RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 PRPF38AQ8NAV1 312 aaKnown RBP7.21□□□□□ -1.26
RFC1-216ENST00000514572 DNAJB8Q8NHS0 232 aa7.21□□□□□ -1.26
RFC1-216ENST00000514572 CHAC2Q8WUX2 184 aa7.21□□□□□ -1.26
RFC1-216ENST00000514572 CLUHP3Q96NS8 147 aa7.21□□□□□ -1.26
RFC1-216ENST00000514572 RNF208Q9H0X6 261 aa7.21□□□□□ -1.26
RFC1-216ENST00000514572 PICK1Q9NRD5 415 aa7.21□□□□□ -1.26
RFC1-216ENST00000514572 ATP8A1Q9Y2Q0 1164 aa7.21□□□□□ -1.26
RFC1-216ENST00000514572 TRBV23-1A0A0A0MS06 115 aa7.2□□□□□ -1.26
RFC1-216ENST00000514572 KRBA1A5PL33 1030 aa7.2□□□□□ -1.26
RFC1-216ENST00000514572 RAPGEF3O95398 923 aa7.2□□□□□ -1.26
RFC1-216ENST00000514572 CELA2BP08218 269 aaPredicted RBP7.2□□□□□ -1.26
RFC1-216ENST00000514572 MYCLP1P12525 358 aaPredicted RBP7.2□□□□□ -1.26
RFC1-216ENST00000514572 TRIM61Q5EBN2 209 aa7.2□□□□□ -1.26
RFC1-216ENST00000514572 DCAF15Q66K64 600 aa7.2□□□□□ -1.26
RFC1-216ENST00000514572 HEATR6Q6AI08 1181 aaKnown RBP7.2□□□□□ -1.26
RFC1-216ENST00000514572 SCUBE1Q8IWY4 988 aa7.2□□□□□ -1.26
RFC1-216ENST00000514572 C2CD4AQ8NCU7 369 aaPredicted RBP7.2□□□□□ -1.26
RFC1-216ENST00000514572 OSBP2Q969R2 916 aa7.2□□□□□ -1.26
RFC1-216ENST00000514572 TRIM11Q96F44 468 aa7.2□□□□□ -1.26
RFC1-216ENST00000514572 MRGPRX3Q96LB0 322 aa7.2□□□□□ -1.26
RFC1-216ENST00000514572 APBA2Q99767 749 aa7.2□□□□□ -1.26
RFC1-216ENST00000514572 CAAP1Q9H8G2 361 aa7.2□□□□□ -1.26
RFC1-216ENST00000514572 AP4E1Q9UPM8 1137 aa7.2□□□□□ -1.26
RFC1-216ENST00000514572 DNAJC25-GNG10A0A024R161 153 aa7.19□□□□□ -1.26
RFC1-216ENST00000514572 PDE8AO60658 829 aa7.19□□□□□ -1.26
RFC1-216ENST00000514572 TP53P04637 393 aaPredicted RBP7.19□□□□□ -1.26
RFC1-216ENST00000514572 C6orf222P0C671 652 aaPredicted RBP7.19□□□□□ -1.26
RFC1-216ENST00000514572 GRIA2P42262 883 aa7.19□□□□□ -1.26
RFC1-216ENST00000514572 NBPF12Q5TAG4 269 aaPredicted RBP7.19□□□□□ -1.26
RFC1-216ENST00000514572 NUTM2GQ5VZR2 741 aa7.19□□□□□ -1.26
RFC1-216ENST00000514572 LYPD4Q6UWN0 246 aa7.19□□□□□ -1.26
RFC1-216ENST00000514572 IER2Q9BTL4 223 aa7.19□□□□□ -1.26
RFC1-216ENST00000514572 FOXQ1Q9C009 403 aa7.19□□□□□ -1.26
RFC1-216ENST00000514572 CYP4F12Q9HCS2 524 aa7.19□□□□□ -1.26
RFC1-216ENST00000514572 FAM105AQ9NUU6 356 aa7.19□□□□□ -1.26
RFC1-216ENST00000514572 INTS7Q9NVH2 962 aaKnown RBP7.19□□□□□ -1.26
RFC1-216ENST00000514572 FAM86C1Q9NVL1 165 aa7.19□□□□□ -1.26
RFC1-216ENST00000514572 MAPRE3Q9UPY8 281 aa7.19□□□□□ -1.26
RFC1-216ENST00000514572 ACTL7BQ9Y614 415 aa7.19□□□□□ -1.26
RFC1-216ENST00000514572 TBX1O43435 398 aa7.18□□□□□ -1.26
RFC1-216ENST00000514572 LRIG2O94898 1065 aa7.18□□□□□ -1.26
RFC1-216ENST00000514572 S100BP04271 92 aaPredicted RBP7.18□□□□□ -1.26
RFC1-216ENST00000514572 PABPC1P11940 636 aaKnown RBP7.18□□□□□ -1.26
RFC1-216ENST00000514572 GBP1P32455 592 aa7.18□□□□□ -1.26
RFC1-216ENST00000514572 ACAD11Q709F0 780 aa7.18□□□□□ -1.26
RFC1-216ENST00000514572 NOL8Q76FK4 1167 aaKnown RBP7.18□□□□□ -1.26
RFC1-216ENST00000514572 ARMCX6Q7L4S7 300 aa7.18□□□□□ -1.26
RFC1-216ENST00000514572 AFAP1L2Q8N4X5 818 aa7.18□□□□□ -1.26
RFC1-216ENST00000514572 RCC1LQ96I51 464 aaKnown RBP7.18□□□□□ -1.26
RFC1-216ENST00000514572 CDC6Q99741 560 aa7.18□□□□□ -1.26
RFC1-216ENST00000514572 LGR4Q9BXB1 951 aa7.18□□□□□ -1.26
RFC1-216ENST00000514572 WHRNQ9P202 907 aa7.18□□□□□ -1.26
RFC1-216ENST00000514572 ZNF451Q9Y4E5 1061 aa7.18□□□□□ -1.26
RFC1-216ENST00000514572 DRD2P14416 443 aa7.17□□□□□ -1.26
RFC1-216ENST00000514572 SDSP20132 328 aa7.17□□□□□ -1.26
RFC1-216ENST00000514572 CD247P20963 164 aa7.17□□□□□ -1.26
RFC1-216ENST00000514572 AMPD1P23109 780 aa7.17□□□□□ -1.26
RFC1-216ENST00000514572 SOX5P35711 763 aa7.17□□□□□ -1.26
RFC1-216ENST00000514572 SUMO1P63165 101 aaKnown RBP7.17□□□□□ -1.26
RFC1-216ENST00000514572 TRAPPC3LQ5T215 181 aa7.17□□□□□ -1.26
RFC1-216ENST00000514572 CCDC181Q5TID7 509 aa7.17□□□□□ -1.26
RFC1-216ENST00000514572 LINC00114Q6XXX2 140 aa7.17□□□□□ -1.26
RFC1-216ENST00000514572 CDC37L1Q7L3B6 337 aa7.17□□□□□ -1.26
RFC1-216ENST00000514572 DDX42Q86XP3 938 aaKnown RBP eCLIP7.17□□□□□ -1.26
RFC1-216ENST00000514572 C7orf61Q8IZ16 206 aa7.17□□□□□ -1.26
RFC1-216ENST00000514572 MFSD2AQ8NA29 543 aa7.17□□□□□ -1.26
RFC1-216ENST00000514572 LRRN4CLQ8ND94 238 aa7.17□□□□□ -1.26
RFC1-216ENST00000514572 GSTCDQ8NEC7 633 aa7.17□□□□□ -1.26
RFC1-216ENST00000514572 ZNF512BQ96KM6 892 aaPredicted RBP7.17□□□□□ -1.26
RFC1-216ENST00000514572 FGD4Q96M96 766 aa7.17□□□□□ -1.26
RFC1-216ENST00000514572 TARS2Q9BW92 718 aaKnown RBP7.17□□□□□ -1.26
RFC1-216ENST00000514572 TRIM39Q9HCM9 518 aa7.17□□□□□ -1.26
RFC1-216ENST00000514572 HOMER2Q9NSB8 354 aa7.17□□□□□ -1.26
RFC1-216ENST00000514572 EMC9Q9Y3B6 208 aa7.17□□□□□ -1.26
RFC1-216ENST00000514572 POU3F2P20265 443 aaPredicted RBP7.16□□□□□ -1.26
RFC1-216ENST00000514572 PMLP29590 882 aa7.16□□□□□ -1.26
RFC1-216ENST00000514572 RAC1P63000 192 aa7.16□□□□□ -1.26
RFC1-216ENST00000514572 IGF2-ASQ6U949 168 aa7.16□□□□□ -1.26
RFC1-216ENST00000514572 Q6ZS46 218 aa7.16□□□□□ -1.26
RFC1-216ENST00000514572 LRRTM3Q86VH5 581 aa7.16□□□□□ -1.26
RFC1-216ENST00000514572 TRIM59Q8IWR1 403 aa7.16□□□□□ -1.26
RFC1-216ENST00000514572 CCDC144CPQ8IYA2 1237 aa7.16□□□□□ -1.26
RFC1-216ENST00000514572 SMYD4Q8IYR2 804 aaPredicted RBP7.16□□□□□ -1.26
RFC1-216ENST00000514572 ARHGEF39Q8N4T4 335 aa7.16□□□□□ -1.26
RFC1-216ENST00000514572 BVESQ8NE79 360 aa7.16□□□□□ -1.26
RFC1-216ENST00000514572 WHAMMQ8TF30 809 aa7.16□□□□□ -1.26
RFC1-216ENST00000514572 PSMG3-AS1Q96PY0 264 aa7.16□□□□□ -1.26
RFC1-216ENST00000514572 CHMP4AQ9BY43 222 aa7.16□□□□□ -1.26
RFC1-216ENST00000514572 GBP3Q9H0R5 595 aa7.16□□□□□ -1.26
RFC1-216ENST00000514572 MRPL18Q9H0U6 180 aaKnown RBP7.16□□□□□ -1.26
RFC1-216ENST00000514572 ACSS3Q9H6R3 686 aa7.16□□□□□ -1.26
RFC1-216ENST00000514572 CHPF2Q9P2E5 772 aa7.16□□□□□ -1.26
RFC1-216ENST00000514572 MAGEC2Q9UBF1 373 aaPredicted RBP7.16□□□□□ -1.26
RFC1-216ENST00000514572 THRAP3Q9Y2W1 955 aaKnown RBP7.16□□□□□ -1.26
RFC1-216ENST00000514572 A0A087WZG4 1122 aa7.15□□□□□ -1.26
RFC1-216ENST00000514572 SPDYE3A6NKU9 549 aa7.15□□□□□ -1.26
RFC1-216ENST00000514572 DNAJC8O75937 253 aaPredicted RBP7.15□□□□□ -1.26
RFC1-216ENST00000514572 ASPAP45381 313 aa7.15□□□□□ -1.26
RFC1-216ENST00000514572 EXOSC10Q01780 885 aaKnown RBP7.15□□□□□ -1.26
RFC1-216ENST00000514572 AUHQ13825 339 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms