RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 YDJCA8MPS7 323 aa17.77■□□□□ 0.44
THUMPD3-210ENST00000515662 VEGFAP15692 232 aaPredicted RBP17.77■□□□□ 0.44
THUMPD3-210ENST00000515662 SASS6Q6UVJ0 657 aa17.77■□□□□ 0.44
THUMPD3-210ENST00000515662 RTKN2Q8IZC4 609 aa17.77■□□□□ 0.44
THUMPD3-210ENST00000515662 PIBF1Q8WXW3 757 aa17.77■□□□□ 0.44
THUMPD3-210ENST00000515662 TRIM44Q96DX7 344 aaPredicted RBP17.77■□□□□ 0.44
THUMPD3-210ENST00000515662 CABP5Q9NP86 173 aa17.77■□□□□ 0.44
THUMPD3-210ENST00000515662 SERPINA10Q9UK55 444 aa17.77■□□□□ 0.44
THUMPD3-210ENST00000515662 SLC35G1Q2M3R5 365 aa17.76■□□□□ 0.43
THUMPD3-210ENST00000515662 TNFRSF25Q93038 417 aa17.76■□□□□ 0.43
THUMPD3-210ENST00000515662 BRMS1Q9HCU9 246 aa17.76■□□□□ 0.43
THUMPD3-210ENST00000515662 MYO3BQ8WXR4 1341 aa17.76■□□□□ 0.43
THUMPD3-210ENST00000515662 CUTAO60888 179 aa17.76■□□□□ 0.43
THUMPD3-210ENST00000515662 PFKFB1P16118 471 aa17.76■□□□□ 0.43
THUMPD3-210ENST00000515662 RBM5P52756 815 aaKnown RBP eCLIP17.76■□□□□ 0.43
THUMPD3-210ENST00000515662 SHC4Q6S5L8 630 aa17.76■□□□□ 0.43
THUMPD3-210ENST00000515662 ZFPM1Q8IX07 1006 aa17.76■□□□□ 0.43
THUMPD3-210ENST00000515662 LZTS2Q9BRK4 669 aa17.76■□□□□ 0.43
THUMPD3-210ENST00000515662 MTMR7Q9Y216 660 aa17.76■□□□□ 0.43
THUMPD3-210ENST00000515662 PCDHB6Q9Y5E3 794 aa17.76■□□□□ 0.43
THUMPD3-210ENST00000515662 IGKV6D-41A0A0C4DH26 115 aa17.75■□□□□ 0.43
THUMPD3-210ENST00000515662 FAM205CA6NFA0 338 aa17.75■□□□□ 0.43
THUMPD3-210ENST00000515662 HLA-DOAP06340 250 aa17.75■□□□□ 0.43
THUMPD3-210ENST00000515662 AKR1B1P15121 316 aa17.75■□□□□ 0.43
THUMPD3-210ENST00000515662 EARS2Q5JPH6 523 aaKnown RBP17.75■□□□□ 0.43
THUMPD3-210ENST00000515662 PSMD1Q99460 953 aa17.75■□□□□ 0.43
THUMPD3-210ENST00000515662 CYTH3O43739 400 aa17.75■□□□□ 0.43
THUMPD3-210ENST00000515662 SHMT1P34896 483 aa17.75■□□□□ 0.43
THUMPD3-210ENST00000515662 CACNB3P54284 484 aa17.75■□□□□ 0.43
THUMPD3-210ENST00000515662 ANO6Q4KMQ2 910 aa17.75■□□□□ 0.43
THUMPD3-210ENST00000515662 KRI1Q8N9T8 703 aaKnown RBP17.75■□□□□ 0.43
THUMPD3-210ENST00000515662 FAM200AQ8TCP9 573 aa17.75■□□□□ 0.43
THUMPD3-210ENST00000515662 CLIC6Q96NY7 704 aa17.75■□□□□ 0.43
THUMPD3-210ENST00000515662 IDI2Q9BXS1 227 aa17.75■□□□□ 0.43
THUMPD3-210ENST00000515662 EHD4Q9H223 541 aa17.75■□□□□ 0.43
THUMPD3-210ENST00000515662 MTMR4Q9NYA4 1195 aa17.75■□□□□ 0.43
THUMPD3-210ENST00000515662 FAM237AA0A1B0GTK4 181 aa17.74■□□□□ 0.43
THUMPD3-210ENST00000515662 ZNF202O95125 648 aa17.74■□□□□ 0.43
THUMPD3-210ENST00000515662 NLRP5P59047 1200 aa17.74■□□□□ 0.43
THUMPD3-210ENST00000515662 RESP18Q5W5W9 173 aa17.74■□□□□ 0.43
THUMPD3-210ENST00000515662 SH3GLB2Q9NR46 395 aa17.74■□□□□ 0.43
THUMPD3-210ENST00000515662 HPSEQ9Y251 543 aa17.74■□□□□ 0.43
THUMPD3-210ENST00000515662 KIF13BQ9NQT8 1826 aa17.74■□□□□ 0.43
THUMPD3-210ENST00000515662 KLRF2D3W0D1 207 aa17.74■□□□□ 0.43
THUMPD3-210ENST00000515662 PARP1P09874 1014 aaKnown RBP17.74■□□□□ 0.43
THUMPD3-210ENST00000515662 RASGRP2Q7LDG7 609 aa17.74■□□□□ 0.43
THUMPD3-210ENST00000515662 SDF4Q9BRK5 362 aa17.74■□□□□ 0.43
THUMPD3-210ENST00000515662 FAM198AQ9UFP1 575 aa17.74■□□□□ 0.43
THUMPD3-210ENST00000515662 CEP131Q9UPN4 1083 aa17.74■□□□□ 0.43
THUMPD3-210ENST00000515662 NPM3O75607 178 aaKnown RBP17.73■□□□□ 0.43
THUMPD3-210ENST00000515662 GOLGA8HP0CJ92 632 aa17.73■□□□□ 0.43
THUMPD3-210ENST00000515662 DHX36Q9H2U1 1008 aaKnown RBP17.73■□□□□ 0.43
THUMPD3-210ENST00000515662 FBXO2Q9UK22 296 aaPredicted RBP17.73■□□□□ 0.43
THUMPD3-210ENST00000515662 TRIM75PA6NK02 468 aa17.73■□□□□ 0.43
THUMPD3-210ENST00000515662 ATP2B1P20020 1258 aa17.73■□□□□ 0.43
THUMPD3-210ENST00000515662 TCP10Q12799 353 aa17.73■□□□□ 0.43
THUMPD3-210ENST00000515662 GPKOWQ92917 476 aaPredicted RBP eCLIP17.73■□□□□ 0.43
THUMPD3-210ENST00000515662 SPZ1Q9BXG8 430 aa17.73■□□□□ 0.43
THUMPD3-210ENST00000515662 BAZ2BQ9UIF8 2168 aaKnown RBP17.72■□□□□ 0.43
THUMPD3-210ENST00000515662 MYH8P13535 1937 aa17.72■□□□□ 0.43
THUMPD3-210ENST00000515662 PTPREP23469 700 aa17.72■□□□□ 0.43
THUMPD3-210ENST00000515662 CALML3P27482 149 aa17.72■□□□□ 0.43
THUMPD3-210ENST00000515662 NOM1Q5C9Z4 860 aaKnown RBP17.72■□□□□ 0.43
THUMPD3-210ENST00000515662 USP17L2Q6R6M4 530 aa17.72■□□□□ 0.43
THUMPD3-210ENST00000515662 NOL7Q9UMY1 257 aaKnown RBP17.72■□□□□ 0.43
THUMPD3-210ENST00000515662 MORC2Q9Y6X9 1032 aaPredicted RBP17.72■□□□□ 0.43
THUMPD3-210ENST00000515662 PSME4Q14997 1843 aa17.72■□□□□ 0.43
THUMPD3-210ENST00000515662 SYKP43405 635 aa17.72■□□□□ 0.43
THUMPD3-210ENST00000515662 CCDC125Q86Z20 511 aa17.72■□□□□ 0.43
THUMPD3-210ENST00000515662 TIGD1Q96MW7 591 aa17.72■□□□□ 0.43
THUMPD3-210ENST00000515662 CBX8Q9HC52 389 aa17.72■□□□□ 0.43
THUMPD3-210ENST00000515662 ZNF277Q9NRM2 450 aaPredicted RBP17.72■□□□□ 0.43
THUMPD3-210ENST00000515662 USP25Q9UHP3 1055 aa17.72■□□□□ 0.43
THUMPD3-210ENST00000515662 DDTLA6NHG4 134 aaPredicted RBP17.71■□□□□ 0.43
THUMPD3-210ENST00000515662 USP17L5A8MUK1 530 aa17.71■□□□□ 0.43
THUMPD3-210ENST00000515662 ADAMTS3O15072 1205 aa17.71■□□□□ 0.43
THUMPD3-210ENST00000515662 ZBTB7AO95365 584 aa17.71■□□□□ 0.43
THUMPD3-210ENST00000515662 CAVIN2O95810 425 aa17.71■□□□□ 0.43
THUMPD3-210ENST00000515662 SMARCA1P28370 1054 aa17.71■□□□□ 0.43
THUMPD3-210ENST00000515662 CFAP100Q494V2 611 aa17.71■□□□□ 0.43
THUMPD3-210ENST00000515662 WWC2Q6AWC2 1192 aa17.71■□□□□ 0.43
THUMPD3-210ENST00000515662 SH3BP5LQ7L8J4 393 aa17.71■□□□□ 0.43
THUMPD3-210ENST00000515662 DNAJC25Q9H1X3 360 aa17.71■□□□□ 0.43
THUMPD3-210ENST00000515662 DNAJC18Q9H819 358 aa17.71■□□□□ 0.43
THUMPD3-210ENST00000515662 COL4A5P29400 1685 aa17.71■□□□□ 0.43
THUMPD3-210ENST00000515662 SIPA1L1O43166 1804 aa17.71■□□□□ 0.43
THUMPD3-210ENST00000515662 SLURP2P0DP57 97 aa17.71■□□□□ 0.42
THUMPD3-210ENST00000515662 STX1AQ16623 288 aa17.71■□□□□ 0.42
THUMPD3-210ENST00000515662 TYW1BQ6NUM6 668 aa17.71■□□□□ 0.42
THUMPD3-210ENST00000515662 CLEC10AQ8IUN9 316 aa17.71■□□□□ 0.42
THUMPD3-210ENST00000515662 LARGE2Q8N3Y3 721 aa17.71■□□□□ 0.42
THUMPD3-210ENST00000515662 SRPRBQ9Y5M8 271 aaKnown RBP17.71■□□□□ 0.42
THUMPD3-210ENST00000515662 TTLL1O95922 423 aa17.7■□□□□ 0.42
THUMPD3-210ENST00000515662 PDHBP11177 359 aa17.7■□□□□ 0.42
THUMPD3-210ENST00000515662 GRIN1Q05586 938 aa17.7■□□□□ 0.42
THUMPD3-210ENST00000515662 RSBN1LQ6PCB5 846 aaPredicted RBP17.7■□□□□ 0.42
THUMPD3-210ENST00000515662 LUZP1Q86V48 1076 aa17.7■□□□□ 0.42
THUMPD3-210ENST00000515662 BLIDQ8IZY5 108 aa17.7■□□□□ 0.42
THUMPD3-210ENST00000515662 ZNF579Q8NAF0 562 aaKnown RBP17.7■□□□□ 0.42
THUMPD3-210ENST00000515662 CPVLQ9H3G5 476 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms