RNA–Protein interactions for RNA: ENST00000514660.1

NEDD9-215, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-215ENST00000514660 CD320Q9NPF0 282 aa13.07□□□□□ -0.32
NEDD9-215ENST00000514660 TMEM39AQ9NV64 488 aa13.07□□□□□ -0.32
NEDD9-215ENST00000514660 A0A0G2JMZ2 1700 aa13.07□□□□□ -0.32
NEDD9-215ENST00000514660 LRRC37A2A6NM11 1700 aa13.07□□□□□ -0.32
NEDD9-215ENST00000514660 GLRX3O76003 335 aaKnown RBP13.06□□□□□ -0.32
NEDD9-215ENST00000514660 GH2P01242 217 aa13.06□□□□□ -0.32
NEDD9-215ENST00000514660 CCNA1P78396 465 aa13.06□□□□□ -0.32
NEDD9-215ENST00000514660 ANKRD33Q7Z3H0 272 aa13.06□□□□□ -0.32
NEDD9-215ENST00000514660 WDR63Q8IWG1 891 aa13.06□□□□□ -0.32
NEDD9-215ENST00000514660 MRPL50Q8N5N7 158 aaKnown RBP13.06□□□□□ -0.32
NEDD9-215ENST00000514660 SLC44A5Q8NCS7 719 aa13.06□□□□□ -0.32
NEDD9-215ENST00000514660 XAGE2Q96GT9 111 aa13.06□□□□□ -0.32
NEDD9-215ENST00000514660 HCN4Q9Y3Q4 1203 aa13.06□□□□□ -0.32
NEDD9-215ENST00000514660 TIMP1P01033 207 aa13.05□□□□□ -0.32
NEDD9-215ENST00000514660 MYOGP15173 224 aa13.05□□□□□ -0.32
NEDD9-215ENST00000514660 CSF2RAP15509 400 aa13.05□□□□□ -0.32
NEDD9-215ENST00000514660 TMEM31Q5JXX7 168 aa13.05□□□□□ -0.32
NEDD9-215ENST00000514660 SPTY2D1Q68D10 685 aaPredicted RBP13.05□□□□□ -0.32
NEDD9-215ENST00000514660 CCDC129Q6ZRS4 1044 aa13.05□□□□□ -0.32
NEDD9-215ENST00000514660 ZNF365Q70YC5 407 aa13.05□□□□□ -0.32
NEDD9-215ENST00000514660 DPP9Q86TI2 863 aa13.05□□□□□ -0.32
NEDD9-215ENST00000514660 TGFBRAP1Q8WUH2 860 aa13.05□□□□□ -0.32
NEDD9-215ENST00000514660 SAP30BPQ9UHR5 308 aaKnown RBP13.05□□□□□ -0.32
NEDD9-215ENST00000514660 IVNS1ABPQ9Y6Y0 642 aa13.05□□□□□ -0.32
NEDD9-215ENST00000514660 FLT1P17948 1338 aa13.05□□□□□ -0.32
NEDD9-215ENST00000514660 A0A1B0GUL7 405 aa13.04□□□□□ -0.32
NEDD9-215ENST00000514660 RFXAPO00287 272 aa13.04□□□□□ -0.32
NEDD9-215ENST00000514660 TLL1O43897 1013 aa13.04□□□□□ -0.32
NEDD9-215ENST00000514660 ADAMTS4O75173 837 aa13.04□□□□□ -0.32
NEDD9-215ENST00000514660 MAP4K4O95819 1239 aaPredicted RBP13.04□□□□□ -0.32
NEDD9-215ENST00000514660 ERCC3P19447 782 aa13.04□□□□□ -0.32
NEDD9-215ENST00000514660 GUCY1A2P33402 732 aa13.04□□□□□ -0.32
NEDD9-215ENST00000514660 KIAA1755Q5JYT7 1200 aa13.04□□□□□ -0.32
NEDD9-215ENST00000514660 KRT40Q6A162 431 aa13.04□□□□□ -0.32
NEDD9-215ENST00000514660 MFSD5Q6N075 450 aa13.04□□□□□ -0.32
NEDD9-215ENST00000514660 FOXP4Q8IVH2 680 aaPredicted RBP13.04□□□□□ -0.32
NEDD9-215ENST00000514660 MAML3Q96JK9 1138 aa13.04□□□□□ -0.32
NEDD9-215ENST00000514660 XPNPEP3Q9NQH7 507 aa13.04□□□□□ -0.32
NEDD9-215ENST00000514660 AATFQ9NY61 560 aaKnown RBP eCLIP13.04□□□□□ -0.32
NEDD9-215ENST00000514660 FBXO3Q9UK99 471 aa13.04□□□□□ -0.32
NEDD9-215ENST00000514660 PARP14Q460N5 1801 aa13.04□□□□□ -0.32
NEDD9-215ENST00000514660 MYH1P12882 1939 aa13.03□□□□□ -0.32
NEDD9-215ENST00000514660 MYADML2A6NDP7 307 aa13.03□□□□□ -0.32
NEDD9-215ENST00000514660 GPR37L1O60883 481 aa13.03□□□□□ -0.32
NEDD9-215ENST00000514660 RABGGTBP53611 331 aa13.03□□□□□ -0.32
NEDD9-215ENST00000514660 CCSAPQ6IQ19 270 aaPredicted RBP13.03□□□□□ -0.32
NEDD9-215ENST00000514660 MICALL1Q8N3F8 863 aa13.03□□□□□ -0.32
NEDD9-215ENST00000514660 VWCEQ96DN2 955 aa13.03□□□□□ -0.32
NEDD9-215ENST00000514660 TOX2Q96NM4 488 aa13.03□□□□□ -0.32
NEDD9-215ENST00000514660 KIAA1683Q9H0B3 1180 aa13.03□□□□□ -0.32
NEDD9-215ENST00000514660 DHX36Q9H2U1 1008 aaKnown RBP13.03□□□□□ -0.32
NEDD9-215ENST00000514660 RPAP3Q9H6T3 665 aaPredicted RBP13.03□□□□□ -0.32
NEDD9-215ENST00000514660 EPOPA6NHQ4 379 aa13.02□□□□□ -0.33
NEDD9-215ENST00000514660 LDHCP07864 332 aa13.02□□□□□ -0.33
NEDD9-215ENST00000514660 ZNF865P0CJ78 1059 aaPredicted RBP13.02□□□□□ -0.33
NEDD9-215ENST00000514660 IL15P40933 162 aaPredicted RBP13.02□□□□□ -0.33
NEDD9-215ENST00000514660 MCAMP43121 646 aa13.02□□□□□ -0.33
NEDD9-215ENST00000514660 EVX2Q03828 476 aa13.02□□□□□ -0.33
NEDD9-215ENST00000514660 TFCP2Q12800 502 aa13.02□□□□□ -0.33
NEDD9-215ENST00000514660 TATDN1Q6P1N9 297 aa13.02□□□□□ -0.33
NEDD9-215ENST00000514660 SPATA5Q8NB90 893 aa13.02□□□□□ -0.33
NEDD9-215ENST00000514660 IL27Q8NEV9 243 aa13.02□□□□□ -0.33
NEDD9-215ENST00000514660 SPATC1LQ9H0A9 340 aa13.02□□□□□ -0.33
NEDD9-215ENST00000514660 GINM1Q9NU53 330 aa13.02□□□□□ -0.33
NEDD9-215ENST00000514660 RAI14Q9P0K7 980 aa13.02□□□□□ -0.33
NEDD9-215ENST00000514660 COL11A1P12107 1806 aaPredicted RBP13.02□□□□□ -0.33
NEDD9-215ENST00000514660 A0A1W2PRG0 241 aa13.01□□□□□ -0.33
NEDD9-215ENST00000514660 ERC2O15083 957 aa13.01□□□□□ -0.33
NEDD9-215ENST00000514660 MRE11P49959 708 aa13.01□□□□□ -0.33
NEDD9-215ENST00000514660 CDK7P50613 346 aa13.01□□□□□ -0.33
NEDD9-215ENST00000514660 ACLYP53396 1101 aa13.01□□□□□ -0.33
NEDD9-215ENST00000514660 PPP4CP60510 307 aa13.01□□□□□ -0.33
NEDD9-215ENST00000514660 DYNLL1P63167 89 aaKnown RBP13.01□□□□□ -0.33
NEDD9-215ENST00000514660 CRACR2BQ8N4Y2 399 aaPredicted RBP13.01□□□□□ -0.33
NEDD9-215ENST00000514660 KLHDC9Q8NEP7 349 aa13.01□□□□□ -0.33
NEDD9-215ENST00000514660 CDCA7LQ96GN5 454 aa13.01□□□□□ -0.33
NEDD9-215ENST00000514660 FEZ1Q99689 392 aa13.01□□□□□ -0.33
NEDD9-215ENST00000514660 PPP1R12CQ9BZL4 782 aa13.01□□□□□ -0.33
NEDD9-215ENST00000514660 COPRSQ9NQ92 184 aa13.01□□□□□ -0.33
NEDD9-215ENST00000514660 UMODL1Q5DID0 1318 aa13.01□□□□□ -0.33
NEDD9-215ENST00000514660 BRWD1Q9NSI6 2320 aa13.01□□□□□ -0.33
NEDD9-215ENST00000514660 ADCY6O43306 1168 aa13□□□□□ -0.33
NEDD9-215ENST00000514660 STRNO43815 780 aa13□□□□□ -0.33
NEDD9-215ENST00000514660 ARHGEF15O94989 841 aa13□□□□□ -0.33
NEDD9-215ENST00000514660 PGK2P07205 417 aa13□□□□□ -0.33
NEDD9-215ENST00000514660 RARBP10826 455 aa13□□□□□ -0.33
NEDD9-215ENST00000514660 GSTO1P78417 241 aa13□□□□□ -0.33
NEDD9-215ENST00000514660 PPIGQ13427 754 aaKnown RBP eCLIP13□□□□□ -0.33
NEDD9-215ENST00000514660 HERVK_113Q902F9 699 aa13□□□□□ -0.33
NEDD9-215ENST00000514660 ROBO3Q96MS0 1386 aa12.99□□□□□ -0.33
NEDD9-215ENST00000514660 DCDC2CA8MYV0 355 aa12.99□□□□□ -0.33
NEDD9-215ENST00000514660 ARID4AP29374 1257 aaPredicted RBP12.99□□□□□ -0.33
NEDD9-215ENST00000514660 CYP2C18P33260 490 aa12.99□□□□□ -0.33
NEDD9-215ENST00000514660 SHCBP1Q8NEM2 672 aa12.99□□□□□ -0.33
NEDD9-215ENST00000514660 STARD7Q9NQZ5 370 aa12.99□□□□□ -0.33
NEDD9-215ENST00000514660 MSRAQ9UJ68 235 aa12.99□□□□□ -0.33
NEDD9-215ENST00000514660 MTCH2Q9Y6C9 303 aa12.99□□□□□ -0.33
NEDD9-215ENST00000514660 TRANK1O15050 2925 aa12.99□□□□□ -0.33
NEDD9-215ENST00000514660 SYNRGQ9UMZ2 1314 aa12.98□□□□□ -0.33
NEDD9-215ENST00000514660 PI4K2BG5E9Z4 385 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms