RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 SCG2P13521 617 aa10.95□□□□□ -0.66
TPM3-222ENST00000515609 UBE2HP62256 183 aa10.95□□□□□ -0.66
TPM3-222ENST00000515609 ICA1Q05084 483 aa10.95□□□□□ -0.66
TPM3-222ENST00000515609 GPR162Q16538 588 aa10.95□□□□□ -0.66
TPM3-222ENST00000515609 KLHL40Q2TBA0 621 aa10.95□□□□□ -0.66
TPM3-222ENST00000515609 SUPT20HL1Q3ZLR7 823 aa10.95□□□□□ -0.66
TPM3-222ENST00000515609 DCAF4Q8WV16 495 aa10.95□□□□□ -0.66
TPM3-222ENST00000515609 PHKBQ93100 1093 aa10.95□□□□□ -0.66
TPM3-222ENST00000515609 GLT8D2Q9H1C3 349 aa10.95□□□□□ -0.66
TPM3-222ENST00000515609 SENP2Q9HC62 589 aa10.95□□□□□ -0.66
TPM3-222ENST00000515609 GOPCQ9HD26 462 aa10.95□□□□□ -0.66
TPM3-222ENST00000515609 V9GY48 417 aaPredicted RBP10.95□□□□□ -0.66
TPM3-222ENST00000515609 MYH8P13535 1937 aa10.94□□□□□ -0.66
TPM3-222ENST00000515609 DICER1Q9UPY3 1922 aaKnown RBP10.94□□□□□ -0.66
TPM3-222ENST00000515609 PRPF40AO75400 957 aaKnown RBP10.94□□□□□ -0.66
TPM3-222ENST00000515609 BMP15O95972 392 aa10.94□□□□□ -0.66
TPM3-222ENST00000515609 MMP1P03956 469 aa10.94□□□□□ -0.66
TPM3-222ENST00000515609 AKR1B1P15121 316 aa10.94□□□□□ -0.66
TPM3-222ENST00000515609 ATP2B2Q01814 1243 aa10.94□□□□□ -0.66
TPM3-222ENST00000515609 MAP3K10Q02779 954 aa10.94□□□□□ -0.66
TPM3-222ENST00000515609 RESTQ13127 1097 aa10.94□□□□□ -0.66
TPM3-222ENST00000515609 RASA3Q14644 834 aa10.94□□□□□ -0.66
TPM3-222ENST00000515609 PFKFB3Q16875 520 aaPredicted RBP10.94□□□□□ -0.66
TPM3-222ENST00000515609 NBPF9Q3BBW0 867 aa10.94□□□□□ -0.66
TPM3-222ENST00000515609 RILPL1Q5EBL4 403 aa10.94□□□□□ -0.66
TPM3-222ENST00000515609 KRT40Q6A162 431 aa10.94□□□□□ -0.66
TPM3-222ENST00000515609 MCTP2Q6DN12 878 aa10.94□□□□□ -0.66
TPM3-222ENST00000515609 NBPF11Q86T75 865 aa10.94□□□□□ -0.66
TPM3-222ENST00000515609 RAB11FIP4Q86YS3 637 aa10.94□□□□□ -0.66
TPM3-222ENST00000515609 ZFPM1Q8IX07 1006 aa10.94□□□□□ -0.66
TPM3-222ENST00000515609 GMCL1P1Q8NEA9 526 aa10.94□□□□□ -0.66
TPM3-222ENST00000515609 BICD2Q8TD16 824 aa10.94□□□□□ -0.66
TPM3-222ENST00000515609 SPATA32Q96LK8 384 aa10.94□□□□□ -0.66
TPM3-222ENST00000515609 ADARB2Q9NS39 739 aaKnown RBP10.94□□□□□ -0.66
TPM3-222ENST00000515609 NOL7Q9UMY1 257 aaKnown RBP10.94□□□□□ -0.66
TPM3-222ENST00000515609 CEP131Q9UPN4 1083 aa10.94□□□□□ -0.66
TPM3-222ENST00000515609 IQCA1LA6NCM1 817 aa10.93□□□□□ -0.66
TPM3-222ENST00000515609 SMIM22K7EJ46 135 aa10.93□□□□□ -0.66
TPM3-222ENST00000515609 LETM1O95202 739 aaPredicted RBP10.93□□□□□ -0.66
TPM3-222ENST00000515609 SNHG28P0DPA3 235 aa10.93□□□□□ -0.66
TPM3-222ENST00000515609 PDHBP11177 359 aa10.93□□□□□ -0.66
TPM3-222ENST00000515609 U2AF2P26368 475 aaKnown RBP eCLIP10.93□□□□□ -0.66
TPM3-222ENST00000515609 GNA11P29992 359 aa10.93□□□□□ -0.66
TPM3-222ENST00000515609 FUT2Q10981 343 aa10.93□□□□□ -0.66
TPM3-222ENST00000515609 ILDR2Q71H61 639 aa10.93□□□□□ -0.66
TPM3-222ENST00000515609 SH3BP5LQ7L8J4 393 aa10.93□□□□□ -0.66
TPM3-222ENST00000515609 FERMT3Q86UX7 667 aa10.93□□□□□ -0.66
TPM3-222ENST00000515609 CCDC82Q8N4S0 544 aa10.93□□□□□ -0.66
TPM3-222ENST00000515609 KCNG4Q8TDN1 519 aa10.93□□□□□ -0.66
TPM3-222ENST00000515609 ZC3H15Q8WU90 426 aaKnown RBP10.93□□□□□ -0.66
TPM3-222ENST00000515609 GMCL1Q96IK5 515 aa10.93□□□□□ -0.66
TPM3-222ENST00000515609 DEFB129Q9H1M3 183 aa10.93□□□□□ -0.66
TPM3-222ENST00000515609 MAD2L2Q9UI95 211 aa10.93□□□□□ -0.66
TPM3-222ENST00000515609 PNMA2Q9UL42 364 aa10.93□□□□□ -0.66
TPM3-222ENST00000515609 ISY1Q9ULR0 285 aaKnown RBP10.93□□□□□ -0.66
TPM3-222ENST00000515609 CNTNAP1P78357 1384 aa10.92□□□□□ -0.66
TPM3-222ENST00000515609 CNTNAP5Q8WYK1 1306 aa10.92□□□□□ -0.66
TPM3-222ENST00000515609 ZNF541Q9H0D2 1346 aa10.92□□□□□ -0.66
TPM3-222ENST00000515609 CTNND1O60716 968 aaKnown RBP10.92□□□□□ -0.66
TPM3-222ENST00000515609 YEATS4O95619 227 aa10.92□□□□□ -0.66
TPM3-222ENST00000515609 KRT2P35908 639 aa10.92□□□□□ -0.66
TPM3-222ENST00000515609 CAP2P40123 477 aa10.92□□□□□ -0.66
TPM3-222ENST00000515609 SLC1A4P43007 532 aa10.92□□□□□ -0.66
TPM3-222ENST00000515609 NLRP5P59047 1200 aa10.92□□□□□ -0.66
TPM3-222ENST00000515609 KIF23Q02241 960 aaPredicted RBP10.92□□□□□ -0.66
TPM3-222ENST00000515609 DNM1Q05193 864 aaKnown RBP10.92□□□□□ -0.66
TPM3-222ENST00000515609 ZNF543Q08ER8 600 aa10.92□□□□□ -0.66
TPM3-222ENST00000515609 SF3A1Q15459 793 aaKnown RBP10.92□□□□□ -0.66
TPM3-222ENST00000515609 CCDC96Q2M329 555 aa10.92□□□□□ -0.66
TPM3-222ENST00000515609 TBC1D10BQ4KMP7 808 aaPredicted RBP10.92□□□□□ -0.66
TPM3-222ENST00000515609 C9orf131Q5VYM1 1079 aa10.92□□□□□ -0.66
TPM3-222ENST00000515609 PPP1R18Q6NYC8 613 aa10.92□□□□□ -0.66
TPM3-222ENST00000515609 USP48Q86UV5 1035 aa10.92□□□□□ -0.66
TPM3-222ENST00000515609 NOSTRINQ8IVI9 506 aa10.92□□□□□ -0.66
TPM3-222ENST00000515609 SRBD1Q8N5C6 995 aaKnown RBP10.92□□□□□ -0.66
TPM3-222ENST00000515609 NKX2-3Q8TAU0 364 aa10.92□□□□□ -0.66
TPM3-222ENST00000515609 DCPSQ96C86 337 aaKnown RBP10.92□□□□□ -0.66
TPM3-222ENST00000515609 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.92□□□□□ -0.66
TPM3-222ENST00000515609 ZNF341Q9BYN7 854 aa10.92□□□□□ -0.66
TPM3-222ENST00000515609 AS3MTQ9HBK9 375 aa10.92□□□□□ -0.66
TPM3-222ENST00000515609 C6orf50Q9HD87 102 aa10.92□□□□□ -0.66
TPM3-222ENST00000515609 LMBRD1Q9NUN5 540 aa10.92□□□□□ -0.66
TPM3-222ENST00000515609 POLR3EQ9NVU0 708 aa10.92□□□□□ -0.66
TPM3-222ENST00000515609 HACL1Q9UJ83 578 aa10.92□□□□□ -0.66
TPM3-222ENST00000515609 PCDHAC2Q9Y5I4 1007 aa10.92□□□□□ -0.66
TPM3-222ENST00000515609 ADAMTSL1Q8N6G6 1762 aa10.91□□□□□ -0.66
TPM3-222ENST00000515609 FIBPO43427 364 aa10.91□□□□□ -0.66
TPM3-222ENST00000515609 PLEKHA8P1O95397 391 aa10.91□□□□□ -0.66
TPM3-222ENST00000515609 GH2P01242 217 aa10.91□□□□□ -0.66
TPM3-222ENST00000515609 EEF2P13639 858 aaKnown RBP10.91□□□□□ -0.66
TPM3-222ENST00000515609 NF2P35240 595 aa10.91□□□□□ -0.66
TPM3-222ENST00000515609 TRAPPC10P48553 1259 aa10.91□□□□□ -0.66
TPM3-222ENST00000515609 GUCY1B3Q02153 619 aa10.91□□□□□ -0.66
TPM3-222ENST00000515609 EVX2Q03828 476 aa10.91□□□□□ -0.66
TPM3-222ENST00000515609 SEPT2Q15019 361 aa10.91□□□□□ -0.66
TPM3-222ENST00000515609 MYSM1Q5VVJ2 828 aa10.91□□□□□ -0.66
TPM3-222ENST00000515609 USP50Q70EL3 339 aaPredicted RBP10.91□□□□□ -0.66
TPM3-222ENST00000515609 SAMD7Q7Z3H4 446 aa10.91□□□□□ -0.66
TPM3-222ENST00000515609 SULF1Q8IWU6 871 aa10.91□□□□□ -0.66
TPM3-222ENST00000515609 DIS3L2Q8IYB7 885 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms