15.25■□□□□ 0.03
SH3TC1-225ENST00000515682 VAV2P52735 878 aa15.25■□□□□ 0.03
SH3TC1-225ENST00000515682 KCNJ12Q14500 433 aa15.25■□□□□ 0.03
SH3TC1-225ENST00000515682 RAD9BQ6WBX8 426 aa15.25■□□□□ 0.03
SH3TC1-225ENST00000515682 TAX1BP1Q86VP1 789 aa15.25■□□□□ 0.03
SH3TC1-225ENST00000515682 SYMPKQ92797 1274 aaKnown RBP15.25■□□□□ 0.03
SH3TC1-225ENST00000515682 MFAP3LO75121 409 aa15.24■□□□□ 0.03
SH3TC1-225ENST00000515682 PIK3AP1Q6ZUJ8 805 aa15.24■□□□□ 0.03
SH3TC1-225ENST00000515682 TRIML1Q8N9V2 468 aa15.24■□□□□ 0.03
SH3TC1-225ENST00000515682 PNKPQ96T60 521 aa15.24■□□□□ 0.03
SH3TC1-225ENST00000515682 HDAC6Q9UBN7 1215 aa15.24■□□□□ 0.03
SH3TC1-225ENST00000515682 CDC27P30260 824 aa15.24■□□□□ 0.03
SH3TC1-225ENST00000515682 MORC3Q14149 939 aa15.24■□□□□ 0.03
SH3TC1-225ENST00000515682 ESR2Q92731 530 aa15.24■□□□□ 0.03
SH3TC1-225ENST00000515682 PANX2Q96RD6 677 aa15.24■□□□□ 0.03
SH3TC1-225ENST00000515682 CAPS2Q9BXY5 557 aa15.24■□□□□ 0.03
SH3TC1-225ENST00000515682 KDM4FA0A1W2PPD8 638 aa15.24■□□□□ 0.03
SH3TC1-225ENST00000515682 CYP7A1P22680 504 aa15.24■□□□□ 0.03
SH3TC1-225ENST00000515682 MYCBPQ99417 103 aaPredicted RBP15.24■□□□□ 0.03
SH3TC1-225ENST00000515682 PXDNLA1KZ92 1463 aa15.24■□□□□ 0.03
SH3TC1-225ENST00000515682 PPFIA4O75335 1185 aa15.23■□□□□ 0.03
SH3TC1-225ENST00000515682 BMP15O95972 392 aa15.23■□□□□ 0.03
SH3TC1-225ENST00000515682 APBA3O96018 575 aa15.23■□□□□ 0.03
SH3TC1-225ENST00000515682 TMTC2Q8N394 836 aa15.23■□□□□ 0.03
SH3TC1-225ENST00000515682 CCDC51Q96ER9 411 aa15.23■□□□□ 0.03
SH3TC1-225ENST00000515682 ERCC5P28715 1186 aaPredicted RBP15.23■□□□□ 0.03
SH3TC1-225ENST00000515682 ASIC1P78348 528 aa15.23■□□□□ 0.03
SH3TC1-225ENST00000515682 TUBE1Q9UJT0 475 aa15.23■□□□□ 0.03
SH3TC1-225ENST00000515682 MAP2K2P36507 400 aa15.23■□□□□ 0.03
SH3TC1-225ENST00000515682 COPB1P53618 953 aaKnown RBP15.23■□□□□ 0.03
SH3TC1-225ENST00000515682 TTC38Q5R3I4 469 aa15.23■□□□□ 0.03
SH3TC1-225ENST00000515682 SCLT1Q96NL6 688 aa15.23■□□□□ 0.03
SH3TC1-225ENST00000515682 TRIM14Q14142 442 aa15.23■□□□□ 0.03
SH3TC1-225ENST00000515682 C8orf74Q6P047 294 aa15.23■□□□□ 0.03
SH3TC1-225ENST00000515682 NOA1Q8NC60 698 aaKnown RBP15.23■□□□□ 0.03
SH3TC1-225ENST00000515682 SECISBP2LQ93073 1101 aaKnown RBP15.23■□□□□ 0.03
SH3TC1-225ENST00000515682 CCDC114Q96M63 670 aa15.23■□□□□ 0.03
SH3TC1-225ENST00000515682 EXOC1Q9NV70 894 aa15.23■□□□□ 0.03
SH3TC1-225ENST00000515682 TMOD2Q9NZR1 351 aa15.23■□□□□ 0.03
SH3TC1-225ENST00000515682 LDHCP07864 332 aa15.22■□□□□ 0.03
SH3TC1-225ENST00000515682 CYB5R4Q7L1T6 521 aa15.22■□□□□ 0.03
SH3TC1-225ENST00000515682 EFCAB13Q8IY85 973 aa15.22■□□□□ 0.03
SH3TC1-225ENST00000515682 MB21D2Q8IYB1 491 aaPredicted RBP15.22■□□□□ 0.03
SH3TC1-225ENST00000515682 ANKRD13CQ8N6S4 541 aa15.22■□□□□ 0.03
SH3TC1-225ENST00000515682 CCDC113Q9H0I3 377 aa15.22■□□□□ 0.03
SH3TC1-225ENST00000515682 UBE2Q2LH0YL09 131 aa15.22■□□□□ 0.03
SH3TC1-225ENST00000515682 CRKLP46109 303 aaKnown RBP15.22■□□□□ 0.03
SH3TC1-225ENST00000515682 IFFO1Q0D2I5 559 aa15.22■□□□□ 0.03
SH3TC1-225ENST00000515682 FOXR1Q6PIV2 292 aa15.22■□□□□ 0.03
SH3TC1-225ENST00000515682 USP49Q70CQ1 688 aa15.22■□□□□ 0.03
SH3TC1-225ENST00000515682 DENND2AQ9ULE3 1009 aa15.22■□□□□ 0.03
SH3TC1-225ENST00000515682 TMCO5BA8MYB1 307 aa15.22■□□□□ 0.03
SH3TC1-225ENST00000515682 NF2P35240 595 aa15.22■□□□□ 0.03
SH3TC1-225ENST00000515682 GRIN1Q05586 938 aa15.22■□□□□ 0.03
SH3TC1-225ENST00000515682 C2orf54Q08AI8 447 aa15.22■□□□□ 0.03
SH3TC1-225ENST00000515682 TICAM2Q86XR7 235 aa15.22■□□□□ 0.03
SH3TC1-225ENST00000515682 CSGALNACT2Q8N6G5 542 aa15.22■□□□□ 0.03
SH3TC1-225ENST00000515682 JAG2Q9Y219 1238 aa15.22■□□□□ 0.03
SH3TC1-225ENST00000515682 DIP2AQ14689 1571 aa15.22■□□□□ 0.03
SH3TC1-225ENST00000515682 SH2B2O14492 632 aaPredicted RBP15.21■□□□□ 0.03
SH3TC1-225ENST00000515682 NOP2P46087 812 aaKnown RBP15.21■□□□□ 0.03
SH3TC1-225ENST00000515682 TBC1D10CQ8IV04 446 aa15.21■□□□□ 0.03
SH3TC1-225ENST00000515682 HAUS4Q9H6D7 363 aa15.21■□□□□ 0.03
SH3TC1-225ENST00000515682 POLD4Q9HCU8 107 aa15.21■□□□□ 0.03
SH3TC1-225ENST00000515682 CYP27A1Q02318 531 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms