RNA–Protein interactions for RNA: ENST00000515588.1

SERF1B-208, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2 BASIC

Gene SERF1B, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-208ENST00000515588 VCPKMTQ9H867 229 aa18.76■□□□□ 0.59
SERF1B-208ENST00000515588 CCDC171Q6TFL3 1326 aa18.75■□□□□ 0.59
SERF1B-208ENST00000515588 DOCK3Q8IZD9 2030 aa18.75■□□□□ 0.59
SERF1B-208ENST00000515588 FGAP02671 866 aa18.75■□□□□ 0.59
SERF1B-208ENST00000515588 HSPD1P10809 573 aaKnown RBP18.75■□□□□ 0.59
SERF1B-208ENST00000515588 FLT3LGP49771 235 aa18.75■□□□□ 0.59
SERF1B-208ENST00000515588 CTDSPL2Q05D32 466 aa18.75■□□□□ 0.59
SERF1B-208ENST00000515588 CWC27Q6UX04 472 aaKnown RBP18.75■□□□□ 0.59
SERF1B-208ENST00000515588 ZNF444Q8N0Y2 327 aaPredicted RBP18.75■□□□□ 0.59
SERF1B-208ENST00000515588 GPRC5AQ8NFJ5 357 aa18.75■□□□□ 0.59
SERF1B-208ENST00000515588 LPAR1Q92633 364 aa18.75■□□□□ 0.59
SERF1B-208ENST00000515588 PAGR1Q9BTK6 254 aa18.75■□□□□ 0.59
SERF1B-208ENST00000515588 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.75■□□□□ 0.59
SERF1B-208ENST00000515588 SPDYE16A6NNV3 312 aaPredicted RBP18.74■□□□□ 0.59
SERF1B-208ENST00000515588 ERVK-9P63128 1117 aa18.74■□□□□ 0.59
SERF1B-208ENST00000515588 ERVK-24P63145 666 aa18.74■□□□□ 0.59
SERF1B-208ENST00000515588 PDE4BQ07343 736 aa18.74■□□□□ 0.59
SERF1B-208ENST00000515588 FAM47AQ5JRC9 791 aa18.74■□□□□ 0.59
SERF1B-208ENST00000515588 LBX2Q6XYB7 198 aa18.74■□□□□ 0.59
SERF1B-208ENST00000515588 RAET1EQ8TD07 263 aa18.74■□□□□ 0.59
SERF1B-208ENST00000515588 SH2D4AQ9H788 454 aa18.74■□□□□ 0.59
SERF1B-208ENST00000515588 ZNF287Q9HBT7 754 aa18.74■□□□□ 0.59
SERF1B-208ENST00000515588 ANAPC4Q9UJX5 808 aa18.74■□□□□ 0.59
SERF1B-208ENST00000515588 RABGAP1Q9Y3P9 1069 aa18.74■□□□□ 0.59
SERF1B-208ENST00000515588 MKI67P46013 3256 aaKnown RBP18.73■□□□□ 0.59
SERF1B-208ENST00000515588 KIAA0100Q14667 2235 aaKnown RBP18.73■□□□□ 0.59
SERF1B-208ENST00000515588 SLC3A2P08195 630 aaKnown RBP18.73■□□□□ 0.59
SERF1B-208ENST00000515588 GTF3C2Q8WUA4 911 aaPredicted RBP18.73■□□□□ 0.59
SERF1B-208ENST00000515588 COA7Q96BR5 231 aa18.73■□□□□ 0.59
SERF1B-208ENST00000515588 CEP95Q96GE4 821 aa18.73■□□□□ 0.59
SERF1B-208ENST00000515588 PORCNQ9H237 461 aa18.73■□□□□ 0.59
SERF1B-208ENST00000515588 DIAPH3Q9NSV4 1193 aa18.73■□□□□ 0.59
SERF1B-208ENST00000515588 BTBD7Q9P203 1132 aa18.73■□□□□ 0.59
SERF1B-208ENST00000515588 NYAP2Q9P242 653 aa18.73■□□□□ 0.59
SERF1B-208ENST00000515588 GJD2Q9UKL4 321 aa18.73■□□□□ 0.59
SERF1B-208ENST00000515588 POTEFA5A3E0 1075 aa18.72■□□□□ 0.59
SERF1B-208ENST00000515588 MYCP01106 439 aaPredicted RBP18.72■□□□□ 0.59
SERF1B-208ENST00000515588 GRK4P32298 578 aa18.72■□□□□ 0.59
SERF1B-208ENST00000515588 TFAP4Q01664 338 aa18.72■□□□□ 0.59
SERF1B-208ENST00000515588 COG2Q14746 738 aa18.72■□□□□ 0.59
SERF1B-208ENST00000515588 NBPF11Q86T75 865 aa18.72■□□□□ 0.59
SERF1B-208ENST00000515588 NEDD1Q8NHV4 660 aa18.72■□□□□ 0.59
SERF1B-208ENST00000515588 TANGO6Q9C0B7 1094 aa18.72■□□□□ 0.59
SERF1B-208ENST00000515588 IL25Q9H293 177 aa18.72■□□□□ 0.59
SERF1B-208ENST00000515588 MTMR4Q9NYA4 1195 aa18.72■□□□□ 0.59
SERF1B-208ENST00000515588 RLFQ13129 1914 aa18.72■□□□□ 0.59
SERF1B-208ENST00000515588 PLIN4Q96Q06 1357 aa18.71■□□□□ 0.59
SERF1B-208ENST00000515588 HIP1O00291 1037 aa18.71■□□□□ 0.59
SERF1B-208ENST00000515588 WDR46O15213 610 aaKnown RBP18.71■□□□□ 0.59
SERF1B-208ENST00000515588 FGRP09769 529 aa18.71■□□□□ 0.59
SERF1B-208ENST00000515588 TSPY3P0CV98 308 aa18.71■□□□□ 0.59
SERF1B-208ENST00000515588 TSPY8P0CW00 308 aa18.71■□□□□ 0.59
SERF1B-208ENST00000515588 IRF5Q13568 498 aa18.71■□□□□ 0.59
SERF1B-208ENST00000515588 NBPF3Q9H094 633 aa18.71■□□□□ 0.59
SERF1B-208ENST00000515588 GOPCQ9HD26 462 aa18.71■□□□□ 0.59
SERF1B-208ENST00000515588 CLIP2Q9UDT6 1046 aa18.71■□□□□ 0.59
SERF1B-208ENST00000515588 ZMYM6O95789 1325 aa18.71■□□□□ 0.59
SERF1B-208ENST00000515588 TNRC18O15417 2968 aaPredicted RBP18.7■□□□□ 0.58
SERF1B-208ENST00000515588 ELNP15502 786 aa18.7■□□□□ 0.58
SERF1B-208ENST00000515588 DSG3P32926 999 aa18.7■□□□□ 0.58
SERF1B-208ENST00000515588 MKL1Q969V6 931 aa18.7■□□□□ 0.58
SERF1B-208ENST00000515588 HOXC10Q9NYD6 342 aa18.7■□□□□ 0.58
SERF1B-208ENST00000515588 F5H6K3 240 aa18.69■□□□□ 0.58
SERF1B-208ENST00000515588 ORC4O43929 436 aa18.69■□□□□ 0.58
SERF1B-208ENST00000515588 RAD21O60216 631 aa18.69■□□□□ 0.58
SERF1B-208ENST00000515588 ADCY3O60266 1144 aa18.69■□□□□ 0.58
SERF1B-208ENST00000515588 FLOT1O75955 427 aa18.69■□□□□ 0.58
SERF1B-208ENST00000515588 MAPK4P31152 587 aa18.69■□□□□ 0.58
SERF1B-208ENST00000515588 MFAP1P55081 439 aaKnown RBP18.69■□□□□ 0.58
SERF1B-208ENST00000515588 HAND2P61296 217 aa18.69■□□□□ 0.58
SERF1B-208ENST00000515588 KLRC3Q07444 240 aa18.69■□□□□ 0.58
SERF1B-208ENST00000515588 MTFR1Q15390 333 aa18.69■□□□□ 0.58
SERF1B-208ENST00000515588 FAM83BQ5T0W9 1011 aa18.69■□□□□ 0.58
SERF1B-208ENST00000515588 GPR142Q7Z601 462 aa18.69■□□□□ 0.58
SERF1B-208ENST00000515588 SKAP1Q86WV1 359 aa18.69■□□□□ 0.58
SERF1B-208ENST00000515588 SLAIN1Q8ND83 568 aa18.69■□□□□ 0.58
SERF1B-208ENST00000515588 NUP88Q99567 741 aaPredicted RBP18.69■□□□□ 0.58
SERF1B-208ENST00000515588 IL17RBQ9NRM6 502 aa18.69■□□□□ 0.58
SERF1B-208ENST00000515588 FBXO28Q9NVF7 368 aa18.69■□□□□ 0.58
SERF1B-208ENST00000515588 NMT2O60551 498 aa18.68■□□□□ 0.58
SERF1B-208ENST00000515588 TTLL1O95922 423 aa18.68■□□□□ 0.58
SERF1B-208ENST00000515588 NDUFB10O96000 172 aa18.68■□□□□ 0.58
SERF1B-208ENST00000515588 TBC1D10CQ8IV04 446 aa18.68■□□□□ 0.58
SERF1B-208ENST00000515588 LRRC47Q8N1G4 583 aaKnown RBP18.68■□□□□ 0.58
SERF1B-208ENST00000515588 NKX2-3Q8TAU0 364 aa18.68■□□□□ 0.58
SERF1B-208ENST00000515588 PXYLP1Q8TE99 480 aa18.68■□□□□ 0.58
SERF1B-208ENST00000515588 ATG4CQ96DT6 458 aa18.68■□□□□ 0.58
SERF1B-208ENST00000515588 PLXNB2O15031 1838 aa18.67■□□□□ 0.58
SERF1B-208ENST00000515588 RANBP6O60518 1105 aaKnown RBP18.67■□□□□ 0.58
SERF1B-208ENST00000515588 MLLT1Q03111 559 aaPredicted RBP18.67■□□□□ 0.58
SERF1B-208ENST00000515588 MORN1Q5T089 497 aa18.67■□□□□ 0.58
SERF1B-208ENST00000515588 SAMD1Q6SPF0 538 aaPredicted RBP18.67■□□□□ 0.58
SERF1B-208ENST00000515588 PLEKHH3Q7Z736 793 aa18.67■□□□□ 0.58
SERF1B-208ENST00000515588 USP6NLQ92738 828 aa18.67■□□□□ 0.58
SERF1B-208ENST00000515588 ADAMTS5Q9UNA0 930 aa18.67■□□□□ 0.58
SERF1B-208ENST00000515588 TSPY2A6NKD2 308 aa18.66■□□□□ 0.58
SERF1B-208ENST00000515588 EN2P19622 333 aaPredicted RBP18.66■□□□□ 0.58
SERF1B-208ENST00000515588 CHMLP26374 656 aa18.66■□□□□ 0.58
SERF1B-208ENST00000515588 CCNA1P78396 465 aa18.66■□□□□ 0.58
SERF1B-208ENST00000515588 CENPQQ7L2Z9 268 aaPredicted RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms